data_6J4V
#
_model_server_result.job_id            r_QNyQEo6bPs6Dc-VtopeA 
_model_server_result.datetime_utc      '2024-11-04 22:50:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6j4v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":306}' 
#
_entry.id    6J4V 
#
_exptl.entry_id    6J4V 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6J4V 
_cell.length_a            82.281 
_cell.length_b            122.413 
_cell.length_c            194.269 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6J4V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        22 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'F 2 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 G N N 
? 5 H N N 
? 5 I N N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            A 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             113 
_struct_conn.ptnr1_auth_asym_id             A 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              158 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            C 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             20 
_struct_conn.ptnr2_auth_asym_id             C 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              450 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.072 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6J4V 
_atom_sites.fract_transf_matrix[1][1]    0.012153 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008169 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005148 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 PO4 A 1 301 1 PO4 PO4 . 
E 4 PO4 A 1 302 2 PO4 PO4 . 
F 5 GOL A 1 303 1 GOL GOL . 
G 5 GOL A 1 304 2 GOL GOL . 
H 5 GOL A 1 305 3 GOL GOL . 
I 5 GOL A 1 306 4 GOL GOL . 
J 6 HOH A 1 401 193 HOH HOH . 
J 6 HOH A 2 402 260 HOH HOH . 
J 6 HOH A 3 403 69 HOH HOH . 
J 6 HOH A 4 404 173 HOH HOH . 
J 6 HOH A 5 405 22 HOH HOH . 
J 6 HOH A 6 406 116 HOH HOH . 
J 6 HOH A 7 407 84 HOH HOH . 
J 6 HOH A 8 408 3 HOH HOH . 
J 6 HOH A 9 409 87 HOH HOH . 
J 6 HOH A 10 410 239 HOH HOH . 
J 6 HOH A 11 411 81 HOH HOH . 
J 6 HOH A 12 412 64 HOH HOH . 
J 6 HOH A 13 413 26 HOH HOH . 
J 6 HOH A 14 414 105 HOH HOH . 
J 6 HOH A 15 415 93 HOH HOH . 
J 6 HOH A 16 416 150 HOH HOH . 
J 6 HOH A 17 417 236 HOH HOH . 
J 6 HOH A 18 418 136 HOH HOH . 
J 6 HOH A 19 419 255 HOH HOH . 
J 6 HOH A 20 420 59 HOH HOH . 
J 6 HOH A 21 421 11 HOH HOH . 
J 6 HOH A 22 422 96 HOH HOH . 
J 6 HOH A 23 423 1 HOH HOH . 
J 6 HOH A 24 424 24 HOH HOH . 
J 6 HOH A 25 425 47 HOH HOH . 
J 6 HOH A 26 426 57 HOH HOH . 
J 6 HOH A 27 427 240 HOH HOH . 
J 6 HOH A 28 428 121 HOH HOH . 
J 6 HOH A 29 429 114 HOH HOH . 
J 6 HOH A 30 430 46 HOH HOH . 
J 6 HOH A 31 431 95 HOH HOH . 
J 6 HOH A 32 432 252 HOH HOH . 
J 6 HOH A 33 433 152 HOH HOH . 
J 6 HOH A 34 434 25 HOH HOH . 
J 6 HOH A 35 435 6 HOH HOH . 
J 6 HOH A 36 436 42 HOH HOH . 
J 6 HOH A 37 437 169 HOH HOH . 
J 6 HOH A 38 438 54 HOH HOH . 
J 6 HOH A 39 439 15 HOH HOH . 
J 6 HOH A 40 440 52 HOH HOH . 
J 6 HOH A 41 441 16 HOH HOH . 
J 6 HOH A 42 442 186 HOH HOH . 
J 6 HOH A 43 443 7 HOH HOH . 
J 6 HOH A 44 444 10 HOH HOH . 
J 6 HOH A 45 445 34 HOH HOH . 
J 6 HOH A 46 446 51 HOH HOH . 
J 6 HOH A 47 447 89 HOH HOH . 
J 6 HOH A 48 448 75 HOH HOH . 
J 6 HOH A 49 449 56 HOH HOH . 
J 6 HOH A 50 450 225 HOH HOH . 
J 6 HOH A 51 451 30 HOH HOH . 
J 6 HOH A 52 452 4 HOH HOH . 
J 6 HOH A 53 453 12 HOH HOH . 
J 6 HOH A 54 454 36 HOH HOH . 
J 6 HOH A 55 455 110 HOH HOH . 
J 6 HOH A 56 456 80 HOH HOH . 
J 6 HOH A 57 457 40 HOH HOH . 
J 6 HOH A 58 458 9 HOH HOH . 
J 6 HOH A 59 459 60 HOH HOH . 
J 6 HOH A 60 460 258 HOH HOH . 
J 6 HOH A 61 461 38 HOH HOH . 
J 6 HOH A 62 462 154 HOH HOH . 
J 6 HOH A 63 463 157 HOH HOH . 
J 6 HOH A 64 464 78 HOH HOH . 
J 6 HOH A 65 465 14 HOH HOH . 
J 6 HOH A 66 466 112 HOH HOH . 
J 6 HOH A 67 467 19 HOH HOH . 
J 6 HOH A 68 468 77 HOH HOH . 
J 6 HOH A 69 469 20 HOH HOH . 
J 6 HOH A 70 470 55 HOH HOH . 
J 6 HOH A 71 471 27 HOH HOH . 
J 6 HOH A 72 472 134 HOH HOH . 
J 6 HOH A 73 473 5 HOH HOH . 
J 6 HOH A 74 474 68 HOH HOH . 
J 6 HOH A 75 475 2 HOH HOH . 
J 6 HOH A 76 476 250 HOH HOH . 
J 6 HOH A 77 477 41 HOH HOH . 
J 6 HOH A 78 478 117 HOH HOH . 
J 6 HOH A 79 479 33 HOH HOH . 
J 6 HOH A 80 480 179 HOH HOH . 
J 6 HOH A 81 481 49 HOH HOH . 
J 6 HOH A 82 482 17 HOH HOH . 
J 6 HOH A 83 483 220 HOH HOH . 
J 6 HOH A 84 484 130 HOH HOH . 
J 6 HOH A 85 485 13 HOH HOH . 
J 6 HOH A 86 486 67 HOH HOH . 
J 6 HOH A 87 487 178 HOH HOH . 
J 6 HOH A 88 488 62 HOH HOH . 
J 6 HOH A 89 489 83 HOH HOH . 
J 6 HOH A 90 490 256 HOH HOH . 
J 6 HOH A 91 491 72 HOH HOH . 
J 6 HOH A 92 492 45 HOH HOH . 
J 6 HOH A 93 493 23 HOH HOH . 
J 6 HOH A 94 494 207 HOH HOH . 
J 6 HOH A 95 495 251 HOH HOH . 
J 6 HOH A 96 496 138 HOH HOH . 
J 6 HOH A 97 497 107 HOH HOH . 
J 6 HOH A 98 498 139 HOH HOH . 
J 6 HOH A 99 499 43 HOH HOH . 
J 6 HOH A 100 500 111 HOH HOH . 
J 6 HOH A 101 501 214 HOH HOH . 
J 6 HOH A 102 502 76 HOH HOH . 
J 6 HOH A 103 503 8 HOH HOH . 
J 6 HOH A 104 504 243 HOH HOH . 
J 6 HOH A 105 505 183 HOH HOH . 
J 6 HOH A 106 506 106 HOH HOH . 
J 6 HOH A 107 507 65 HOH HOH . 
J 6 HOH A 108 508 248 HOH HOH . 
J 6 HOH A 109 509 48 HOH HOH . 
J 6 HOH A 110 510 115 HOH HOH . 
J 6 HOH A 111 511 151 HOH HOH . 
J 6 HOH A 112 512 142 HOH HOH . 
J 6 HOH A 113 513 91 HOH HOH . 
J 6 HOH A 114 514 108 HOH HOH . 
J 6 HOH A 115 515 50 HOH HOH . 
J 6 HOH A 116 516 175 HOH HOH . 
J 6 HOH A 117 517 253 HOH HOH . 
J 6 HOH A 118 518 263 HOH HOH . 
J 6 HOH A 119 519 137 HOH HOH . 
J 6 HOH A 120 520 145 HOH HOH . 
J 6 HOH A 121 521 97 HOH HOH . 
J 6 HOH A 122 522 208 HOH HOH . 
J 6 HOH A 123 523 203 HOH HOH . 
J 6 HOH A 124 524 63 HOH HOH . 
J 6 HOH A 125 525 128 HOH HOH . 
J 6 HOH A 126 526 133 HOH HOH . 
J 6 HOH A 127 527 123 HOH HOH . 
J 6 HOH A 128 528 127 HOH HOH . 
J 6 HOH A 129 529 146 HOH HOH . 
J 6 HOH A 130 530 94 HOH HOH . 
J 6 HOH A 131 531 39 HOH HOH . 
J 6 HOH A 132 532 101 HOH HOH . 
J 6 HOH A 133 533 197 HOH HOH . 
J 6 HOH A 134 534 29 HOH HOH . 
J 6 HOH A 135 535 257 HOH HOH . 
J 6 HOH A 136 536 18 HOH HOH . 
J 6 HOH A 137 537 104 HOH HOH . 
J 6 HOH A 138 538 143 HOH HOH . 
J 6 HOH A 139 539 232 HOH HOH . 
J 6 HOH A 140 540 102 HOH HOH . 
J 6 HOH A 141 541 79 HOH HOH . 
J 6 HOH A 142 542 159 HOH HOH . 
J 6 HOH A 143 543 195 HOH HOH . 
J 6 HOH A 144 544 118 HOH HOH . 
J 6 HOH A 145 545 58 HOH HOH . 
J 6 HOH A 146 546 163 HOH HOH . 
J 6 HOH A 147 547 204 HOH HOH . 
J 6 HOH A 148 548 229 HOH HOH . 
J 6 HOH A 149 549 44 HOH HOH . 
J 6 HOH A 150 550 244 HOH HOH . 
J 6 HOH A 151 551 70 HOH HOH . 
J 6 HOH A 152 552 148 HOH HOH . 
J 6 HOH A 153 553 261 HOH HOH . 
J 6 HOH A 154 554 140 HOH HOH . 
J 6 HOH A 155 555 155 HOH HOH . 
J 6 HOH A 156 556 73 HOH HOH . 
J 6 HOH A 157 557 131 HOH HOH . 
J 6 HOH A 158 558 189 HOH HOH . 
J 6 HOH A 159 559 160 HOH HOH . 
J 6 HOH A 160 560 90 HOH HOH . 
J 6 HOH A 161 561 158 HOH HOH . 
J 6 HOH A 162 562 100 HOH HOH . 
J 6 HOH A 163 563 237 HOH HOH . 
J 6 HOH A 164 564 126 HOH HOH . 
J 6 HOH A 165 565 37 HOH HOH . 
J 6 HOH A 166 566 74 HOH HOH . 
J 6 HOH A 167 567 129 HOH HOH . 
J 6 HOH A 168 568 153 HOH HOH . 
J 6 HOH A 169 569 180 HOH HOH . 
J 6 HOH A 170 570 209 HOH HOH . 
J 6 HOH A 171 571 231 HOH HOH . 
J 6 HOH A 172 572 185 HOH HOH . 
J 6 HOH A 173 573 245 HOH HOH . 
J 6 HOH A 174 574 174 HOH HOH . 
J 6 HOH A 175 575 246 HOH HOH . 
J 6 HOH A 176 576 188 HOH HOH . 
J 6 HOH A 177 577 227 HOH HOH . 
J 6 HOH A 178 578 215 HOH HOH . 
J 6 HOH A 179 579 182 HOH HOH . 
J 6 HOH A 180 580 32 HOH HOH . 
J 6 HOH A 181 581 192 HOH HOH . 
J 6 HOH A 182 582 200 HOH HOH . 
J 6 HOH A 183 583 86 HOH HOH . 
J 6 HOH A 184 584 168 HOH HOH . 
J 6 HOH A 185 585 221 HOH HOH . 
J 6 HOH A 186 586 262 HOH HOH . 
J 6 HOH A 187 587 201 HOH HOH . 
J 6 HOH A 188 588 92 HOH HOH . 
J 6 HOH A 189 589 164 HOH HOH . 
J 6 HOH A 190 590 190 HOH HOH . 
J 6 HOH A 191 591 217 HOH HOH . 
J 6 HOH A 192 592 234 HOH HOH . 
J 6 HOH A 193 593 259 HOH HOH . 
J 6 HOH A 194 594 35 HOH HOH . 
J 6 HOH A 195 595 242 HOH HOH . 
J 6 HOH A 196 596 247 HOH HOH . 
J 6 HOH A 197 597 224 HOH HOH . 
J 6 HOH A 198 598 196 HOH HOH . 
J 6 HOH A 199 599 213 HOH HOH . 
J 6 HOH A 200 600 226 HOH HOH . 
J 6 HOH A 201 601 98 HOH HOH . 
J 6 HOH A 202 602 113 HOH HOH . 
J 6 HOH A 203 603 205 HOH HOH . 
J 6 HOH A 204 604 249 HOH HOH . 
J 6 HOH A 205 605 210 HOH HOH . 
J 6 HOH A 206 606 144 HOH HOH . 
J 6 HOH A 207 607 124 HOH HOH . 
J 6 HOH A 208 608 28 HOH HOH . 
J 6 HOH A 209 609 88 HOH HOH . 
J 6 HOH A 210 610 85 HOH HOH . 
J 6 HOH A 211 611 119 HOH HOH . 
J 6 HOH A 212 612 187 HOH HOH . 
J 6 HOH A 213 613 149 HOH HOH . 
J 6 HOH A 214 614 206 HOH HOH . 
J 6 HOH A 215 615 212 HOH HOH . 
J 6 HOH A 216 616 135 HOH HOH . 
J 6 HOH A 217 617 156 HOH HOH . 
J 6 HOH A 218 618 171 HOH HOH . 
J 6 HOH A 219 619 109 HOH HOH . 
J 6 HOH A 220 620 120 HOH HOH . 
J 6 HOH A 221 621 199 HOH HOH . 
J 6 HOH A 222 622 161 HOH HOH . 
J 6 HOH A 223 623 165 HOH HOH . 
J 6 HOH A 224 624 166 HOH HOH . 
J 6 HOH A 225 625 167 HOH HOH . 
J 6 HOH A 226 626 222 HOH HOH . 
K 6 HOH B 1 101 228 HOH HOH . 
K 6 HOH B 2 102 181 HOH HOH . 
K 6 HOH B 3 103 53 HOH HOH . 
K 6 HOH B 4 104 147 HOH HOH . 
K 6 HOH B 5 105 254 HOH HOH . 
K 6 HOH B 6 106 184 HOH HOH . 
K 6 HOH B 7 107 238 HOH HOH . 
K 6 HOH B 8 108 141 HOH HOH . 
K 6 HOH B 9 109 31 HOH HOH . 
K 6 HOH B 10 110 82 HOH HOH . 
K 6 HOH B 11 111 71 HOH HOH . 
K 6 HOH B 12 112 66 HOH HOH . 
K 6 HOH B 13 113 103 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . I 5 41.979 37.129 61.331 1 69.94 ? C1 GOL 306 A 1 
HETATM 2 O O1 GOL . . . I 5 42.187 37.141 59.942 1 65.76 ? O1 GOL 306 A 1 
HETATM 3 C C2 GOL . . . I 5 42.239 38.572 61.844 1 68.85 ? C2 GOL 306 A 1 
HETATM 4 O O2 GOL . . . I 5 41.105 39.15 62.417 1 71.86 ? O2 GOL 306 A 1 
HETATM 5 C C3 GOL . . . I 5 43.391 38.42 62.859 1 63.78 ? C3 GOL 306 A 1 
HETATM 6 O O3 GOL . . . I 5 44.436 37.81 62.176 1 62.36 ? O3 GOL 306 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#