data_6IVX # _model_server_result.job_id YCJfiXPImDfahugtCb_Q-A _model_server_result.datetime_utc '2024-11-14 13:38:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6ivx # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":9000}' # _entry.id 6IVX # _exptl.entry_id 6IVX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 534.432 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(4S)-4-[4'-cyclopropyl-5-(2,2-dimethylpropyl)[3,5'-bi-1,2-oxazol]-3'-yl]-6-[(2,4-dichlorophenyl)amino]-6-oxohexanoic acid" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.01 _cell.angle_gamma 90 _cell.entry_id 6IVX _cell.length_a 79.285 _cell.length_b 72.555 _cell.length_c 98.88 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IVX _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 PISA dimeric 2 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,I,M 1 1 C,D,J,N 2 1 E,F,K,O,P 3 1 G,H,L,Q 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C26 H29 Cl2 N3 O5' _chem_comp.formula_weight 534.432 _chem_comp.id AYO _chem_comp.mon_nstd_flag . _chem_comp.name "(4S)-4-[4'-cyclopropyl-5-(2,2-dimethylpropyl)[3,5'-bi-1,2-oxazol]-3'-yl]-6-[(2,4-dichlorophenyl)amino]-6-oxohexanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O18 C17 AYO doub 70 n n C17 O27 AYO sing 71 n n C17 C7 AYO sing 72 n n C6 C7 AYO sing 73 n n C6 C5 AYO sing 74 n n C4 C5 AYO sing 75 n n C4 C1 AYO sing 76 n n N2 C1 AYO sing 77 n n N2 C19 AYO sing 78 n n C5 C8 AYO sing 79 n n C1 O3 AYO doub 80 n n N9 C8 AYO doub 81 n y N9 O10 AYO sing 82 n y C19 C20 AYO doub 83 n y C19 C24 AYO sing 84 n y CL1 C24 AYO sing 85 n n C20 C21 AYO sing 86 n y C24 C23 AYO doub 87 n y C8 C12 AYO sing 88 n y O10 C11 AYO sing 89 n y C21 C22 AYO doub 90 n y C23 C22 AYO sing 91 n y C22 CL2 AYO sing 92 n n C12 C11 AYO doub 93 n y C12 C13 AYO sing 94 n n C11 C16 AYO sing 95 n n C13 C15 AYO sing 96 n n C13 C14 AYO sing 97 n n C16 N31 AYO doub 98 n y C16 C28 AYO sing 99 n y N31 O30 AYO sing 100 n y C15 C14 AYO sing 101 n n C28 C29 AYO doub 102 n y O30 C29 AYO sing 103 n y C34 C33 AYO sing 104 n n C29 C32 AYO sing 105 n n C35 C33 AYO sing 106 n n C33 C32 AYO sing 107 n n C33 C36 AYO sing 108 n n C4 H1 AYO sing 109 n n C4 H2 AYO sing 110 n n C5 H3 AYO sing 111 n n C6 H4 AYO sing 112 n n C6 H5 AYO sing 113 n n N2 H6 AYO sing 114 n n C7 H7 AYO sing 115 n n C7 H8 AYO sing 116 n n C13 H9 AYO sing 117 n n C14 H10 AYO sing 118 n n C14 H11 AYO sing 119 n n C15 H12 AYO sing 120 n n C15 H13 AYO sing 121 n n O27 H14 AYO sing 122 n n C23 H15 AYO sing 123 n n C21 H16 AYO sing 124 n n C20 H17 AYO sing 125 n n C28 H18 AYO sing 126 n n C32 H19 AYO sing 127 n n C32 H20 AYO sing 128 n n C36 H21 AYO sing 129 n n C36 H22 AYO sing 130 n n C36 H23 AYO sing 131 n n C35 H24 AYO sing 132 n n C35 H25 AYO sing 133 n n C35 H26 AYO sing 134 n n C34 H27 AYO sing 135 n n C34 H28 AYO sing 136 n n C34 H29 AYO sing 137 n n # _atom_sites.entry_id 6IVX _atom_sites.fract_transf_matrix[1][1] 0.012613 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000002 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013783 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010113 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 AYO A 1 9000 9000 AYO MOL . J 3 AYO C 1 9000 9000 AYO MOL . K 3 AYO E 1 9000 9000 AYO MOL . L 3 AYO G 1 9000 9000 AYO MOL . M 4 HOH A 1 9101 9 HOH HOH . M 4 HOH A 2 9102 14 HOH HOH . N 4 HOH C 1 9101 2 HOH HOH . N 4 HOH C 2 9102 8 HOH HOH . N 4 HOH C 3 9103 12 HOH HOH . N 4 HOH C 4 9104 13 HOH HOH . O 4 HOH E 1 9101 10 HOH HOH . O 4 HOH E 2 9102 11 HOH HOH . P 4 HOH F 1 2401 4 HOH HOH . Q 4 HOH G 1 9101 6 HOH HOH . Q 4 HOH G 2 9102 7 HOH HOH . Q 4 HOH G 3 9103 1 HOH HOH . Q 4 HOH G 4 9104 5 HOH HOH . Q 4 HOH G 5 9105 3 HOH HOH . Q 4 HOH G 6 9106 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 AYO . . . K 3 -9.519 -28.529 -44.398 1 44.04 ? C1 AYO 9000 E 1 HETATM 2 C C4 AYO . . . K 3 -10.156 -27.212 -44.029 1 48.61 ? C4 AYO 9000 E 1 HETATM 3 C C5 AYO . . . K 3 -11.06 -26.511 -45.033 1 50.17 ? C5 AYO 9000 E 1 HETATM 4 C C6 AYO . . . K 3 -11.442 -25.124 -44.465 1 54.06 ? C6 AYO 9000 E 1 HETATM 5 N N2 AYO . . . K 3 -10.145 -29.7 -43.978 1 43.87 ? N2 AYO 9000 E 1 HETATM 6 C C7 AYO . . . K 3 -12.086 -24.142 -45.46 1 59.59 ? C7 AYO 9000 E 1 HETATM 7 C C8 AYO . . . K 3 -12.125 -27.517 -45.407 1 59.09 ? C8 AYO 9000 E 1 HETATM 8 C C11 AYO . . . K 3 -13.456 -29.073 -46.306 1 56.72 ? C11 AYO 9000 E 1 HETATM 9 C C12 AYO . . . K 3 -12.282 -28.406 -46.527 1 57.44 ? C12 AYO 9000 E 1 HETATM 10 C C13 AYO . . . K 3 -11.384 -28.55 -47.705 1 44.71 ? C13 AYO 9000 E 1 HETATM 11 C C14 AYO . . . K 3 -10.705 -27.403 -48.401 1 39.22 ? C14 AYO 9000 E 1 HETATM 12 C C15 AYO . . . K 3 -11.867 -28.148 -49.038 1 42.02 ? C15 AYO 9000 E 1 HETATM 13 O O27 AYO . . . K 3 -12.307 -21.755 -45.308 1 77.1 ? O27 AYO 9000 E 1 HETATM 14 C C17 AYO . . . K 3 -12.666 -22.873 -44.784 1 68.31 ? C17 AYO 9000 E 1 HETATM 15 O O18 AYO . . . K 3 -13.449 -23.064 -43.807 1 48.55 ? O18 AYO 9000 E 1 HETATM 16 O O3 AYO . . . K 3 -8.51 -28.453 -45.07 1 44.59 ? O3 AYO 9000 E 1 HETATM 17 C C19 AYO . . . K 3 -9.729 -31.099 -44.084 1 39.1 ? C19 AYO 9000 E 1 HETATM 18 C C24 AYO . . . K 3 -10.726 -32.078 -44.134 1 37.08 ? C24 AYO 9000 E 1 HETATM 19 CL CL1 AYO . . . K 3 -12.386 -31.531 -43.954 1 44.51 ? CL1 AYO 9000 E 1 HETATM 20 C C23 AYO . . . K 3 -10.471 -33.44 -44.281 1 41.55 ? C23 AYO 9000 E 1 HETATM 21 C C22 AYO . . . K 3 -9.165 -33.939 -44.439 1 45.67 ? C22 AYO 9000 E 1 HETATM 22 CL CL2 AYO . . . K 3 -8.895 -35.658 -44.647 1 59.89 ? CL2 AYO 9000 E 1 HETATM 23 C C21 AYO . . . K 3 -8.126 -33.025 -44.396 1 40.31 ? C21 AYO 9000 E 1 HETATM 24 C C20 AYO . . . K 3 -8.434 -31.6 -44.235 1 40.97 ? C20 AYO 9000 E 1 HETATM 25 O O10 AYO . . . K 3 -13.954 -28.659 -45.094 1 59.6 ? O10 AYO 9000 E 1 HETATM 26 N N9 AYO . . . K 3 -13.128 -27.712 -44.531 1 50.86 ? N9 AYO 9000 E 1 HETATM 27 C C16 AYO . . . K 3 -14.083 -30.169 -47.047 1 62.64 ? C16 AYO 9000 E 1 HETATM 28 N N31 AYO . . . K 3 -15.408 -30.396 -47.108 1 62.57 ? N31 AYO 9000 E 1 HETATM 29 O O30 AYO . . . K 3 -15.539 -31.565 -47.837 1 66.65 ? O30 AYO 9000 E 1 HETATM 30 C C29 AYO . . . K 3 -14.296 -32.024 -48.205 1 68.01 ? C29 AYO 9000 E 1 HETATM 31 C C28 AYO . . . K 3 -13.347 -31.189 -47.683 1 64.53 ? C28 AYO 9000 E 1 HETATM 32 C C32 AYO . . . K 3 -14.306 -33.292 -48.956 1 67.72 ? C32 AYO 9000 E 1 HETATM 33 C C33 AYO . . . K 3 -14.213 -34.554 -48.043 1 69.35 ? C33 AYO 9000 E 1 HETATM 34 C C36 AYO . . . K 3 -14.196 -35.817 -48.963 1 63.55 ? C36 AYO 9000 E 1 HETATM 35 C C35 AYO . . . K 3 -15.43 -34.638 -47.125 1 71.56 ? C35 AYO 9000 E 1 HETATM 36 C C34 AYO . . . K 3 -12.955 -34.511 -47.149 1 64.68 ? C34 AYO 9000 E 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 36 #