data_6IWO # _model_server_result.job_id YnhHOKjy8nvNkbBE_mjIZw _model_server_result.datetime_utc '2025-02-05 07:54:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iwo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":102}' # _entry.id 6IWO # _exptl.entry_id 6IWO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 228.371 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MYRISTIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6IWO _cell.length_a 87.691 _cell.length_b 87.691 _cell.length_c 50.689 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IWO _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,E,F,G,I 1 1 A,C,D,H 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_654 -x+1,-y,z-1/2 -1 0 0 0 -1 0 0 0 1 87.691 0 -25.3445 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 51 A CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? disulf ? disulf2 A SG CYS 14 A CYS 14 1_555 A SG CYS 28 A CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf3 A SG CYS 29 A CYS 29 1_555 A SG CYS 74 A CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 A SG CYS 49 A CYS 49 1_555 A SG CYS 88 A CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? disulf ? disulf5 B SG CYS 4 B CYS 4 1_555 B SG CYS 51 B CYS 51 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf6 B SG CYS 14 B CYS 14 1_555 B SG CYS 28 B CYS 28 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf7 B SG CYS 29 B CYS 29 1_555 B SG CYS 74 B CYS 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 B SG CYS 49 B CYS 49 1_555 B SG CYS 88 B CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? # _chem_comp.formula 'C14 H28 O2' _chem_comp.formula_weight 228.371 _chem_comp.id MYR _chem_comp.mon_nstd_flag . _chem_comp.name 'MYRISTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 MYR doub 210 n n C1 O2 MYR sing 211 n n C1 C2 MYR sing 212 n n O2 HO2 MYR sing 213 n n C2 C3 MYR sing 214 n n C2 H21 MYR sing 215 n n C2 H22 MYR sing 216 n n C3 C4 MYR sing 217 n n C3 H31 MYR sing 218 n n C3 H32 MYR sing 219 n n C4 C5 MYR sing 220 n n C4 H41 MYR sing 221 n n C4 H42 MYR sing 222 n n C5 C6 MYR sing 223 n n C5 H51 MYR sing 224 n n C5 H52 MYR sing 225 n n C6 C7 MYR sing 226 n n C6 H61 MYR sing 227 n n C6 H62 MYR sing 228 n n C7 C8 MYR sing 229 n n C7 H71 MYR sing 230 n n C7 H72 MYR sing 231 n n C8 C9 MYR sing 232 n n C8 H81 MYR sing 233 n n C8 H82 MYR sing 234 n n C9 C10 MYR sing 235 n n C9 H91 MYR sing 236 n n C9 H92 MYR sing 237 n n C10 C11 MYR sing 238 n n C10 H101 MYR sing 239 n n C10 H102 MYR sing 240 n n C11 C12 MYR sing 241 n n C11 H111 MYR sing 242 n n C11 H112 MYR sing 243 n n C12 C13 MYR sing 244 n n C12 H121 MYR sing 245 n n C12 H122 MYR sing 246 n n C13 C14 MYR sing 247 n n C13 H131 MYR sing 248 n n C13 H132 MYR sing 249 n n C14 H141 MYR sing 250 n n C14 H142 MYR sing 251 n n C14 H143 MYR sing 252 n n # _atom_sites.entry_id 6IWO _atom_sites.fract_transf_matrix[1][1] 0.011404 _atom_sites.fract_transf_matrix[1][2] 0.006584 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019728 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 101 2 GOL GOL . D 3 MYR A 1 102 1 MYR MYR . E 4 SO4 B 1 101 1 SO4 SO4 . F 4 SO4 B 1 102 2 SO4 SO4 . G 2 GOL B 1 103 1 GOL GOL . H 5 HOH A 1 201 12 HOH HOH . H 5 HOH A 2 202 70 HOH HOH . H 5 HOH A 3 203 53 HOH HOH . H 5 HOH A 4 204 8 HOH HOH . H 5 HOH A 5 205 39 HOH HOH . H 5 HOH A 6 206 43 HOH HOH . H 5 HOH A 7 207 72 HOH HOH . H 5 HOH A 8 208 7 HOH HOH . H 5 HOH A 9 209 31 HOH HOH . H 5 HOH A 10 210 26 HOH HOH . H 5 HOH A 11 211 41 HOH HOH . H 5 HOH A 12 212 16 HOH HOH . H 5 HOH A 13 213 15 HOH HOH . H 5 HOH A 14 214 3 HOH HOH . H 5 HOH A 15 215 20 HOH HOH . H 5 HOH A 16 216 10 HOH HOH . H 5 HOH A 17 217 17 HOH HOH . H 5 HOH A 18 218 65 HOH HOH . H 5 HOH A 19 219 4 HOH HOH . H 5 HOH A 20 220 18 HOH HOH . H 5 HOH A 21 221 40 HOH HOH . H 5 HOH A 22 222 50 HOH HOH . H 5 HOH A 23 223 37 HOH HOH . H 5 HOH A 24 224 56 HOH HOH . H 5 HOH A 25 225 62 HOH HOH . H 5 HOH A 26 226 5 HOH HOH . H 5 HOH A 27 227 6 HOH HOH . H 5 HOH A 28 228 55 HOH HOH . H 5 HOH A 29 229 58 HOH HOH . H 5 HOH A 30 230 60 HOH HOH . I 5 HOH B 1 201 71 HOH HOH . I 5 HOH B 2 202 61 HOH HOH . I 5 HOH B 3 203 66 HOH HOH . I 5 HOH B 4 204 48 HOH HOH . I 5 HOH B 5 205 45 HOH HOH . I 5 HOH B 6 206 11 HOH HOH . I 5 HOH B 7 207 21 HOH HOH . I 5 HOH B 8 208 30 HOH HOH . I 5 HOH B 9 209 9 HOH HOH . I 5 HOH B 10 210 34 HOH HOH . I 5 HOH B 11 211 32 HOH HOH . I 5 HOH B 12 212 22 HOH HOH . I 5 HOH B 13 213 42 HOH HOH . I 5 HOH B 14 214 69 HOH HOH . I 5 HOH B 15 215 25 HOH HOH . I 5 HOH B 16 216 38 HOH HOH . I 5 HOH B 17 217 67 HOH HOH . I 5 HOH B 18 218 36 HOH HOH . I 5 HOH B 19 219 23 HOH HOH . I 5 HOH B 20 220 2 HOH HOH . I 5 HOH B 21 221 14 HOH HOH . I 5 HOH B 22 222 49 HOH HOH . I 5 HOH B 23 223 35 HOH HOH . I 5 HOH B 24 224 73 HOH HOH . I 5 HOH B 25 225 19 HOH HOH . I 5 HOH B 26 226 68 HOH HOH . I 5 HOH B 27 227 63 HOH HOH . I 5 HOH B 28 228 59 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MYR . . . D 3 49.923 -2.683 -9.57 1 56.23 ? C1 MYR 102 A 1 HETATM 2 O O1 MYR . . . D 3 50.694 -3.338 -10.311 1 58.47 ? O1 MYR 102 A 1 HETATM 3 O O2 MYR . . . D 3 50.353 -1.699 -8.917 1 60.89 ? O2 MYR 102 A 1 HETATM 4 C C2 MYR . . . D 3 48.461 -3.093 -9.472 1 52.86 ? C2 MYR 102 A 1 HETATM 5 C C3 MYR . . . D 3 47.791 -2.43 -8.28 1 49.56 ? C3 MYR 102 A 1 HETATM 6 C C4 MYR . . . D 3 46.461 -1.886 -8.778 1 47.39 ? C4 MYR 102 A 1 HETATM 7 C C5 MYR . . . D 3 46.556 -0.385 -9.045 1 47.39 ? C5 MYR 102 A 1 HETATM 8 C C6 MYR . . . D 3 47.614 0.303 -8.183 1 49.81 ? C6 MYR 102 A 1 HETATM 9 C C7 MYR . . . D 3 48.106 1.609 -8.82 1 54.83 ? C7 MYR 102 A 1 HETATM 10 C C8 MYR . . . D 3 47.251 2.035 -10.016 1 51.58 ? C8 MYR 102 A 1 HETATM 11 C C9 MYR . . . D 3 46.381 3.23 -9.656 1 51.3 ? C9 MYR 102 A 1 HETATM 12 C C10 MYR . . . D 3 44.988 2.727 -9.308 1 51.04 ? C10 MYR 102 A 1 HETATM 13 C C11 MYR . . . D 3 44.89 2.581 -7.795 1 51.47 ? C11 MYR 102 A 1 HETATM 14 C C12 MYR . . . D 3 43.736 3.46 -7.366 1 51.54 ? C12 MYR 102 A 1 HETATM 15 C C13 MYR . . . D 3 43.946 4.04 -5.986 1 51.82 ? C13 MYR 102 A 1 HETATM 16 C C14 MYR . . . D 3 42.604 4.518 -5.45 1 50.72 ? C14 MYR 102 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 16 #