data_6IWQ # _model_server_result.job_id XNa45JV1WAC3ZCB3X0h3fw _model_server_result.datetime_utc '2024-10-19 16:45:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iwq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":701}' # _entry.id 6IWQ # _exptl.entry_id 6IWQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6IWQ _cell.length_a 137.695 _cell.length_b 158.233 _cell.length_c 251.87 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IWQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 PISA dimeric 2 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G,I,M,O 1 1 B,D,H,J,N,P 2 1 E,K,Q 3 1 F,L,R 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_654 -x+1,y+1/2,-z-1/2 -1 0 0 0 1 0 0 0 -1 137.695 79.1165 -125.935 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 485 A CYS 545 1_555 A SG CYS 502 A CYS 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf2 A SG CYS 525 A CYS 585 1_555 A SG CYS 540 A CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.978 ? disulf ? disulf3 A SG CYS 565 A CYS 625 1_555 A SG CYS 580 A CYS 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf4 B SG CYS 137 B CYS 197 1_555 B SG CYS 375 B CYS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf5 B SG CYS 366 B CYS 426 1_555 B SG CYS 447 B CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf6 B SG CYS 485 B CYS 545 1_555 B SG CYS 502 B CYS 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 B SG CYS 525 B CYS 585 1_555 B SG CYS 540 B CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? disulf ? disulf8 B SG CYS 565 B CYS 625 1_555 B SG CYS 580 B CYS 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.664 ? disulf ? disulf9 C SG CYS 137 C CYS 197 1_555 C SG CYS 375 C CYS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? disulf ? disulf10 C SG CYS 366 C CYS 426 1_555 C SG CYS 447 C CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf11 C SG CYS 485 C CYS 545 1_555 C SG CYS 502 C CYS 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.046 ? disulf ? disulf12 C SG CYS 525 C CYS 585 1_555 C SG CYS 540 C CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? disulf ? disulf13 C SG CYS 565 C CYS 625 1_555 C SG CYS 580 C CYS 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.857 ? disulf ? disulf14 D SG CYS 137 D CYS 197 1_555 D SG CYS 375 D CYS 435 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf15 D SG CYS 366 D CYS 426 1_555 D SG CYS 447 D CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf16 D SG CYS 525 D CYS 585 1_555 D SG CYS 540 D CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? disulf ? disulf17 E SG CYS 485 E CYS 545 1_555 E SG CYS 502 E CYS 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? disulf ? disulf18 E SG CYS 525 E CYS 585 1_555 E SG CYS 540 E CYS 600 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf19 E SG CYS 565 E CYS 625 1_555 E SG CYS 580 E CYS 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? disulf ? disulf20 F SG CYS 366 F CYS 426 1_555 F SG CYS 447 F CYS 507 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? disulf ? disulf21 F SG CYS 565 F CYS 625 1_555 F SG CYS 580 F CYS 640 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? metalc ? metalc1 B OD2 ASP 241 B ASP 301 1_555 H MN MN . B MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.37 ? metalc ? metalc2 C OD2 ASP 241 C ASP 301 1_555 I MN MN . C MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.756 ? metalc ? metalc3 E OD2 ASP 241 E ASP 301 1_555 K MN MN . E MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc4 E NE2 HIS 243 E HIS 303 1_555 K MN MN . E MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.73 ? metalc ? metalc5 E NE2 HIS 380 E HIS 440 1_555 K MN MN . E MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc6 F OD2 ASP 241 F ASP 301 1_555 L MN MN . F MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.406 ? metalc ? metalc7 F NE2 HIS 243 F HIS 303 1_555 L MN MN . F MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.687 ? metalc ? metalc8 F NE2 HIS 380 F HIS 440 1_555 L MN MN . F MN 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.572 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6IWQ _atom_sites.fract_transf_matrix[1][1] 0.007262 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00632 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 MN A 1 701 1 MN MN . H 2 MN B 1 701 2 MN MN . I 2 MN C 1 701 3 MN MN . J 2 MN D 1 701 4 MN MN . K 2 MN E 1 701 5 MN MN . L 2 MN F 1 701 6 MN MN . M 3 HOH A 1 801 134 HOH HOH . M 3 HOH A 2 802 137 HOH HOH . M 3 HOH A 3 803 68 HOH HOH . M 3 HOH A 4 804 36 HOH HOH . M 3 HOH A 5 805 112 HOH HOH . M 3 HOH A 6 806 120 HOH HOH . M 3 HOH A 7 807 77 HOH HOH . M 3 HOH A 8 808 91 HOH HOH . M 3 HOH A 9 809 139 HOH HOH . M 3 HOH A 10 810 152 HOH HOH . M 3 HOH A 11 811 34 HOH HOH . M 3 HOH A 12 812 161 HOH HOH . M 3 HOH A 13 813 65 HOH HOH . M 3 HOH A 14 814 55 HOH HOH . M 3 HOH A 15 815 23 HOH HOH . M 3 HOH A 16 816 180 HOH HOH . M 3 HOH A 17 817 192 HOH HOH . M 3 HOH A 18 818 63 HOH HOH . M 3 HOH A 19 819 113 HOH HOH . M 3 HOH A 20 820 154 HOH HOH . M 3 HOH A 21 821 86 HOH HOH . M 3 HOH A 22 822 135 HOH HOH . M 3 HOH A 23 823 66 HOH HOH . M 3 HOH A 24 824 136 HOH HOH . M 3 HOH A 25 825 195 HOH HOH . M 3 HOH A 26 826 25 HOH HOH . M 3 HOH A 27 827 122 HOH HOH . M 3 HOH A 28 828 164 HOH HOH . M 3 HOH A 29 829 157 HOH HOH . M 3 HOH A 30 830 16 HOH HOH . M 3 HOH A 31 831 98 HOH HOH . M 3 HOH A 32 832 61 HOH HOH . M 3 HOH A 33 833 35 HOH HOH . M 3 HOH A 34 834 100 HOH HOH . M 3 HOH A 35 835 60 HOH HOH . M 3 HOH A 36 836 4 HOH HOH . M 3 HOH A 37 837 85 HOH HOH . M 3 HOH A 38 838 103 HOH HOH . M 3 HOH A 39 839 39 HOH HOH . M 3 HOH A 40 840 46 HOH HOH . M 3 HOH A 41 841 153 HOH HOH . M 3 HOH A 42 842 128 HOH HOH . N 3 HOH B 1 801 101 HOH HOH . N 3 HOH B 2 802 27 HOH HOH . N 3 HOH B 3 803 173 HOH HOH . N 3 HOH B 4 804 78 HOH HOH . N 3 HOH B 5 805 169 HOH HOH . N 3 HOH B 6 806 41 HOH HOH . N 3 HOH B 7 807 72 HOH HOH . N 3 HOH B 8 808 69 HOH HOH . N 3 HOH B 9 809 48 HOH HOH . N 3 HOH B 10 810 181 HOH HOH . N 3 HOH B 11 811 97 HOH HOH . N 3 HOH B 12 812 111 HOH HOH . N 3 HOH B 13 813 28 HOH HOH . N 3 HOH B 14 814 5 HOH HOH . N 3 HOH B 15 815 197 HOH HOH . N 3 HOH B 16 816 96 HOH HOH . N 3 HOH B 17 817 84 HOH HOH . N 3 HOH B 18 818 40 HOH HOH . N 3 HOH B 19 819 88 HOH HOH . N 3 HOH B 20 820 37 HOH HOH . N 3 HOH B 21 821 143 HOH HOH . N 3 HOH B 22 822 141 HOH HOH . N 3 HOH B 23 823 187 HOH HOH . N 3 HOH B 24 824 14 HOH HOH . N 3 HOH B 25 825 31 HOH HOH . N 3 HOH B 26 826 125 HOH HOH . N 3 HOH B 27 827 129 HOH HOH . N 3 HOH B 28 828 12 HOH HOH . N 3 HOH B 29 829 50 HOH HOH . N 3 HOH B 30 830 49 HOH HOH . N 3 HOH B 31 831 80 HOH HOH . O 3 HOH C 1 801 2 HOH HOH . O 3 HOH C 2 802 67 HOH HOH . O 3 HOH C 3 803 182 HOH HOH . O 3 HOH C 4 804 148 HOH HOH . O 3 HOH C 5 805 45 HOH HOH . O 3 HOH C 6 806 109 HOH HOH . O 3 HOH C 7 807 92 HOH HOH . O 3 HOH C 8 808 8 HOH HOH . O 3 HOH C 9 809 57 HOH HOH . O 3 HOH C 10 810 138 HOH HOH . O 3 HOH C 11 811 53 HOH HOH . O 3 HOH C 12 812 89 HOH HOH . O 3 HOH C 13 813 20 HOH HOH . O 3 HOH C 14 814 166 HOH HOH . O 3 HOH C 15 815 145 HOH HOH . O 3 HOH C 16 816 142 HOH HOH . O 3 HOH C 17 817 176 HOH HOH . O 3 HOH C 18 818 163 HOH HOH . O 3 HOH C 19 819 79 HOH HOH . O 3 HOH C 20 820 10 HOH HOH . O 3 HOH C 21 821 127 HOH HOH . O 3 HOH C 22 822 42 HOH HOH . O 3 HOH C 23 823 54 HOH HOH . O 3 HOH C 24 824 190 HOH HOH . O 3 HOH C 25 825 130 HOH HOH . O 3 HOH C 26 826 29 HOH HOH . O 3 HOH C 27 827 165 HOH HOH . O 3 HOH C 28 828 174 HOH HOH . O 3 HOH C 29 829 70 HOH HOH . O 3 HOH C 30 830 95 HOH HOH . O 3 HOH C 31 831 201 HOH HOH . O 3 HOH C 32 832 30 HOH HOH . O 3 HOH C 33 833 104 HOH HOH . O 3 HOH C 34 834 115 HOH HOH . O 3 HOH C 35 835 58 HOH HOH . O 3 HOH C 36 836 133 HOH HOH . O 3 HOH C 37 837 191 HOH HOH . O 3 HOH C 38 838 185 HOH HOH . O 3 HOH C 39 839 108 HOH HOH . O 3 HOH C 40 840 32 HOH HOH . O 3 HOH C 41 841 83 HOH HOH . O 3 HOH C 42 842 202 HOH HOH . P 3 HOH D 1 801 150 HOH HOH . P 3 HOH D 2 802 114 HOH HOH . P 3 HOH D 3 803 13 HOH HOH . P 3 HOH D 4 804 179 HOH HOH . P 3 HOH D 5 805 199 HOH HOH . P 3 HOH D 6 806 189 HOH HOH . P 3 HOH D 7 807 144 HOH HOH . P 3 HOH D 8 808 193 HOH HOH . P 3 HOH D 9 809 123 HOH HOH . P 3 HOH D 10 810 126 HOH HOH . P 3 HOH D 11 811 124 HOH HOH . P 3 HOH D 12 812 75 HOH HOH . P 3 HOH D 13 813 52 HOH HOH . P 3 HOH D 14 814 24 HOH HOH . P 3 HOH D 15 815 90 HOH HOH . P 3 HOH D 16 816 64 HOH HOH . P 3 HOH D 17 817 82 HOH HOH . P 3 HOH D 18 818 167 HOH HOH . P 3 HOH D 19 819 170 HOH HOH . P 3 HOH D 20 820 93 HOH HOH . P 3 HOH D 21 821 117 HOH HOH . P 3 HOH D 22 822 184 HOH HOH . P 3 HOH D 23 823 172 HOH HOH . P 3 HOH D 24 824 17 HOH HOH . P 3 HOH D 25 825 160 HOH HOH . Q 3 HOH E 1 801 175 HOH HOH . Q 3 HOH E 2 802 106 HOH HOH . Q 3 HOH E 3 803 47 HOH HOH . Q 3 HOH E 4 804 162 HOH HOH . Q 3 HOH E 5 805 107 HOH HOH . Q 3 HOH E 6 806 7 HOH HOH . Q 3 HOH E 7 807 74 HOH HOH . Q 3 HOH E 8 808 26 HOH HOH . Q 3 HOH E 9 809 183 HOH HOH . Q 3 HOH E 10 810 102 HOH HOH . Q 3 HOH E 11 811 198 HOH HOH . Q 3 HOH E 12 812 22 HOH HOH . Q 3 HOH E 13 813 3 HOH HOH . Q 3 HOH E 14 814 118 HOH HOH . Q 3 HOH E 15 815 71 HOH HOH . Q 3 HOH E 16 816 6 HOH HOH . Q 3 HOH E 17 817 62 HOH HOH . Q 3 HOH E 18 818 177 HOH HOH . Q 3 HOH E 19 819 87 HOH HOH . Q 3 HOH E 20 820 151 HOH HOH . Q 3 HOH E 21 821 178 HOH HOH . Q 3 HOH E 22 822 121 HOH HOH . Q 3 HOH E 23 823 9 HOH HOH . Q 3 HOH E 24 824 110 HOH HOH . Q 3 HOH E 25 825 73 HOH HOH . Q 3 HOH E 26 826 38 HOH HOH . Q 3 HOH E 27 827 76 HOH HOH . Q 3 HOH E 28 828 204 HOH HOH . Q 3 HOH E 29 829 203 HOH HOH . Q 3 HOH E 30 830 119 HOH HOH . R 3 HOH F 1 801 159 HOH HOH . R 3 HOH F 2 802 59 HOH HOH . R 3 HOH F 3 803 44 HOH HOH . R 3 HOH F 4 804 56 HOH HOH . R 3 HOH F 5 805 21 HOH HOH . R 3 HOH F 6 806 200 HOH HOH . R 3 HOH F 7 807 168 HOH HOH . R 3 HOH F 8 808 171 HOH HOH . R 3 HOH F 9 809 147 HOH HOH . R 3 HOH F 10 810 43 HOH HOH . R 3 HOH F 11 811 18 HOH HOH . R 3 HOH F 12 812 146 HOH HOH . R 3 HOH F 13 813 51 HOH HOH . R 3 HOH F 14 814 94 HOH HOH . R 3 HOH F 15 815 186 HOH HOH . R 3 HOH F 16 816 132 HOH HOH . R 3 HOH F 17 817 105 HOH HOH . R 3 HOH F 18 818 158 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id J _atom_site.label_entity_id 2 _atom_site.Cartn_x 78.324 _atom_site.Cartn_y 161.037 _atom_site.Cartn_z 25.912 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 74.98 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 701 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 39 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #