data_6J2L # _model_server_result.job_id qJ4zzX3z-0if4w6kEGQmzg _model_server_result.datetime_utc '2024-10-15 11:19:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j2l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":302}' # _entry.id 6J2L # _exptl.entry_id 6J2L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.53 _cell.angle_gamma 90 _cell.entry_id 6J2L _cell.length_a 169.05 _cell.length_b 45.23 _cell.length_c 65.259 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J2L _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 79 A ASP 80 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc2 A OD1 ASP 81 A ASP 82 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? metalc ? metalc3 A OD1 ASP 83 A ASP 84 1_555 C ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.945 ? metalc ? metalc4 A SG CYS 96 A CYS 97 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.474 ? metalc ? metalc5 A NE2 HIS 97 A HIS 98 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc6 A SG CYS 103 A CYS 104 1_555 D ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc7 A OE1 GLU 152 A GLU 153 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.176 ? metalc ? metalc8 A OE1 GLU 171 A GLU 172 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.967 ? metalc ? metalc9 A OD2 ASP 174 A ASP 175 1_555 E ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? metalc ? metalc10 C ZN ZN . A ZN 301 1_555 I O HOH . A HOH 421 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? metalc ? metalc11 C ZN ZN . A ZN 301 1_555 J O HOH . B HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.14 ? metalc ? metalc12 D ZN ZN . A ZN 302 1_555 B SG CYS 80 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? metalc ? metalc13 F ZN ZN . A ZN 304 1_555 B SG CYS 80 B CYS 81 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.503 ? metalc ? metalc14 I O HOH . A HOH 423 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? metalc ? metalc15 B OD2 ASP 79 B ASP 80 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc16 B OD1 ASP 81 B ASP 82 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc17 B OD1 ASP 83 B ASP 84 1_555 H ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.878 ? metalc ? metalc18 B OE2 GLU 152 B GLU 153 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.873 ? metalc ? metalc19 B OE1 GLU 155 B GLU 156 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.579 ? metalc ? metalc20 B OE2 GLU 171 B GLU 172 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc21 B OD2 ASP 174 B ASP 175 1_555 G MG MG . B MG 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.701 ? metalc ? metalc22 H ZN ZN . B ZN 302 1_555 J O HOH . B HOH 415 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.263 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6J2L _atom_sites.fract_transf_matrix[1][1] 0.005915 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002454 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022109 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01659 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 301 205 ZN ZN . D 2 ZN A 1 302 1 ZN ZN . E 2 ZN A 1 303 4 ZN ZN . F 2 ZN A 1 304 1 ZN ZN . G 3 MG B 1 301 4 MG MG . H 2 ZN B 1 302 5 ZN ZN . I 4 HOH A 1 401 26 HOH HOH . I 4 HOH A 2 402 54 HOH HOH . I 4 HOH A 3 403 11 HOH HOH . I 4 HOH A 4 404 61 HOH HOH . I 4 HOH A 5 405 5 HOH HOH . I 4 HOH A 6 406 74 HOH HOH . I 4 HOH A 7 407 15 HOH HOH . I 4 HOH A 8 408 89 HOH HOH . I 4 HOH A 9 409 102 HOH HOH . I 4 HOH A 10 410 37 HOH HOH . I 4 HOH A 11 411 20 HOH HOH . I 4 HOH A 12 412 35 HOH HOH . I 4 HOH A 13 413 40 HOH HOH . I 4 HOH A 14 414 85 HOH HOH . I 4 HOH A 15 415 3 HOH HOH . I 4 HOH A 16 416 17 HOH HOH . I 4 HOH A 17 417 32 HOH HOH . I 4 HOH A 18 418 9 HOH HOH . I 4 HOH A 19 419 8 HOH HOH . I 4 HOH A 20 420 38 HOH HOH . I 4 HOH A 21 421 65 HOH HOH . I 4 HOH A 22 422 18 HOH HOH . I 4 HOH A 23 423 29 HOH HOH . I 4 HOH A 24 424 82 HOH HOH . I 4 HOH A 25 425 108 HOH HOH . I 4 HOH A 26 426 4 HOH HOH . I 4 HOH A 27 427 59 HOH HOH . I 4 HOH A 28 428 52 HOH HOH . I 4 HOH A 29 429 73 HOH HOH . I 4 HOH A 30 430 105 HOH HOH . I 4 HOH A 31 431 41 HOH HOH . I 4 HOH A 32 432 25 HOH HOH . I 4 HOH A 33 433 103 HOH HOH . I 4 HOH A 34 434 66 HOH HOH . I 4 HOH A 35 435 69 HOH HOH . I 4 HOH A 36 436 19 HOH HOH . I 4 HOH A 37 437 100 HOH HOH . I 4 HOH A 38 438 39 HOH HOH . I 4 HOH A 39 439 21 HOH HOH . I 4 HOH A 40 440 45 HOH HOH . I 4 HOH A 41 441 104 HOH HOH . I 4 HOH A 42 442 50 HOH HOH . I 4 HOH A 43 443 57 HOH HOH . I 4 HOH A 44 444 48 HOH HOH . I 4 HOH A 45 445 56 HOH HOH . I 4 HOH A 46 446 64 HOH HOH . I 4 HOH A 47 447 72 HOH HOH . I 4 HOH A 48 448 109 HOH HOH . I 4 HOH A 49 449 63 HOH HOH . I 4 HOH A 50 450 101 HOH HOH . I 4 HOH A 51 451 23 HOH HOH . I 4 HOH A 52 452 93 HOH HOH . I 4 HOH A 53 453 107 HOH HOH . I 4 HOH A 54 454 42 HOH HOH . I 4 HOH A 55 455 47 HOH HOH . I 4 HOH A 56 456 55 HOH HOH . I 4 HOH A 57 457 106 HOH HOH . I 4 HOH A 58 458 80 HOH HOH . I 4 HOH A 59 459 58 HOH HOH . I 4 HOH A 60 460 96 HOH HOH . J 4 HOH B 1 401 34 HOH HOH . J 4 HOH B 2 402 95 HOH HOH . J 4 HOH B 3 403 83 HOH HOH . J 4 HOH B 4 404 90 HOH HOH . J 4 HOH B 5 405 2 HOH HOH . J 4 HOH B 6 406 43 HOH HOH . J 4 HOH B 7 407 14 HOH HOH . J 4 HOH B 8 408 6 HOH HOH . J 4 HOH B 9 409 28 HOH HOH . J 4 HOH B 10 410 13 HOH HOH . J 4 HOH B 11 411 12 HOH HOH . J 4 HOH B 12 412 110 HOH HOH . J 4 HOH B 13 413 1 HOH HOH . J 4 HOH B 14 414 33 HOH HOH . J 4 HOH B 15 415 44 HOH HOH . J 4 HOH B 16 416 31 HOH HOH . J 4 HOH B 17 417 98 HOH HOH . J 4 HOH B 18 418 16 HOH HOH . J 4 HOH B 19 419 62 HOH HOH . J 4 HOH B 20 420 76 HOH HOH . J 4 HOH B 21 421 86 HOH HOH . J 4 HOH B 22 422 46 HOH HOH . J 4 HOH B 23 423 94 HOH HOH . J 4 HOH B 24 424 30 HOH HOH . J 4 HOH B 25 425 97 HOH HOH . J 4 HOH B 26 426 75 HOH HOH . J 4 HOH B 27 427 68 HOH HOH . J 4 HOH B 28 428 88 HOH HOH . J 4 HOH B 29 429 7 HOH HOH . J 4 HOH B 30 430 70 HOH HOH . J 4 HOH B 31 431 10 HOH HOH . J 4 HOH B 32 432 79 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 2 _atom_site.Cartn_x 38.793 _atom_site.Cartn_y 34.217 _atom_site.Cartn_z 22.477 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 52.64 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #