data_6J3E # _model_server_result.job_id zuwKPdhMZsMAz6fzpUZAkw _model_server_result.datetime_utc '2024-10-20 01:24:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j3e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":301}' # _entry.id 6J3E # _exptl.entry_id 6J3E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 14 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6J3E _cell.length_a 75.236 _cell.length_b 105.207 _cell.length_c 91.703 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J3E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6J3E _atom_sites.fract_transf_matrix[1][1] 0.013292 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009505 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010905 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 1 EDO EDO . D 2 EDO A 1 302 6 EDO EDO . E 2 EDO A 1 303 7 EDO EDO . F 2 EDO A 1 304 8 EDO EDO . G 2 EDO A 1 305 12 EDO EDO . H 2 EDO B 1 301 2 EDO EDO . I 2 EDO B 1 302 3 EDO EDO . J 2 EDO B 1 303 4 EDO EDO . K 2 EDO B 1 304 5 EDO EDO . L 2 EDO B 1 305 9 EDO EDO . M 2 EDO B 1 306 10 EDO EDO . N 2 EDO B 1 307 11 EDO EDO . O 2 EDO B 1 308 13 EDO EDO . P 2 EDO B 1 309 14 EDO EDO . Q 3 HOH A 1 401 92 HOH HOH . Q 3 HOH A 2 402 71 HOH HOH . Q 3 HOH A 3 403 68 HOH HOH . Q 3 HOH A 4 404 90 HOH HOH . Q 3 HOH A 5 405 56 HOH HOH . Q 3 HOH A 6 406 79 HOH HOH . Q 3 HOH A 7 407 42 HOH HOH . Q 3 HOH A 8 408 91 HOH HOH . Q 3 HOH A 9 409 88 HOH HOH . Q 3 HOH A 10 410 62 HOH HOH . Q 3 HOH A 11 411 58 HOH HOH . Q 3 HOH A 12 412 72 HOH HOH . Q 3 HOH A 13 413 82 HOH HOH . Q 3 HOH A 14 414 49 HOH HOH . Q 3 HOH A 15 415 12 HOH HOH . Q 3 HOH A 16 416 50 HOH HOH . Q 3 HOH A 17 417 51 HOH HOH . Q 3 HOH A 18 418 13 HOH HOH . Q 3 HOH A 19 419 40 HOH HOH . Q 3 HOH A 20 420 89 HOH HOH . Q 3 HOH A 21 421 6 HOH HOH . Q 3 HOH A 22 422 60 HOH HOH . Q 3 HOH A 23 423 59 HOH HOH . Q 3 HOH A 24 424 23 HOH HOH . Q 3 HOH A 25 425 69 HOH HOH . Q 3 HOH A 26 426 61 HOH HOH . Q 3 HOH A 27 427 53 HOH HOH . Q 3 HOH A 28 428 8 HOH HOH . Q 3 HOH A 29 429 74 HOH HOH . Q 3 HOH A 30 430 76 HOH HOH . Q 3 HOH A 31 431 38 HOH HOH . Q 3 HOH A 32 432 37 HOH HOH . Q 3 HOH A 33 433 55 HOH HOH . Q 3 HOH A 34 434 86 HOH HOH . Q 3 HOH A 35 435 52 HOH HOH . Q 3 HOH A 36 436 77 HOH HOH . Q 3 HOH A 37 437 14 HOH HOH . Q 3 HOH A 38 438 87 HOH HOH . Q 3 HOH A 39 439 39 HOH HOH . Q 3 HOH A 40 440 57 HOH HOH . Q 3 HOH A 41 441 75 HOH HOH . Q 3 HOH A 42 442 54 HOH HOH . Q 3 HOH A 43 443 81 HOH HOH . Q 3 HOH A 44 444 70 HOH HOH . Q 3 HOH A 45 445 67 HOH HOH . R 3 HOH B 1 401 48 HOH HOH . R 3 HOH B 2 402 97 HOH HOH . R 3 HOH B 3 403 107 HOH HOH . R 3 HOH B 4 404 64 HOH HOH . R 3 HOH B 5 405 80 HOH HOH . R 3 HOH B 6 406 103 HOH HOH . R 3 HOH B 7 407 46 HOH HOH . R 3 HOH B 8 408 85 HOH HOH . R 3 HOH B 9 409 98 HOH HOH . R 3 HOH B 10 410 94 HOH HOH . R 3 HOH B 11 411 25 HOH HOH . R 3 HOH B 12 412 106 HOH HOH . R 3 HOH B 13 413 30 HOH HOH . R 3 HOH B 14 414 63 HOH HOH . R 3 HOH B 15 415 26 HOH HOH . R 3 HOH B 16 416 19 HOH HOH . R 3 HOH B 17 417 10 HOH HOH . R 3 HOH B 18 418 83 HOH HOH . R 3 HOH B 19 419 16 HOH HOH . R 3 HOH B 20 420 93 HOH HOH . R 3 HOH B 21 421 9 HOH HOH . R 3 HOH B 22 422 1 HOH HOH . R 3 HOH B 23 423 102 HOH HOH . R 3 HOH B 24 424 35 HOH HOH . R 3 HOH B 25 425 27 HOH HOH . R 3 HOH B 26 426 101 HOH HOH . R 3 HOH B 27 427 15 HOH HOH . R 3 HOH B 28 428 18 HOH HOH . R 3 HOH B 29 429 73 HOH HOH . R 3 HOH B 30 430 47 HOH HOH . R 3 HOH B 31 431 20 HOH HOH . R 3 HOH B 32 432 44 HOH HOH . R 3 HOH B 33 433 96 HOH HOH . R 3 HOH B 34 434 41 HOH HOH . R 3 HOH B 35 435 95 HOH HOH . R 3 HOH B 36 436 84 HOH HOH . R 3 HOH B 37 437 78 HOH HOH . R 3 HOH B 38 438 100 HOH HOH . R 3 HOH B 39 439 105 HOH HOH . R 3 HOH B 40 440 104 HOH HOH . R 3 HOH B 41 441 66 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 2 39.941 43.276 26.389 1 51.67 ? C1 EDO 301 B 1 HETATM 2 O O1 EDO . . . H 2 38.71 43.741 25.809 1 59.91 ? O1 EDO 301 B 1 HETATM 3 C C2 EDO . . . H 2 40.487 42.123 25.556 1 54.5 ? C2 EDO 301 B 1 HETATM 4 O O2 EDO . . . H 2 40.533 42.548 24.186 1 57.47 ? O2 EDO 301 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 256 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #