data_6J3N # _model_server_result.job_id UJHA_qY7p0uyt6IHp9OFvw _model_server_result.datetime_utc '2024-11-12 21:14:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j3n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 6J3N # _exptl.entry_id 6J3N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 454.684 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(5beta)-3-oxours-12-en-28-oic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6J3N _cell.length_a 61.93 _cell.length_b 61.93 _cell.length_c 155.87 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J3N _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H46 O3' _chem_comp.formula_weight 454.684 _chem_comp.id B8F _chem_comp.mon_nstd_flag . _chem_comp.name '(5beta)-3-oxours-12-en-28-oic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Ursonic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 C3 B8F sing 70 n n C4 C5 B8F sing 71 n n C23 C2 B8F sing 72 n n C3 O1 B8F doub 73 n n C3 C2 B8F sing 74 n n C5 C6 B8F sing 75 n n C26 C19 B8F sing 76 n n C27 C20 B8F sing 77 n n C30 C14 B8F sing 78 n n C2 C1 B8F sing 79 n n C2 C24 B8F sing 80 n n C1 C6 B8F sing 81 n n C1 C10 B8F sing 82 n n C19 C20 B8F sing 83 n n C19 C15 B8F sing 84 n n C6 C7 B8F sing 85 n n C6 C25 B8F sing 86 n n C7 C11 B8F sing 87 n n C7 C8 B8F sing 88 n n C20 C21 B8F sing 89 n n C11 C12 B8F sing 90 n n C9 C10 B8F sing 91 n n C9 C8 B8F sing 92 n n C14 C13 B8F sing 93 n n C14 C8 B8F sing 94 n n C14 C18 B8F sing 95 n n C12 C13 B8F doub 96 n n C13 C15 B8F sing 97 n n C8 C29 B8F sing 98 n n C15 C16 B8F sing 99 n n C21 C22 B8F sing 100 n n C18 C17 B8F sing 101 n n C17 C16 B8F sing 102 n n C16 C22 B8F sing 103 n n C16 C28 B8F sing 104 n n C28 O2 B8F doub 105 n n C28 O3 B8F sing 106 n n C4 H1 B8F sing 107 n n C4 H2 B8F sing 108 n n C5 H3 B8F sing 109 n n C5 H4 B8F sing 110 n n C11 H5 B8F sing 111 n n C11 H6 B8F sing 112 n n C7 H7 B8F sing 113 n n C9 H8 B8F sing 114 n n C9 H9 B8F sing 115 n n C10 H10 B8F sing 116 n n C10 H11 B8F sing 117 n n C12 H12 B8F sing 118 n n C1 H13 B8F sing 119 n n C15 H14 B8F sing 120 n n C17 H15 B8F sing 121 n n C17 H16 B8F sing 122 n n C18 H17 B8F sing 123 n n C18 H18 B8F sing 124 n n C19 H19 B8F sing 125 n n C20 H20 B8F sing 126 n n C21 H21 B8F sing 127 n n C21 H22 B8F sing 128 n n C22 H23 B8F sing 129 n n C22 H24 B8F sing 130 n n C23 H25 B8F sing 131 n n C23 H26 B8F sing 132 n n C23 H27 B8F sing 133 n n C24 H28 B8F sing 134 n n C24 H29 B8F sing 135 n n C24 H30 B8F sing 136 n n C25 H31 B8F sing 137 n n C25 H32 B8F sing 138 n n C25 H33 B8F sing 139 n n C26 H34 B8F sing 140 n n C26 H35 B8F sing 141 n n C26 H36 B8F sing 142 n n C27 H37 B8F sing 143 n n C27 H38 B8F sing 144 n n C27 H39 B8F sing 145 n n C29 H40 B8F sing 146 n n C29 H41 B8F sing 147 n n C29 H42 B8F sing 148 n n C30 H43 B8F sing 149 n n C30 H44 B8F sing 150 n n C30 H45 B8F sing 151 n n O3 H46 B8F sing 152 n n # _atom_sites.entry_id 6J3N _atom_sites.fract_transf_matrix[1][1] 0.016147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006416 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 B8F A 1 600 600 B8F DRG . D 4 HOH A 1 701 1073 HOH HOH . D 4 HOH A 2 702 1013 HOH HOH . D 4 HOH A 3 703 1054 HOH HOH . D 4 HOH A 4 704 1016 HOH HOH . D 4 HOH A 5 705 1042 HOH HOH . D 4 HOH A 6 706 1072 HOH HOH . D 4 HOH A 7 707 1014 HOH HOH . D 4 HOH A 8 708 1015 HOH HOH . D 4 HOH A 9 709 1023 HOH HOH . D 4 HOH A 10 710 1069 HOH HOH . D 4 HOH A 11 711 1044 HOH HOH . D 4 HOH A 12 712 1052 HOH HOH . D 4 HOH A 13 713 1005 HOH HOH . D 4 HOH A 14 714 1045 HOH HOH . D 4 HOH A 15 715 1037 HOH HOH . D 4 HOH A 16 716 1082 HOH HOH . D 4 HOH A 17 717 1049 HOH HOH . D 4 HOH A 18 718 1024 HOH HOH . D 4 HOH A 19 719 1034 HOH HOH . D 4 HOH A 20 720 1021 HOH HOH . D 4 HOH A 21 721 1008 HOH HOH . D 4 HOH A 22 722 1009 HOH HOH . D 4 HOH A 23 723 1000 HOH HOH . D 4 HOH A 24 724 1003 HOH HOH . D 4 HOH A 25 725 1050 HOH HOH . D 4 HOH A 26 726 1083 HOH HOH . D 4 HOH A 27 727 1043 HOH HOH . D 4 HOH A 28 728 1039 HOH HOH . D 4 HOH A 29 729 1007 HOH HOH . D 4 HOH A 30 730 1006 HOH HOH . D 4 HOH A 31 731 1058 HOH HOH . D 4 HOH A 32 732 1027 HOH HOH . D 4 HOH A 33 733 1079 HOH HOH . D 4 HOH A 34 734 1029 HOH HOH . D 4 HOH A 35 735 1040 HOH HOH . D 4 HOH A 36 736 1001 HOH HOH . D 4 HOH A 37 737 1056 HOH HOH . D 4 HOH A 38 738 1025 HOH HOH . D 4 HOH A 39 739 1060 HOH HOH . D 4 HOH A 40 740 1057 HOH HOH . D 4 HOH A 41 741 1064 HOH HOH . D 4 HOH A 42 742 1030 HOH HOH . D 4 HOH A 43 743 1031 HOH HOH . D 4 HOH A 44 744 1017 HOH HOH . D 4 HOH A 45 745 1051 HOH HOH . D 4 HOH A 46 746 1055 HOH HOH . D 4 HOH A 47 747 1074 HOH HOH . D 4 HOH A 48 748 1012 HOH HOH . D 4 HOH A 49 749 1047 HOH HOH . D 4 HOH A 50 750 1004 HOH HOH . D 4 HOH A 51 751 1018 HOH HOH . D 4 HOH A 52 752 1020 HOH HOH . D 4 HOH A 53 753 1067 HOH HOH . D 4 HOH A 54 754 1053 HOH HOH . D 4 HOH A 55 755 1046 HOH HOH . D 4 HOH A 56 756 1022 HOH HOH . D 4 HOH A 57 757 1011 HOH HOH . D 4 HOH A 58 758 1038 HOH HOH . D 4 HOH A 59 759 1081 HOH HOH . D 4 HOH A 60 760 1033 HOH HOH . D 4 HOH A 61 761 1059 HOH HOH . D 4 HOH A 62 762 1026 HOH HOH . D 4 HOH A 63 763 1071 HOH HOH . D 4 HOH A 64 764 1035 HOH HOH . D 4 HOH A 65 765 1048 HOH HOH . D 4 HOH A 66 766 1070 HOH HOH . D 4 HOH A 67 767 1041 HOH HOH . D 4 HOH A 68 768 1036 HOH HOH . D 4 HOH A 69 769 1065 HOH HOH . D 4 HOH A 70 770 1066 HOH HOH . D 4 HOH A 71 771 1010 HOH HOH . D 4 HOH A 72 772 1002 HOH HOH . D 4 HOH A 73 773 1076 HOH HOH . D 4 HOH A 74 774 1061 HOH HOH . D 4 HOH A 75 775 1032 HOH HOH . D 4 HOH A 76 776 1062 HOH HOH . D 4 HOH A 77 777 1068 HOH HOH . D 4 HOH A 78 778 1028 HOH HOH . D 4 HOH A 79 779 1075 HOH HOH . D 4 HOH A 80 780 1077 HOH HOH . D 4 HOH A 81 781 1019 HOH HOH . E 4 HOH B 1 701 1063 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 B8F . . . C 3 24.653 -8.338 -16.705 1 88.66 ? C4 B8F 600 A 1 HETATM 2 C C14 B8F . . . C 3 26.229 -2.994 -14.012 1 94.69 ? C14 B8F 600 A 1 HETATM 3 C C5 B8F . . . C 3 24.19 -7.189 -15.798 1 88.74 ? C5 B8F 600 A 1 HETATM 4 C C6 B8F . . . C 3 25.163 -6.824 -14.654 1 88.46 ? C6 B8F 600 A 1 HETATM 5 C C11 B8F . . . C 3 23.763 -4.701 -14.126 1 88.4 ? C11 B8F 600 A 1 HETATM 6 C C7 B8F . . . C 3 25.141 -5.252 -14.526 1 89.66 ? C7 B8F 600 A 1 HETATM 7 C C8 B8F . . . C 3 26.261 -4.555 -13.698 1 90.98 ? C8 B8F 600 A 1 HETATM 8 C C9 B8F . . . C 3 27.619 -5.143 -14.121 1 85.93 ? C9 B8F 600 A 1 HETATM 9 C C10 B8F . . . C 3 27.647 -6.672 -14.119 1 81.74 ? C10 B8F 600 A 1 HETATM 10 C C12 B8F . . . C 3 23.752 -3.226 -13.868 1 88.33 ? C12 B8F 600 A 1 HETATM 11 C C13 B8F . . . C 3 24.808 -2.433 -13.811 1 92.37 ? C13 B8F 600 A 1 HETATM 12 C C3 B8F . . . C 3 25.561 -9.308 -16.031 1 87.08 ? C3 B8F 600 A 1 HETATM 13 C C1 B8F . . . C 3 26.602 -7.231 -15.081 1 83.97 ? C1 B8F 600 A 1 HETATM 14 C C15 B8F . . . C 3 24.608 -0.952 -13.475 1 95.84 ? C15 B8F 600 A 1 HETATM 15 C C16 B8F . . . C 3 25.621 -0.493 -12.404 1 100.71 ? C16 B8F 600 A 1 HETATM 16 C C17 B8F . . . C 3 27.035 -0.782 -12.925 1 96.78 ? C17 B8F 600 A 1 HETATM 17 C C18 B8F . . . C 3 27.252 -2.28 -13.095 1 96.42 ? C18 B8F 600 A 1 HETATM 18 C C19 B8F . . . C 3 24.611 -0.008 -14.72 1 93.78 ? C19 B8F 600 A 1 HETATM 19 C C2 B8F . . . C 3 26.841 -8.737 -15.436 1 84.15 ? C2 B8F 600 A 1 HETATM 20 C C20 B8F . . . C 3 24.456 1.471 -14.33 1 96.06 ? C20 B8F 600 A 1 HETATM 21 C C21 B8F . . . C 3 25.504 1.882 -13.315 1 96.46 ? C21 B8F 600 A 1 HETATM 22 C C22 B8F . . . C 3 25.437 1.005 -12.081 1 99.42 ? C22 B8F 600 A 1 HETATM 23 C C23 B8F . . . C 3 27.958 -8.882 -16.485 1 82.91 ? C23 B8F 600 A 1 HETATM 24 C C24 B8F . . . C 3 27.229 -9.609 -14.228 1 83.49 ? C24 B8F 600 A 1 HETATM 25 C C25 B8F . . . C 3 24.66 -7.546 -13.386 1 87.47 ? C25 B8F 600 A 1 HETATM 26 C C26 B8F . . . C 3 23.523 -0.42 -15.715 1 89.3 ? C26 B8F 600 A 1 HETATM 27 C C27 B8F . . . C 3 24.529 2.405 -15.548 1 95.94 ? C27 B8F 600 A 1 HETATM 28 C C28 B8F . . . C 3 25.487 -1.234 -11.064 1 106.03 ? C28 B8F 600 A 1 HETATM 29 C C29 B8F . . . C 3 26.109 -4.794 -12.175 1 90.86 ? C29 B8F 600 A 1 HETATM 30 C C30 B8F . . . C 3 26.64 -2.683 -15.476 1 95.92 ? C30 B8F 600 A 1 HETATM 31 O O1 B8F . . . C 3 25.287 -10.486 -15.961 1 87.59 ? O1 B8F 600 A 1 HETATM 32 O O2 B8F . . . C 3 24.697 -2.127 -10.919 1 106.29 ? O2 B8F 600 A 1 HETATM 33 O O3 B8F . . . C 3 26.174 -0.911 -10.133 1 107.82 -1 O3 B8F 600 A 1 # _model_server_stats.io_time_ms 62 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #