data_6J21 # _model_server_result.job_id ZGCHto_Ohya5SR6L3DdySA _model_server_result.datetime_utc '2024-12-27 01:48:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j21 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1202}' # _entry.id 6J21 # _exptl.entry_id 6J21 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6J21 _cell.length_a 103.11 _cell.length_b 103.11 _cell.length_c 158.16 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J21 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 104 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 105 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 179 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 180 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.038 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 296 n n C10 C9 OLC doub 297 n n C10 C11 OLC sing 298 n n C9 C8 OLC sing 299 n n C17 C16 OLC sing 300 z n C11 C12 OLC sing 301 n n C8 C7 OLC sing 302 n n C24 C22 OLC sing 303 n n C24 O25 OLC sing 304 n n C16 C15 OLC sing 305 n n C12 C13 OLC sing 306 n n C7 C6 OLC sing 307 n n C15 C14 OLC sing 308 n n C13 C14 OLC sing 309 n n C6 C5 OLC sing 310 n n C5 C4 OLC sing 311 n n C4 C3 OLC sing 312 n n C3 C2 OLC sing 313 n n C2 C1 OLC sing 314 n n C21 C22 OLC sing 315 n n C21 O20 OLC sing 316 n n C1 O19 OLC doub 317 n n C1 O20 OLC sing 318 n n C22 O23 OLC sing 319 n n C18 H18 OLC sing 320 n n C18 H18A OLC sing 321 n n C18 H18B OLC sing 322 n n C10 H10 OLC sing 323 n n C9 H9 OLC sing 324 n n C17 H17 OLC sing 325 n n C17 H17A OLC sing 326 n n C11 H11 OLC sing 327 n n C11 H11A OLC sing 328 n n C8 H8 OLC sing 329 n n C8 H8A OLC sing 330 n n C24 H24 OLC sing 331 n n C24 H24A OLC sing 332 n n C16 H16 OLC sing 333 n n C16 H16A OLC sing 334 n n C12 H12 OLC sing 335 n n C12 H12A OLC sing 336 n n C7 H7 OLC sing 337 n n C7 H7A OLC sing 338 n n C15 H15 OLC sing 339 n n C15 H15A OLC sing 340 n n C13 H13 OLC sing 341 n n C13 H13A OLC sing 342 n n C6 H6 OLC sing 343 n n C6 H6A OLC sing 344 n n C14 H14 OLC sing 345 n n C14 H14A OLC sing 346 n n C5 H5 OLC sing 347 n n C5 H5A OLC sing 348 n n C4 H4 OLC sing 349 n n C4 H4A OLC sing 350 n n C3 H3 OLC sing 351 n n C3 H3A OLC sing 352 n n C2 H2 OLC sing 353 n n C2 H2A OLC sing 354 n n C21 H21 OLC sing 355 n n C21 H21A OLC sing 356 n n C22 H22 OLC sing 357 n n O25 HO25 OLC sing 358 n n O23 HO23 OLC sing 359 n n # _atom_sites.entry_id 6J21 _atom_sites.fract_transf_matrix[1][1] 0.009698 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009698 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GBQ A 1 1201 1 GBQ GBQ . C 3 OLC A 1 1202 1 OLC OLC . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 OLC . . . C 3 2.068 142.827 190.476 1 108.59 ? C10 OLC 1202 A 1 HETATM 2 C C9 OLC . . . C 3 2.115 142.637 188.932 1 108.89 ? C9 OLC 1202 A 1 HETATM 3 C C11 OLC . . . C 3 0.932 142.193 191.297 1 106.78 ? C11 OLC 1202 A 1 HETATM 4 C C8 OLC . . . C 3 1.016 141.828 188.223 1 107.85 ? C8 OLC 1202 A 1 HETATM 5 C C24 OLC . . . C 3 -6.039 146.634 178.959 1 138.44 ? C24 OLC 1202 A 1 HETATM 6 C C12 OLC . . . C 3 1.544 141.441 192.479 1 105.94 ? C12 OLC 1202 A 1 HETATM 7 C C7 OLC . . . C 3 0.096 142.803 187.492 1 108.16 ? C7 OLC 1202 A 1 HETATM 8 C C6 OLC . . . C 3 0.157 142.558 185.987 1 110.27 ? C6 OLC 1202 A 1 HETATM 9 C C5 OLC . . . C 3 -0.509 143.726 185.259 1 113.75 ? C5 OLC 1202 A 1 HETATM 10 C C4 OLC . . . C 3 -1.669 143.232 184.386 1 117.61 ? C4 OLC 1202 A 1 HETATM 11 C C3 OLC . . . C 3 -1.263 143.295 182.908 1 122.32 ? C3 OLC 1202 A 1 HETATM 12 C C2 OLC . . . C 3 -1.952 144.477 182.203 1 127.24 ? C2 OLC 1202 A 1 HETATM 13 C C21 OLC . . . C 3 -4.011 145.125 179.273 1 136.88 ? C21 OLC 1202 A 1 HETATM 14 C C1 OLC . . . C 3 -2.634 144.036 180.889 1 132.34 ? C1 OLC 1202 A 1 HETATM 15 C C22 OLC . . . C 3 -5.521 145.174 178.957 1 137.74 ? C22 OLC 1202 A 1 HETATM 16 O O19 OLC . . . C 3 -2.147 143.153 180.175 1 132.99 ? O19 OLC 1202 A 1 HETATM 17 O O25 OLC . . . C 3 -6.224 147.146 180.296 1 138.02 ? O25 OLC 1202 A 1 HETATM 18 O O23 OLC . . . C 3 -5.78 144.548 177.684 1 136.51 ? O23 OLC 1202 A 1 HETATM 19 O O20 OLC . . . C 3 -3.82 144.672 180.63 1 135.48 ? O20 OLC 1202 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 19 #