data_6IWM # _model_server_result.job_id S_Wh7u9ujtO1nJBRIjk1Ww _model_server_result.datetime_utc '2024-11-07 23:51:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iwm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":103}' # _entry.id 6IWM # _exptl.entry_id 6IWM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6IWM _cell.length_a 87.036 _cell.length_b 87.036 _cell.length_c 50.342 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IWM _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,I 1 1 B,E,F,G,H,J 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 x-y,x,z+1/6 0.5 -0.866025 0 0.866025 0.5 0 0 0 1 0 0 8.390333 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 51 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf2 A SG CYS 14 A CYS 14 1_555 A SG CYS 28 A CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf3 A SG CYS 29 A CYS 29 1_555 A SG CYS 74 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? disulf ? disulf4 A SG CYS 49 A CYS 49 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.098 ? disulf ? disulf5 B SG CYS 4 B CYS 4 1_555 B SG CYS 51 B CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 B SG CYS 14 B CYS 14 1_555 B SG CYS 28 B CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? disulf ? disulf7 B SG CYS 29 B CYS 29 1_555 B SG CYS 74 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf8 B SG CYS 49 B CYS 49 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 283 n n C C2 TRS sing 284 n n C C3 TRS sing 285 n n C N TRS sing 286 n n C1 O1 TRS sing 287 n n C1 H11 TRS sing 288 n n C1 H12 TRS sing 289 n n C2 O2 TRS sing 290 n n C2 H21 TRS sing 291 n n C2 H22 TRS sing 292 n n C3 O3 TRS sing 293 n n C3 H31 TRS sing 294 n n C3 H32 TRS sing 295 n n N HN1 TRS sing 296 n n N HN2 TRS sing 297 n n N HN3 TRS sing 298 n n O1 HO1 TRS sing 299 n n O2 HO2 TRS sing 300 n n O3 HO3 TRS sing 301 n n # _atom_sites.entry_id 6IWM _atom_sites.fract_transf_matrix[1][1] 0.011489 _atom_sites.fract_transf_matrix[1][2] 0.006633 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019864 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 101 1 GOL GOL . D 3 SO4 A 1 102 2 SO4 SO4 . E 2 GOL B 1 101 2 GOL GOL . F 2 GOL B 1 102 3 GOL GOL . G 4 TRS B 1 103 1 TRS TRS . H 3 SO4 B 1 104 1 SO4 SO4 . I 5 HOH A 1 201 9 HOH HOH . I 5 HOH A 2 202 2 HOH HOH . I 5 HOH A 3 203 188 HOH HOH . I 5 HOH A 4 204 56 HOH HOH . I 5 HOH A 5 205 36 HOH HOH . I 5 HOH A 6 206 174 HOH HOH . I 5 HOH A 7 207 206 HOH HOH . I 5 HOH A 8 208 52 HOH HOH . I 5 HOH A 9 209 123 HOH HOH . I 5 HOH A 10 210 25 HOH HOH . I 5 HOH A 11 211 70 HOH HOH . I 5 HOH A 12 212 86 HOH HOH . I 5 HOH A 13 213 71 HOH HOH . I 5 HOH A 14 214 61 HOH HOH . I 5 HOH A 15 215 24 HOH HOH . I 5 HOH A 16 216 17 HOH HOH . I 5 HOH A 17 217 46 HOH HOH . I 5 HOH A 18 218 7 HOH HOH . I 5 HOH A 19 219 27 HOH HOH . I 5 HOH A 20 220 10 HOH HOH . I 5 HOH A 21 221 82 HOH HOH . I 5 HOH A 22 222 176 HOH HOH . I 5 HOH A 23 223 18 HOH HOH . I 5 HOH A 24 224 13 HOH HOH . I 5 HOH A 25 225 165 HOH HOH . I 5 HOH A 26 226 1 HOH HOH . I 5 HOH A 27 227 14 HOH HOH . I 5 HOH A 28 228 67 HOH HOH . I 5 HOH A 29 229 173 HOH HOH . I 5 HOH A 30 230 5 HOH HOH . I 5 HOH A 31 231 26 HOH HOH . I 5 HOH A 32 232 161 HOH HOH . I 5 HOH A 33 233 22 HOH HOH . I 5 HOH A 34 234 194 HOH HOH . I 5 HOH A 35 235 172 HOH HOH . I 5 HOH A 36 236 178 HOH HOH . I 5 HOH A 37 237 162 HOH HOH . I 5 HOH A 38 238 28 HOH HOH . I 5 HOH A 39 239 164 HOH HOH . I 5 HOH A 40 240 48 HOH HOH . I 5 HOH A 41 241 205 HOH HOH . I 5 HOH A 42 242 208 HOH HOH . I 5 HOH A 43 243 68 HOH HOH . I 5 HOH A 44 244 215 HOH HOH . J 5 HOH B 1 201 177 HOH HOH . J 5 HOH B 2 202 134 HOH HOH . J 5 HOH B 3 203 12 HOH HOH . J 5 HOH B 4 204 171 HOH HOH . J 5 HOH B 5 205 119 HOH HOH . J 5 HOH B 6 206 45 HOH HOH . J 5 HOH B 7 207 43 HOH HOH . J 5 HOH B 8 208 102 HOH HOH . J 5 HOH B 9 209 182 HOH HOH . J 5 HOH B 10 210 180 HOH HOH . J 5 HOH B 11 211 38 HOH HOH . J 5 HOH B 12 212 169 HOH HOH . J 5 HOH B 13 213 29 HOH HOH . J 5 HOH B 14 214 23 HOH HOH . J 5 HOH B 15 215 16 HOH HOH . J 5 HOH B 16 216 15 HOH HOH . J 5 HOH B 17 217 20 HOH HOH . J 5 HOH B 18 218 11 HOH HOH . J 5 HOH B 19 219 42 HOH HOH . J 5 HOH B 20 220 34 HOH HOH . J 5 HOH B 21 221 8 HOH HOH . J 5 HOH B 22 222 35 HOH HOH . J 5 HOH B 23 223 124 HOH HOH . J 5 HOH B 24 224 216 HOH HOH . J 5 HOH B 25 225 207 HOH HOH . J 5 HOH B 26 226 37 HOH HOH . J 5 HOH B 27 227 6 HOH HOH . J 5 HOH B 28 228 175 HOH HOH . J 5 HOH B 29 229 114 HOH HOH . J 5 HOH B 30 230 94 HOH HOH . J 5 HOH B 31 231 66 HOH HOH . J 5 HOH B 32 232 217 HOH HOH . J 5 HOH B 33 233 54 HOH HOH . J 5 HOH B 34 234 47 HOH HOH . J 5 HOH B 35 235 84 HOH HOH . J 5 HOH B 36 236 209 HOH HOH . J 5 HOH B 37 237 78 HOH HOH . J 5 HOH B 38 238 212 HOH HOH . J 5 HOH B 39 239 213 HOH HOH . J 5 HOH B 40 240 214 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . G 4 -31.816 -27.872 22.549 1 62.99 ? C TRS 103 B 1 HETATM 2 C C1 TRS . . . G 4 -31.305 -26.435 22.677 1 66.6 ? C1 TRS 103 B 1 HETATM 3 C C2 TRS . . . G 4 -30.691 -28.866 22.27 1 61.55 ? C2 TRS 103 B 1 HETATM 4 C C3 TRS . . . G 4 -32.804 -27.974 21.406 1 57.5 ? C3 TRS 103 B 1 HETATM 5 N N TRS . . . G 4 -32.495 -28.253 23.771 1 69.37 ? N TRS 103 B 1 HETATM 6 O O1 TRS . . . G 4 -30.93 -26.183 24.012 1 66.09 ? O1 TRS 103 B 1 HETATM 7 O O2 TRS . . . G 4 -31.261 -30.114 21.939 1 42.67 ? O2 TRS 103 B 1 HETATM 8 O O3 TRS . . . G 4 -33.202 -29.308 21.297 1 52.29 ? O3 TRS 103 B 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #