data_6J17
#
_model_server_result.job_id            dGlXee50w3Sc0B_qx4Ap3w 
_model_server_result.datetime_utc      '2024-11-28 08:53:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6j17 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1401}' 
#
_entry.id    6J17 
#
_exptl.entry_id    6J17 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6J17 
_cell.length_a            53.363 
_cell.length_b            56.628 
_cell.length_c            93.532 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6J17 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OG1 THR 100 A THR 1114 1_555 C MG MG . A MG 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc2 B O2G ATP . A ATP 1401 1_555 C MG MG . A MG 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
metalc ? metalc3 B O1B ATP . A ATP 1401 1_555 C MG MG . A MG 1402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.222 ? 
metalc ? metalc4 C MG MG . A MG 1402 1_555 D O HOH . A HOH 1539 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
metalc ? metalc5 C MG MG . A MG 1402 1_555 D O HOH . A HOH 1553 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc6 C MG MG . A MG 1402 1_555 D O HOH . A HOH 1583 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 70 n n 
PG O2G ATP sing 71 n n 
PG O3G ATP sing 72 n n 
PG O3B ATP sing 73 n n 
O2G HOG2 ATP sing 74 n n 
O3G HOG3 ATP sing 75 n n 
PB O1B ATP doub 76 n n 
PB O2B ATP sing 77 n n 
PB O3B ATP sing 78 n n 
PB O3A ATP sing 79 n n 
O2B HOB2 ATP sing 80 n n 
PA O1A ATP doub 81 n n 
PA O2A ATP sing 82 n n 
PA O3A ATP sing 83 n n 
PA O5' ATP sing 84 n n 
O2A HOA2 ATP sing 85 n n 
O5' C5' ATP sing 86 n n 
C5' C4' ATP sing 87 n n 
C5' "H5'1" ATP sing 88 n n 
C5' "H5'2" ATP sing 89 n n 
C4' O4' ATP sing 90 n n 
C4' C3' ATP sing 91 n n 
C4' H4' ATP sing 92 n n 
O4' C1' ATP sing 93 n n 
C3' O3' ATP sing 94 n n 
C3' C2' ATP sing 95 n n 
C3' H3' ATP sing 96 n n 
O3' HO3' ATP sing 97 n n 
C2' O2' ATP sing 98 n n 
C2' C1' ATP sing 99 n n 
C2' H2' ATP sing 100 n n 
O2' HO2' ATP sing 101 n n 
C1' N9 ATP sing 102 n n 
C1' H1' ATP sing 103 n n 
N9 C8 ATP sing 104 n y 
N9 C4 ATP sing 105 n y 
C8 N7 ATP doub 106 n y 
C8 H8 ATP sing 107 n n 
N7 C5 ATP sing 108 n y 
C5 C6 ATP sing 109 n y 
C5 C4 ATP doub 110 n y 
C6 N6 ATP sing 111 n n 
C6 N1 ATP doub 112 n y 
N6 HN61 ATP sing 113 n n 
N6 HN62 ATP sing 114 n n 
N1 C2 ATP sing 115 n y 
C2 N3 ATP doub 116 n y 
C2 H2 ATP sing 117 n n 
N3 C4 ATP sing 118 n y 
#
_atom_sites.entry_id                     6J17 
_atom_sites.fract_transf_matrix[1][1]    0.01874 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017659 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010692 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ATP A 1 1401 1 ATP ATP . 
C 3 MG A 1 1402 1 MG MG . 
D 4 HOH A 1 1501 138 HOH HOH . 
D 4 HOH A 2 1502 147 HOH HOH . 
D 4 HOH A 3 1503 148 HOH HOH . 
D 4 HOH A 4 1504 40 HOH HOH . 
D 4 HOH A 5 1505 102 HOH HOH . 
D 4 HOH A 6 1506 136 HOH HOH . 
D 4 HOH A 7 1507 88 HOH HOH . 
D 4 HOH A 8 1508 106 HOH HOH . 
D 4 HOH A 9 1509 21 HOH HOH . 
D 4 HOH A 10 1510 63 HOH HOH . 
D 4 HOH A 11 1511 50 HOH HOH . 
D 4 HOH A 12 1512 134 HOH HOH . 
D 4 HOH A 13 1513 133 HOH HOH . 
D 4 HOH A 14 1514 81 HOH HOH . 
D 4 HOH A 15 1515 10 HOH HOH . 
D 4 HOH A 16 1516 45 HOH HOH . 
D 4 HOH A 17 1517 31 HOH HOH . 
D 4 HOH A 18 1518 95 HOH HOH . 
D 4 HOH A 19 1519 94 HOH HOH . 
D 4 HOH A 20 1520 17 HOH HOH . 
D 4 HOH A 21 1521 74 HOH HOH . 
D 4 HOH A 22 1522 76 HOH HOH . 
D 4 HOH A 23 1523 20 HOH HOH . 
D 4 HOH A 24 1524 44 HOH HOH . 
D 4 HOH A 25 1525 33 HOH HOH . 
D 4 HOH A 26 1526 5 HOH HOH . 
D 4 HOH A 27 1527 22 HOH HOH . 
D 4 HOH A 28 1528 108 HOH HOH . 
D 4 HOH A 29 1529 59 HOH HOH . 
D 4 HOH A 30 1530 2 HOH HOH . 
D 4 HOH A 31 1531 14 HOH HOH . 
D 4 HOH A 32 1532 30 HOH HOH . 
D 4 HOH A 33 1533 72 HOH HOH . 
D 4 HOH A 34 1534 26 HOH HOH . 
D 4 HOH A 35 1535 86 HOH HOH . 
D 4 HOH A 36 1536 6 HOH HOH . 
D 4 HOH A 37 1537 18 HOH HOH . 
D 4 HOH A 38 1538 19 HOH HOH . 
D 4 HOH A 39 1539 69 HOH HOH . 
D 4 HOH A 40 1540 15 HOH HOH . 
D 4 HOH A 41 1541 1 HOH HOH . 
D 4 HOH A 42 1542 140 HOH HOH . 
D 4 HOH A 43 1543 55 HOH HOH . 
D 4 HOH A 44 1544 23 HOH HOH . 
D 4 HOH A 45 1545 137 HOH HOH . 
D 4 HOH A 46 1546 28 HOH HOH . 
D 4 HOH A 47 1547 100 HOH HOH . 
D 4 HOH A 48 1548 12 HOH HOH . 
D 4 HOH A 49 1549 101 HOH HOH . 
D 4 HOH A 50 1550 123 HOH HOH . 
D 4 HOH A 51 1551 34 HOH HOH . 
D 4 HOH A 52 1552 13 HOH HOH . 
D 4 HOH A 53 1553 70 HOH HOH . 
D 4 HOH A 54 1554 75 HOH HOH . 
D 4 HOH A 55 1555 139 HOH HOH . 
D 4 HOH A 56 1556 42 HOH HOH . 
D 4 HOH A 57 1557 39 HOH HOH . 
D 4 HOH A 58 1558 32 HOH HOH . 
D 4 HOH A 59 1559 112 HOH HOH . 
D 4 HOH A 60 1560 41 HOH HOH . 
D 4 HOH A 61 1561 16 HOH HOH . 
D 4 HOH A 62 1562 51 HOH HOH . 
D 4 HOH A 63 1563 61 HOH HOH . 
D 4 HOH A 64 1564 54 HOH HOH . 
D 4 HOH A 65 1565 27 HOH HOH . 
D 4 HOH A 66 1566 110 HOH HOH . 
D 4 HOH A 67 1567 25 HOH HOH . 
D 4 HOH A 68 1568 143 HOH HOH . 
D 4 HOH A 69 1569 124 HOH HOH . 
D 4 HOH A 70 1570 4 HOH HOH . 
D 4 HOH A 71 1571 119 HOH HOH . 
D 4 HOH A 72 1572 113 HOH HOH . 
D 4 HOH A 73 1573 126 HOH HOH . 
D 4 HOH A 74 1574 8 HOH HOH . 
D 4 HOH A 75 1575 98 HOH HOH . 
D 4 HOH A 76 1576 71 HOH HOH . 
D 4 HOH A 77 1577 122 HOH HOH . 
D 4 HOH A 78 1578 125 HOH HOH . 
D 4 HOH A 79 1579 60 HOH HOH . 
D 4 HOH A 80 1580 62 HOH HOH . 
D 4 HOH A 81 1581 78 HOH HOH . 
D 4 HOH A 82 1582 109 HOH HOH . 
D 4 HOH A 83 1583 117 HOH HOH . 
D 4 HOH A 84 1584 118 HOH HOH . 
D 4 HOH A 85 1585 7 HOH HOH . 
D 4 HOH A 86 1586 96 HOH HOH . 
D 4 HOH A 87 1587 57 HOH HOH . 
D 4 HOH A 88 1588 3 HOH HOH . 
D 4 HOH A 89 1589 47 HOH HOH . 
D 4 HOH A 90 1590 29 HOH HOH . 
D 4 HOH A 91 1591 38 HOH HOH . 
D 4 HOH A 92 1592 85 HOH HOH . 
D 4 HOH A 93 1593 9 HOH HOH . 
D 4 HOH A 94 1594 56 HOH HOH . 
D 4 HOH A 95 1595 80 HOH HOH . 
D 4 HOH A 96 1596 105 HOH HOH . 
D 4 HOH A 97 1597 43 HOH HOH . 
D 4 HOH A 98 1598 104 HOH HOH . 
D 4 HOH A 99 1599 77 HOH HOH . 
D 4 HOH A 100 1600 65 HOH HOH . 
D 4 HOH A 101 1601 35 HOH HOH . 
D 4 HOH A 102 1602 84 HOH HOH . 
D 4 HOH A 103 1603 103 HOH HOH . 
D 4 HOH A 104 1604 141 HOH HOH . 
D 4 HOH A 105 1605 90 HOH HOH . 
D 4 HOH A 106 1606 120 HOH HOH . 
D 4 HOH A 107 1607 53 HOH HOH . 
D 4 HOH A 108 1608 144 HOH HOH . 
D 4 HOH A 109 1609 142 HOH HOH . 
D 4 HOH A 110 1610 121 HOH HOH . 
D 4 HOH A 111 1611 92 HOH HOH . 
D 4 HOH A 112 1612 115 HOH HOH . 
D 4 HOH A 113 1613 91 HOH HOH . 
D 4 HOH A 114 1614 83 HOH HOH . 
D 4 HOH A 115 1615 82 HOH HOH . 
D 4 HOH A 116 1616 87 HOH HOH . 
D 4 HOH A 117 1617 64 HOH HOH . 
D 4 HOH A 118 1618 67 HOH HOH . 
D 4 HOH A 119 1619 66 HOH HOH . 
D 4 HOH A 120 1620 146 HOH HOH . 
D 4 HOH A 121 1621 128 HOH HOH . 
D 4 HOH A 122 1622 135 HOH HOH . 
D 4 HOH A 123 1623 37 HOH HOH . 
D 4 HOH A 124 1624 49 HOH HOH . 
D 4 HOH A 125 1625 132 HOH HOH . 
D 4 HOH A 126 1626 131 HOH HOH . 
D 4 HOH A 127 1627 127 HOH HOH . 
D 4 HOH A 128 1628 93 HOH HOH . 
D 4 HOH A 129 1629 24 HOH HOH . 
D 4 HOH A 130 1630 11 HOH HOH . 
D 4 HOH A 131 1631 68 HOH HOH . 
D 4 HOH A 132 1632 52 HOH HOH . 
D 4 HOH A 133 1633 107 HOH HOH . 
D 4 HOH A 134 1634 89 HOH HOH . 
D 4 HOH A 135 1635 58 HOH HOH . 
D 4 HOH A 136 1636 46 HOH HOH . 
D 4 HOH A 137 1637 114 HOH HOH . 
D 4 HOH A 138 1638 79 HOH HOH . 
D 4 HOH A 139 1639 36 HOH HOH . 
D 4 HOH A 140 1640 48 HOH HOH . 
D 4 HOH A 141 1641 111 HOH HOH . 
D 4 HOH A 142 1642 130 HOH HOH . 
D 4 HOH A 143 1643 145 HOH HOH . 
D 4 HOH A 144 1644 116 HOH HOH . 
D 4 HOH A 145 1645 129 HOH HOH . 
D 4 HOH A 146 1646 73 HOH HOH . 
D 4 HOH A 147 1647 97 HOH HOH . 
D 4 HOH A 148 1648 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . B 2 22.156 -12.999 21.259 1 26.11 ? PG ATP 1401 A 1 
HETATM 2 O O1G ATP . . . B 2 22.035 -14.47 21.306 1 25.31 ? O1G ATP 1401 A 1 
HETATM 3 O O2G ATP . . . B 2 21.319 -12.372 20.2 1 24.78 ? O2G ATP 1401 A 1 
HETATM 4 O O3G ATP . . . B 2 23.566 -12.455 21.299 1 26.68 ? O3G ATP 1401 A 1 
HETATM 5 P PB ATP . . . B 2 20.779 -11.086 22.96 1 23.83 ? PB ATP 1401 A 1 
HETATM 6 O O1B ATP . . . B 2 19.616 -10.762 22.069 1 21.77 ? O1B ATP 1401 A 1 
HETATM 7 O O2B ATP . . . B 2 21.869 -10.075 23.243 1 21.84 ? O2B ATP 1401 A 1 
HETATM 8 O O3B ATP . . . B 2 21.461 -12.52 22.665 1 22.68 ? O3B ATP 1401 A 1 
HETATM 9 P PA ATP . . . B 2 18.599 -11.74 24.701 1 24.17 ? PA ATP 1401 A 1 
HETATM 10 O O1A ATP . . . B 2 17.775 -10.453 24.619 1 23.61 ? O1A ATP 1401 A 1 
HETATM 11 O O2A ATP . . . B 2 18.184 -12.926 23.895 1 31.66 ? O2A ATP 1401 A 1 
HETATM 12 O O3A ATP . . . B 2 20.153 -11.404 24.423 1 25.91 ? O3A ATP 1401 A 1 
HETATM 13 O O5' ATP . . . B 2 18.741 -12.137 26.257 1 22.11 ? O5' ATP 1401 A 1 
HETATM 14 C C5' ATP . . . B 2 19.362 -13.337 26.685 1 23.75 ? C5' ATP 1401 A 1 
HETATM 15 C C4' ATP . . . B 2 19.074 -13.498 28.196 1 26.09 ? C4' ATP 1401 A 1 
HETATM 16 O O4' ATP . . . B 2 19.715 -12.477 28.918 1 30.28 ? O4' ATP 1401 A 1 
HETATM 17 C C3' ATP . . . B 2 17.623 -13.411 28.629 1 25.62 ? C3' ATP 1401 A 1 
HETATM 18 O O3' ATP . . . B 2 17.083 -14.736 28.484 1 32.19 ? O3' ATP 1401 A 1 
HETATM 19 C C2' ATP . . . B 2 17.773 -13.037 30.059 1 29.13 ? C2' ATP 1401 A 1 
HETATM 20 O O2' ATP . . . B 2 18.259 -14.191 30.788 1 30.55 ? O2' ATP 1401 A 1 
HETATM 21 C C1' ATP . . . B 2 18.945 -12.09 30.037 1 26.03 ? C1' ATP 1401 A 1 
HETATM 22 N N9 ATP . . . B 2 18.463 -10.715 29.78 1 29.53 ? N9 ATP 1401 A 1 
HETATM 23 C C8 ATP . . . B 2 18.318 -10.078 28.575 1 24.5 ? C8 ATP 1401 A 1 
HETATM 24 N N7 ATP . . . B 2 17.839 -8.808 28.787 1 23.29 ? N7 ATP 1401 A 1 
HETATM 25 C C5 ATP . . . B 2 17.714 -8.634 30.116 1 24.88 ? C5 ATP 1401 A 1 
HETATM 26 C C6 ATP . . . B 2 17.21 -7.566 30.988 1 23.77 ? C6 ATP 1401 A 1 
HETATM 27 N N6 ATP . . . B 2 16.854 -6.407 30.404 1 25.01 ? N6 ATP 1401 A 1 
HETATM 28 N N1 ATP . . . B 2 17.22 -7.755 32.343 1 27.29 ? N1 ATP 1401 A 1 
HETATM 29 C C2 ATP . . . B 2 17.621 -8.965 32.884 1 29.76 ? C2 ATP 1401 A 1 
HETATM 30 N N3 ATP . . . B 2 18.045 -9.986 32.097 1 28.12 ? N3 ATP 1401 A 1 
HETATM 31 C C4 ATP . . . B 2 18.116 -9.885 30.762 1 26.88 ? C4 ATP 1401 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           31 
#