data_6IZO # _model_server_result.job_id rKTB9bnRM3DI9yS9QoSgrQ _model_server_result.datetime_utc '2024-11-26 12:30:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6izo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6IZO # _exptl.entry_id 6IZO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.45 _cell.angle_gamma 90 _cell.entry_id 6IZO _cell.length_a 84.108 _cell.length_b 59.494 _cell.length_c 87.245 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6IZO _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6IZO _atom_sites.fract_transf_matrix[1][1] 0.011889 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000508 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016808 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011472 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 401 1 EDO EDO . D 3 PEG A 1 402 1 PEG PEG . E 2 EDO B 1 401 2 EDO EDO . F 2 EDO B 1 402 3 EDO EDO . G 4 HOH A 1 501 137 HOH HOH . G 4 HOH A 2 502 69 HOH HOH . G 4 HOH A 3 503 37 HOH HOH . G 4 HOH A 4 504 60 HOH HOH . G 4 HOH A 5 505 112 HOH HOH . G 4 HOH A 6 506 125 HOH HOH . G 4 HOH A 7 507 24 HOH HOH . G 4 HOH A 8 508 57 HOH HOH . G 4 HOH A 9 509 40 HOH HOH . G 4 HOH A 10 510 20 HOH HOH . G 4 HOH A 11 511 81 HOH HOH . G 4 HOH A 12 512 80 HOH HOH . G 4 HOH A 13 513 38 HOH HOH . G 4 HOH A 14 514 108 HOH HOH . G 4 HOH A 15 515 115 HOH HOH . G 4 HOH A 16 516 147 HOH HOH . G 4 HOH A 17 517 58 HOH HOH . G 4 HOH A 18 518 6 HOH HOH . G 4 HOH A 19 519 44 HOH HOH . G 4 HOH A 20 520 72 HOH HOH . G 4 HOH A 21 521 75 HOH HOH . G 4 HOH A 22 522 7 HOH HOH . G 4 HOH A 23 523 39 HOH HOH . G 4 HOH A 24 524 66 HOH HOH . G 4 HOH A 25 525 61 HOH HOH . G 4 HOH A 26 526 32 HOH HOH . G 4 HOH A 27 527 109 HOH HOH . G 4 HOH A 28 528 56 HOH HOH . G 4 HOH A 29 529 79 HOH HOH . G 4 HOH A 30 530 129 HOH HOH . G 4 HOH A 31 531 114 HOH HOH . G 4 HOH A 32 532 10 HOH HOH . G 4 HOH A 33 533 15 HOH HOH . G 4 HOH A 34 534 4 HOH HOH . G 4 HOH A 35 535 59 HOH HOH . G 4 HOH A 36 536 73 HOH HOH . G 4 HOH A 37 537 9 HOH HOH . G 4 HOH A 38 538 21 HOH HOH . G 4 HOH A 39 539 88 HOH HOH . G 4 HOH A 40 540 48 HOH HOH . G 4 HOH A 41 541 18 HOH HOH . G 4 HOH A 42 542 19 HOH HOH . G 4 HOH A 43 543 143 HOH HOH . G 4 HOH A 44 544 144 HOH HOH . G 4 HOH A 45 545 95 HOH HOH . G 4 HOH A 46 546 96 HOH HOH . G 4 HOH A 47 547 118 HOH HOH . G 4 HOH A 48 548 76 HOH HOH . G 4 HOH A 49 549 25 HOH HOH . G 4 HOH A 50 550 103 HOH HOH . G 4 HOH A 51 551 92 HOH HOH . G 4 HOH A 52 552 23 HOH HOH . G 4 HOH A 53 553 93 HOH HOH . G 4 HOH A 54 554 52 HOH HOH . G 4 HOH A 55 555 97 HOH HOH . G 4 HOH A 56 556 78 HOH HOH . G 4 HOH A 57 557 50 HOH HOH . G 4 HOH A 58 558 152 HOH HOH . G 4 HOH A 59 559 30 HOH HOH . G 4 HOH A 60 560 14 HOH HOH . G 4 HOH A 61 561 74 HOH HOH . G 4 HOH A 62 562 29 HOH HOH . G 4 HOH A 63 563 151 HOH HOH . G 4 HOH A 64 564 34 HOH HOH . G 4 HOH A 65 565 22 HOH HOH . G 4 HOH A 66 566 136 HOH HOH . G 4 HOH A 67 567 47 HOH HOH . G 4 HOH A 68 568 64 HOH HOH . G 4 HOH A 69 569 82 HOH HOH . G 4 HOH A 70 570 12 HOH HOH . G 4 HOH A 71 571 156 HOH HOH . G 4 HOH A 72 572 70 HOH HOH . G 4 HOH A 73 573 117 HOH HOH . G 4 HOH A 74 574 67 HOH HOH . G 4 HOH A 75 575 98 HOH HOH . G 4 HOH A 76 576 100 HOH HOH . H 4 HOH B 1 501 51 HOH HOH . H 4 HOH B 2 502 107 HOH HOH . H 4 HOH B 3 503 41 HOH HOH . H 4 HOH B 4 504 17 HOH HOH . H 4 HOH B 5 505 119 HOH HOH . H 4 HOH B 6 506 13 HOH HOH . H 4 HOH B 7 507 54 HOH HOH . H 4 HOH B 8 508 86 HOH HOH . H 4 HOH B 9 509 90 HOH HOH . H 4 HOH B 10 510 139 HOH HOH . H 4 HOH B 11 511 26 HOH HOH . H 4 HOH B 12 512 128 HOH HOH . H 4 HOH B 13 513 36 HOH HOH . H 4 HOH B 14 514 106 HOH HOH . H 4 HOH B 15 515 35 HOH HOH . H 4 HOH B 16 516 135 HOH HOH . H 4 HOH B 17 517 116 HOH HOH . H 4 HOH B 18 518 150 HOH HOH . H 4 HOH B 19 519 105 HOH HOH . H 4 HOH B 20 520 146 HOH HOH . H 4 HOH B 21 521 138 HOH HOH . H 4 HOH B 22 522 99 HOH HOH . H 4 HOH B 23 523 1 HOH HOH . H 4 HOH B 24 524 68 HOH HOH . H 4 HOH B 25 525 55 HOH HOH . H 4 HOH B 26 526 101 HOH HOH . H 4 HOH B 27 527 33 HOH HOH . H 4 HOH B 28 528 145 HOH HOH . H 4 HOH B 29 529 123 HOH HOH . H 4 HOH B 30 530 16 HOH HOH . H 4 HOH B 31 531 83 HOH HOH . H 4 HOH B 32 532 71 HOH HOH . H 4 HOH B 33 533 113 HOH HOH . H 4 HOH B 34 534 87 HOH HOH . H 4 HOH B 35 535 2 HOH HOH . H 4 HOH B 36 536 5 HOH HOH . H 4 HOH B 37 537 141 HOH HOH . H 4 HOH B 38 538 53 HOH HOH . H 4 HOH B 39 539 94 HOH HOH . H 4 HOH B 40 540 133 HOH HOH . H 4 HOH B 41 541 43 HOH HOH . H 4 HOH B 42 542 31 HOH HOH . H 4 HOH B 43 543 134 HOH HOH . H 4 HOH B 44 544 46 HOH HOH . H 4 HOH B 45 545 149 HOH HOH . H 4 HOH B 46 546 102 HOH HOH . H 4 HOH B 47 547 3 HOH HOH . H 4 HOH B 48 548 127 HOH HOH . H 4 HOH B 49 549 142 HOH HOH . H 4 HOH B 50 550 42 HOH HOH . H 4 HOH B 51 551 77 HOH HOH . H 4 HOH B 52 552 110 HOH HOH . H 4 HOH B 53 553 49 HOH HOH . H 4 HOH B 54 554 28 HOH HOH . H 4 HOH B 55 555 104 HOH HOH . H 4 HOH B 56 556 131 HOH HOH . H 4 HOH B 57 557 65 HOH HOH . H 4 HOH B 58 558 11 HOH HOH . H 4 HOH B 59 559 8 HOH HOH . H 4 HOH B 60 560 130 HOH HOH . H 4 HOH B 61 561 132 HOH HOH . H 4 HOH B 62 562 45 HOH HOH . H 4 HOH B 63 563 122 HOH HOH . H 4 HOH B 64 564 85 HOH HOH . H 4 HOH B 65 565 27 HOH HOH . H 4 HOH B 66 566 91 HOH HOH . H 4 HOH B 67 567 111 HOH HOH . H 4 HOH B 68 568 121 HOH HOH . H 4 HOH B 69 569 120 HOH HOH . H 4 HOH B 70 570 62 HOH HOH . H 4 HOH B 71 571 124 HOH HOH . H 4 HOH B 72 572 89 HOH HOH . H 4 HOH B 73 573 148 HOH HOH . H 4 HOH B 74 574 63 HOH HOH . H 4 HOH B 75 575 126 HOH HOH . H 4 HOH B 76 576 154 HOH HOH . H 4 HOH B 77 577 84 HOH HOH . H 4 HOH B 78 578 140 HOH HOH . H 4 HOH B 79 579 153 HOH HOH . H 4 HOH B 80 580 155 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . C 2 -16.374 13.933 46.551 1 57.52 ? C1 EDO 401 A 1 HETATM 2 O O1 EDO . . . C 2 -16.075 12.613 46.057 1 60.54 ? O1 EDO 401 A 1 HETATM 3 C C2 EDO . . . C 2 -15.546 14.25 47.795 1 54.38 ? C2 EDO 401 A 1 HETATM 4 O O2 EDO . . . C 2 -14.221 13.692 47.717 1 58.81 ? O2 EDO 401 A 1 # _model_server_stats.io_time_ms 59 _model_server_stats.parse_time_ms 35 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 419 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #