data_6IW6 # _model_server_result.job_id lMipwjEW-oD4MGyG5M-YbQ _model_server_result.datetime_utc '2024-12-14 05:14:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iw6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":1007}' # _entry.id 6IW6 # _exptl.entry_id 6IW6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IW6 _cell.length_a 113.27 _cell.length_b 127.83 _cell.length_c 168.8 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IW6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 24 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,Q 1 1 B,I,J,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 55 A CYS 306 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc2 A SG CYS 58 A CYS 309 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.429 ? metalc ? metalc3 A NE2 HIS 71 A HIS 322 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc4 A ND1 HIS 77 A HIS 328 1_555 C ZN ZN . A ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.073 ? metalc ? metalc5 A SG CYS 256 A CYS 507 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc6 A ND1 HIS 443 A HIS 726 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.082 ? metalc ? metalc7 A NE2 HIS 445 A HIS 728 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc8 A NE2 HIS 447 A HIS 730 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc9 B SG CYS 55 B CYS 306 1_555 I ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc10 B SG CYS 58 B CYS 309 1_555 I ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.546 ? metalc ? metalc11 B NE2 HIS 71 B HIS 322 1_555 I ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? metalc ? metalc12 B ND1 HIS 77 B HIS 328 1_555 I ZN ZN . B ZN 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc13 B SG CYS 256 B CYS 507 1_555 J ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc14 B ND1 HIS 443 B HIS 726 1_555 J ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? metalc ? metalc15 B NE2 HIS 445 B HIS 728 1_555 J ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? metalc ? metalc16 B NE2 HIS 447 B HIS 730 1_555 J ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.963 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6IW6 _atom_sites.fract_transf_matrix[1][1] 0.008828 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007823 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005924 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 1001 1001 ZN ZN . D 2 ZN A 1 1002 1002 ZN ZN . E 3 FLC A 1 1003 2001 FLC FLC . F 4 EDO A 1 1004 2 EDO EDO . G 4 EDO A 1 1005 6 EDO EDO . H 4 EDO A 1 1006 8 EDO EDO . I 2 ZN B 1 1001 1001 ZN ZN . J 2 ZN B 1 1002 1002 ZN ZN . K 3 FLC B 1 1003 2001 FLC FLC . L 4 EDO B 1 1004 1 EDO EDO . M 4 EDO B 1 1005 3 EDO EDO . N 4 EDO B 1 1006 4 EDO EDO . O 4 EDO B 1 1007 5 EDO EDO . P 4 EDO B 1 1008 7 EDO EDO . Q 5 HOH A 1 1101 42 HOH HOH . Q 5 HOH A 2 1102 30 HOH HOH . Q 5 HOH A 3 1103 49 HOH HOH . Q 5 HOH A 4 1104 4 HOH HOH . Q 5 HOH A 5 1105 13 HOH HOH . Q 5 HOH A 6 1106 46 HOH HOH . Q 5 HOH A 7 1107 89 HOH HOH . Q 5 HOH A 8 1108 8 HOH HOH . Q 5 HOH A 9 1109 52 HOH HOH . Q 5 HOH A 10 1110 56 HOH HOH . Q 5 HOH A 11 1111 50 HOH HOH . Q 5 HOH A 12 1112 67 HOH HOH . Q 5 HOH A 13 1113 18 HOH HOH . Q 5 HOH A 14 1114 1 HOH HOH . Q 5 HOH A 15 1115 21 HOH HOH . Q 5 HOH A 16 1116 34 HOH HOH . Q 5 HOH A 17 1117 71 HOH HOH . Q 5 HOH A 18 1118 12 HOH HOH . Q 5 HOH A 19 1119 37 HOH HOH . Q 5 HOH A 20 1120 44 HOH HOH . Q 5 HOH A 21 1121 54 HOH HOH . Q 5 HOH A 22 1122 31 HOH HOH . Q 5 HOH A 23 1123 53 HOH HOH . Q 5 HOH A 24 1124 79 HOH HOH . Q 5 HOH A 25 1125 15 HOH HOH . Q 5 HOH A 26 1126 73 HOH HOH . Q 5 HOH A 27 1127 91 HOH HOH . Q 5 HOH A 28 1128 27 HOH HOH . Q 5 HOH A 29 1129 74 HOH HOH . Q 5 HOH A 30 1130 98 HOH HOH . Q 5 HOH A 31 1131 41 HOH HOH . Q 5 HOH A 32 1132 81 HOH HOH . Q 5 HOH A 33 1133 90 HOH HOH . R 5 HOH B 1 1101 83 HOH HOH . R 5 HOH B 2 1102 86 HOH HOH . R 5 HOH B 3 1103 19 HOH HOH . R 5 HOH B 4 1104 6 HOH HOH . R 5 HOH B 5 1105 10 HOH HOH . R 5 HOH B 6 1106 24 HOH HOH . R 5 HOH B 7 1107 55 HOH HOH . R 5 HOH B 8 1108 32 HOH HOH . R 5 HOH B 9 1109 7 HOH HOH . R 5 HOH B 10 1110 29 HOH HOH . R 5 HOH B 11 1111 78 HOH HOH . R 5 HOH B 12 1112 84 HOH HOH . R 5 HOH B 13 1113 97 HOH HOH . R 5 HOH B 14 1114 3 HOH HOH . R 5 HOH B 15 1115 92 HOH HOH . R 5 HOH B 16 1116 5 HOH HOH . R 5 HOH B 17 1117 9 HOH HOH . R 5 HOH B 18 1118 45 HOH HOH . R 5 HOH B 19 1119 22 HOH HOH . R 5 HOH B 20 1120 14 HOH HOH . R 5 HOH B 21 1121 82 HOH HOH . R 5 HOH B 22 1122 28 HOH HOH . R 5 HOH B 23 1123 51 HOH HOH . R 5 HOH B 24 1124 40 HOH HOH . R 5 HOH B 25 1125 70 HOH HOH . R 5 HOH B 26 1126 35 HOH HOH . R 5 HOH B 27 1127 66 HOH HOH . R 5 HOH B 28 1128 95 HOH HOH . R 5 HOH B 29 1129 26 HOH HOH . R 5 HOH B 30 1130 2 HOH HOH . R 5 HOH B 31 1131 85 HOH HOH . R 5 HOH B 32 1132 11 HOH HOH . R 5 HOH B 33 1133 75 HOH HOH . R 5 HOH B 34 1134 87 HOH HOH . R 5 HOH B 35 1135 57 HOH HOH . R 5 HOH B 36 1136 36 HOH HOH . R 5 HOH B 37 1137 80 HOH HOH . R 5 HOH B 38 1138 16 HOH HOH . R 5 HOH B 39 1139 94 HOH HOH . R 5 HOH B 40 1140 59 HOH HOH . R 5 HOH B 41 1141 65 HOH HOH . R 5 HOH B 42 1142 68 HOH HOH . R 5 HOH B 43 1143 61 HOH HOH . R 5 HOH B 44 1144 102 HOH HOH . R 5 HOH B 45 1145 17 HOH HOH . R 5 HOH B 46 1146 96 HOH HOH . R 5 HOH B 47 1147 88 HOH HOH . R 5 HOH B 48 1148 77 HOH HOH . R 5 HOH B 49 1149 76 HOH HOH . R 5 HOH B 50 1150 101 HOH HOH . R 5 HOH B 51 1151 99 HOH HOH . R 5 HOH B 52 1152 62 HOH HOH . R 5 HOH B 53 1153 60 HOH HOH . R 5 HOH B 54 1154 100 HOH HOH . R 5 HOH B 55 1155 93 HOH HOH . R 5 HOH B 56 1156 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . O 4 -18.06 -12.917 4.058 1 74.06 ? C1 EDO 1007 B 1 HETATM 2 O O1 EDO . . . O 4 -16.68 -13.11 4.391 1 73.08 ? O1 EDO 1007 B 1 HETATM 3 C C2 EDO . . . O 4 -18.17 -12.582 2.576 1 72.46 ? C2 EDO 1007 B 1 HETATM 4 O O2 EDO . . . O 4 -17.289 -11.487 2.313 1 72.62 ? O2 EDO 1007 B 1 # _model_server_stats.io_time_ms 137 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 4 #