data_6IVX
#
_model_server_result.job_id            XYBL0CZMeuDYVsWmXrvzBw 
_model_server_result.datetime_utc      '2024-11-14 13:35:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ivx 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":9000}' 
#
_entry.id    6IVX 
#
_exptl.entry_id    6IVX 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              534.432 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(4S)-4-[4'-cyclopropyl-5-(2,2-dimethylpropyl)[3,5'-bi-1,2-oxazol]-3'-yl]-6-[(2,4-dichlorophenyl)amino]-6-oxohexanoic acid" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.01 
_cell.angle_gamma         90 
_cell.entry_id            6IVX 
_cell.length_a            79.285 
_cell.length_b            72.555 
_cell.length_c            98.88 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6IVX 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
PISA dimeric 2 author_and_software_defined_assembly 3 
PISA dimeric 2 author_and_software_defined_assembly 4 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,I,M 1 1 
C,D,J,N 2 1 
E,F,K,O,P 3 1 
G,H,L,Q 4 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
#
_chem_comp.formula           'C26 H29 Cl2 N3 O5' 
_chem_comp.formula_weight    534.432 
_chem_comp.id                AYO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(4S)-4-[4'-cyclopropyl-5-(2,2-dimethylpropyl)[3,5'-bi-1,2-oxazol]-3'-yl]-6-[(2,4-dichlorophenyl)amino]-6-oxohexanoic acid" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O18 C17 AYO doub 70 n n 
C17 O27 AYO sing 71 n n 
C17 C7 AYO sing 72 n n 
C6 C7 AYO sing 73 n n 
C6 C5 AYO sing 74 n n 
C4 C5 AYO sing 75 n n 
C4 C1 AYO sing 76 n n 
N2 C1 AYO sing 77 n n 
N2 C19 AYO sing 78 n n 
C5 C8 AYO sing 79 n n 
C1 O3 AYO doub 80 n n 
N9 C8 AYO doub 81 n y 
N9 O10 AYO sing 82 n y 
C19 C20 AYO doub 83 n y 
C19 C24 AYO sing 84 n y 
CL1 C24 AYO sing 85 n n 
C20 C21 AYO sing 86 n y 
C24 C23 AYO doub 87 n y 
C8 C12 AYO sing 88 n y 
O10 C11 AYO sing 89 n y 
C21 C22 AYO doub 90 n y 
C23 C22 AYO sing 91 n y 
C22 CL2 AYO sing 92 n n 
C12 C11 AYO doub 93 n y 
C12 C13 AYO sing 94 n n 
C11 C16 AYO sing 95 n n 
C13 C15 AYO sing 96 n n 
C13 C14 AYO sing 97 n n 
C16 N31 AYO doub 98 n y 
C16 C28 AYO sing 99 n y 
N31 O30 AYO sing 100 n y 
C15 C14 AYO sing 101 n n 
C28 C29 AYO doub 102 n y 
O30 C29 AYO sing 103 n y 
C34 C33 AYO sing 104 n n 
C29 C32 AYO sing 105 n n 
C35 C33 AYO sing 106 n n 
C33 C32 AYO sing 107 n n 
C33 C36 AYO sing 108 n n 
C4 H1 AYO sing 109 n n 
C4 H2 AYO sing 110 n n 
C5 H3 AYO sing 111 n n 
C6 H4 AYO sing 112 n n 
C6 H5 AYO sing 113 n n 
N2 H6 AYO sing 114 n n 
C7 H7 AYO sing 115 n n 
C7 H8 AYO sing 116 n n 
C13 H9 AYO sing 117 n n 
C14 H10 AYO sing 118 n n 
C14 H11 AYO sing 119 n n 
C15 H12 AYO sing 120 n n 
C15 H13 AYO sing 121 n n 
O27 H14 AYO sing 122 n n 
C23 H15 AYO sing 123 n n 
C21 H16 AYO sing 124 n n 
C20 H17 AYO sing 125 n n 
C28 H18 AYO sing 126 n n 
C32 H19 AYO sing 127 n n 
C32 H20 AYO sing 128 n n 
C36 H21 AYO sing 129 n n 
C36 H22 AYO sing 130 n n 
C36 H23 AYO sing 131 n n 
C35 H24 AYO sing 132 n n 
C35 H25 AYO sing 133 n n 
C35 H26 AYO sing 134 n n 
C34 H27 AYO sing 135 n n 
C34 H28 AYO sing 136 n n 
C34 H29 AYO sing 137 n n 
#
_atom_sites.entry_id                     6IVX 
_atom_sites.fract_transf_matrix[1][1]    0.012613 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000002 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013783 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010113 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 AYO A 1 9000 9000 AYO MOL . 
J 3 AYO C 1 9000 9000 AYO MOL . 
K 3 AYO E 1 9000 9000 AYO MOL . 
L 3 AYO G 1 9000 9000 AYO MOL . 
M 4 HOH A 1 9101 9 HOH HOH . 
M 4 HOH A 2 9102 14 HOH HOH . 
N 4 HOH C 1 9101 2 HOH HOH . 
N 4 HOH C 2 9102 8 HOH HOH . 
N 4 HOH C 3 9103 12 HOH HOH . 
N 4 HOH C 4 9104 13 HOH HOH . 
O 4 HOH E 1 9101 10 HOH HOH . 
O 4 HOH E 2 9102 11 HOH HOH . 
P 4 HOH F 1 2401 4 HOH HOH . 
Q 4 HOH G 1 9101 6 HOH HOH . 
Q 4 HOH G 2 9102 7 HOH HOH . 
Q 4 HOH G 3 9103 1 HOH HOH . 
Q 4 HOH G 4 9104 5 HOH HOH . 
Q 4 HOH G 5 9105 3 HOH HOH . 
Q 4 HOH G 6 9106 15 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 AYO . . . L 3 49.093 -2.205 -23.229 1 48.63 ? C1 AYO 9000 G 1 
HETATM 2 C C4 AYO . . . L 3 49.629 -3.577 -22.752 1 52.77 ? C4 AYO 9000 G 1 
HETATM 3 C C5 AYO . . . L 3 50.557 -4.383 -23.664 1 53.48 ? C5 AYO 9000 G 1 
HETATM 4 C C6 AYO . . . L 3 51.031 -5.796 -23.193 1 57.01 ? C6 AYO 9000 G 1 
HETATM 5 N N2 AYO . . . L 3 49.763 -1.053 -22.795 1 49 ? N2 AYO 9000 G 1 
HETATM 6 C C7 AYO . . . L 3 52.163 -6.383 -24.079 1 52.94 ? C7 AYO 9000 G 1 
HETATM 7 C C8 AYO . . . L 3 51.622 -3.388 -23.93 1 53.27 ? C8 AYO 9000 G 1 
HETATM 8 C C11 AYO . . . L 3 52.945 -1.802 -24.713 1 59.13 ? C11 AYO 9000 G 1 
HETATM 9 C C12 AYO . . . L 3 51.781 -2.463 -24.956 1 55.76 ? C12 AYO 9000 G 1 
HETATM 10 C C13 AYO . . . L 3 50.849 -2.338 -26.09 1 48.56 ? C13 AYO 9000 G 1 
HETATM 11 C C14 AYO . . . L 3 51.563 -2.454 -27.386 1 45.16 ? C14 AYO 9000 G 1 
HETATM 12 C C15 AYO . . . L 3 50.514 -3.462 -27.004 1 45.94 ? C15 AYO 9000 G 1 
HETATM 13 O O27 AYO . . . L 3 51.773 -8.633 -23.422 1 70.69 ? O27 AYO 9000 G 1 
HETATM 14 C C17 AYO . . . L 3 52.654 -7.706 -23.44 1 68.26 ? C17 AYO 9000 G 1 
HETATM 15 O O18 AYO . . . L 3 53.886 -7.718 -23.046 1 74.98 ? O18 AYO 9000 G 1 
HETATM 16 O O3 AYO . . . L 3 48.109 -2.185 -23.934 1 39.85 ? O3 AYO 9000 G 1 
HETATM 17 C C19 AYO . . . L 3 49.395 0.337 -22.866 1 37.76 ? C19 AYO 9000 G 1 
HETATM 18 C C24 AYO . . . L 3 50.379 1.334 -22.864 1 44.63 ? C24 AYO 9000 G 1 
HETATM 19 CL CL1 AYO . . . L 3 52.024 0.852 -22.68 1 53.39 ? CL1 AYO 9000 G 1 
HETATM 20 C C23 AYO . . . L 3 50.126 2.72 -22.977 1 41.21 ? C23 AYO 9000 G 1 
HETATM 21 C C22 AYO . . . L 3 48.841 3.14 -23.162 1 44.95 ? C22 AYO 9000 G 1 
HETATM 22 CL CL2 AYO . . . L 3 48.431 4.801 -23.402 1 56.55 ? CL2 AYO 9000 G 1 
HETATM 23 C C21 AYO . . . L 3 47.818 2.189 -23.183 1 46.02 ? C21 AYO 9000 G 1 
HETATM 24 C C20 AYO . . . L 3 48.117 0.814 -23.052 1 39.24 ? C20 AYO 9000 G 1 
HETATM 25 O O10 AYO . . . L 3 53.434 -2.298 -23.557 1 64.16 ? O10 AYO 9000 G 1 
HETATM 26 N N9 AYO . . . L 3 52.6 -3.28 -23.066 1 47.59 ? N9 AYO 9000 G 1 
HETATM 27 C C16 AYO . . . L 3 53.546 -0.68 -25.452 1 64.25 ? C16 AYO 9000 G 1 
HETATM 28 N N31 AYO . . . L 3 54.879 -0.431 -25.587 1 68 ? N31 AYO 9000 G 1 
HETATM 29 O O30 AYO . . . L 3 54.91 0.748 -26.326 1 64.62 ? O30 AYO 9000 G 1 
HETATM 30 C C29 AYO . . . L 3 53.596 1.149 -26.604 1 60.39 ? C29 AYO 9000 G 1 
HETATM 31 C C28 AYO . . . L 3 52.726 0.28 -26.07 1 51.74 ? C28 AYO 9000 G 1 
HETATM 32 C C32 AYO . . . L 3 53.432 2.403 -27.39 1 62.29 ? C32 AYO 9000 G 1 
HETATM 33 C C33 AYO . . . L 3 53.763 3.718 -26.646 1 52.25 ? C33 AYO 9000 G 1 
HETATM 34 C C36 AYO . . . L 3 54.285 4.733 -27.7 1 56.68 ? C36 AYO 9000 G 1 
HETATM 35 C C35 AYO . . . L 3 54.885 3.553 -25.617 1 60.26 ? C35 AYO 9000 G 1 
HETATM 36 C C34 AYO . . . L 3 52.531 4.262 -25.928 1 51.21 ? C34 AYO 9000 G 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           219 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           36 
#