data_6IYM # _model_server_result.job_id WqmPqZvCYOt-JXBxjqGQZg _model_server_result.datetime_utc '2025-07-03 08:44:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6iym # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6IYM # _exptl.entry_id 6IYM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.68 _cell.angle_gamma 90 _cell.entry_id 6IYM _cell.length_a 120.437 _cell.length_b 72.656 _cell.length_c 63.374 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IYM _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 124 A GLU 124 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? metalc ? metalc2 A OE2 GLU 126 A GLU 126 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? metalc ? metalc3 A OD2 ASP 155 A ASP 155 1_555 C MG MG . A MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.095 ? metalc ? metalc4 B OE2 GLU 124 B GLU 124 1_555 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc5 B OE2 GLU 126 B GLU 126 1_555 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc6 B OD2 ASP 155 B ASP 155 1_555 D MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6IYM _atom_sites.fract_transf_matrix[1][1] 0.008303 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001717 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013763 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016113 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MG A 1 301 2 MG MG . D 2 MG B 1 301 1 MG MG . E 3 HOH A 1 401 118 HOH HOH . E 3 HOH A 2 402 96 HOH HOH . E 3 HOH A 3 403 37 HOH HOH . E 3 HOH A 4 404 52 HOH HOH . E 3 HOH A 5 405 116 HOH HOH . E 3 HOH A 6 406 11 HOH HOH . E 3 HOH A 7 407 28 HOH HOH . E 3 HOH A 8 408 60 HOH HOH . E 3 HOH A 9 409 88 HOH HOH . E 3 HOH A 10 410 2 HOH HOH . E 3 HOH A 11 411 1 HOH HOH . E 3 HOH A 12 412 20 HOH HOH . E 3 HOH A 13 413 77 HOH HOH . E 3 HOH A 14 414 110 HOH HOH . E 3 HOH A 15 415 55 HOH HOH . E 3 HOH A 16 416 66 HOH HOH . E 3 HOH A 17 417 48 HOH HOH . E 3 HOH A 18 418 112 HOH HOH . E 3 HOH A 19 419 42 HOH HOH . E 3 HOH A 20 420 74 HOH HOH . E 3 HOH A 21 421 56 HOH HOH . E 3 HOH A 22 422 25 HOH HOH . E 3 HOH A 23 423 53 HOH HOH . E 3 HOH A 24 424 94 HOH HOH . E 3 HOH A 25 425 14 HOH HOH . E 3 HOH A 26 426 38 HOH HOH . E 3 HOH A 27 427 39 HOH HOH . E 3 HOH A 28 428 10 HOH HOH . E 3 HOH A 29 429 105 HOH HOH . E 3 HOH A 30 430 12 HOH HOH . E 3 HOH A 31 431 78 HOH HOH . E 3 HOH A 32 432 62 HOH HOH . E 3 HOH A 33 433 45 HOH HOH . E 3 HOH A 34 434 3 HOH HOH . E 3 HOH A 35 435 23 HOH HOH . E 3 HOH A 36 436 30 HOH HOH . E 3 HOH A 37 437 115 HOH HOH . E 3 HOH A 38 438 49 HOH HOH . E 3 HOH A 39 439 67 HOH HOH . E 3 HOH A 40 440 50 HOH HOH . E 3 HOH A 41 441 26 HOH HOH . E 3 HOH A 42 442 57 HOH HOH . E 3 HOH A 43 443 99 HOH HOH . E 3 HOH A 44 444 6 HOH HOH . E 3 HOH A 45 445 97 HOH HOH . E 3 HOH A 46 446 80 HOH HOH . E 3 HOH A 47 447 22 HOH HOH . E 3 HOH A 48 448 8 HOH HOH . E 3 HOH A 49 449 31 HOH HOH . E 3 HOH A 50 450 63 HOH HOH . E 3 HOH A 51 451 9 HOH HOH . E 3 HOH A 52 452 15 HOH HOH . E 3 HOH A 53 453 120 HOH HOH . E 3 HOH A 54 454 40 HOH HOH . E 3 HOH A 55 455 58 HOH HOH . E 3 HOH A 56 456 29 HOH HOH . E 3 HOH A 57 457 107 HOH HOH . E 3 HOH A 58 458 84 HOH HOH . E 3 HOH A 59 459 79 HOH HOH . E 3 HOH A 60 460 89 HOH HOH . E 3 HOH A 61 461 92 HOH HOH . E 3 HOH A 62 462 102 HOH HOH . E 3 HOH A 63 463 65 HOH HOH . E 3 HOH A 64 464 61 HOH HOH . E 3 HOH A 65 465 16 HOH HOH . E 3 HOH A 66 466 54 HOH HOH . E 3 HOH A 67 467 109 HOH HOH . E 3 HOH A 68 468 98 HOH HOH . E 3 HOH A 69 469 101 HOH HOH . E 3 HOH A 70 470 51 HOH HOH . E 3 HOH A 71 471 64 HOH HOH . F 3 HOH B 1 401 108 HOH HOH . F 3 HOH B 2 402 113 HOH HOH . F 3 HOH B 3 403 41 HOH HOH . F 3 HOH B 4 404 32 HOH HOH . F 3 HOH B 5 405 75 HOH HOH . F 3 HOH B 6 406 4 HOH HOH . F 3 HOH B 7 407 34 HOH HOH . F 3 HOH B 8 408 47 HOH HOH . F 3 HOH B 9 409 18 HOH HOH . F 3 HOH B 10 410 17 HOH HOH . F 3 HOH B 11 411 100 HOH HOH . F 3 HOH B 12 412 27 HOH HOH . F 3 HOH B 13 413 86 HOH HOH . F 3 HOH B 14 414 70 HOH HOH . F 3 HOH B 15 415 46 HOH HOH . F 3 HOH B 16 416 68 HOH HOH . F 3 HOH B 17 417 85 HOH HOH . F 3 HOH B 18 418 71 HOH HOH . F 3 HOH B 19 419 44 HOH HOH . F 3 HOH B 20 420 19 HOH HOH . F 3 HOH B 21 421 21 HOH HOH . F 3 HOH B 22 422 36 HOH HOH . F 3 HOH B 23 423 114 HOH HOH . F 3 HOH B 24 424 13 HOH HOH . F 3 HOH B 25 425 5 HOH HOH . F 3 HOH B 26 426 83 HOH HOH . F 3 HOH B 27 427 69 HOH HOH . F 3 HOH B 28 428 82 HOH HOH . F 3 HOH B 29 429 90 HOH HOH . F 3 HOH B 30 430 104 HOH HOH . F 3 HOH B 31 431 43 HOH HOH . F 3 HOH B 32 432 35 HOH HOH . F 3 HOH B 33 433 81 HOH HOH . F 3 HOH B 34 434 111 HOH HOH . F 3 HOH B 35 435 72 HOH HOH . F 3 HOH B 36 436 73 HOH HOH . F 3 HOH B 37 437 117 HOH HOH . F 3 HOH B 38 438 33 HOH HOH . F 3 HOH B 39 439 91 HOH HOH . F 3 HOH B 40 440 59 HOH HOH . F 3 HOH B 41 441 24 HOH HOH . F 3 HOH B 42 442 87 HOH HOH . F 3 HOH B 43 443 95 HOH HOH . F 3 HOH B 44 444 93 HOH HOH . F 3 HOH B 45 445 119 HOH HOH . F 3 HOH B 46 446 76 HOH HOH . F 3 HOH B 47 447 103 HOH HOH . F 3 HOH B 48 448 106 HOH HOH . F 3 HOH B 49 449 7 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 36.205 _atom_site.Cartn_y 14.216 _atom_site.Cartn_z 17.494 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 47.35 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #