data_6J63 # _model_server_result.job_id Vsam9NbgLpHaCCR2FhPFIg _model_server_result.datetime_utc '2024-11-26 15:42:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j63 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 6J63 # _exptl.entry_id 6J63 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 55.845 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 92.15 _cell.angle_gamma 90 _cell.entry_id 6J63 _cell.length_a 95.66 _cell.length_b 95.96 _cell.length_c 97.93 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J63 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,G,H,M,N 1 1 C,D,I,J,K,L,O,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 G N N ? 2 I N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 401 A CYS 401 1_555 A SG CYS 416 A CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 B SG CYS 401 B CYS 401 1_555 B SG CYS 416 B CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf3 C SG CYS 401 C CYS 401 1_555 C SG CYS 416 C CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf4 D SG CYS 401 D CYS 401 1_555 D SG CYS 416 D CYS 416 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 A NE2 HIS 226 A HIS 226 1_555 E FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc2 A NE2 HIS 308 A HIS 308 1_555 E FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.212 ? metalc ? metalc3 A OE1 GLU 394 A GLU 394 1_555 E FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc4 E FE FE . A FE 501 1_555 F O1 NTD . A NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc5 E FE FE . A FE 501 1_555 F O7 NTD . A NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? metalc ? metalc6 B NE2 HIS 226 B HIS 226 1_555 G FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc7 B NE2 HIS 308 B HIS 308 1_555 G FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc8 B OE1 GLU 394 B GLU 394 1_555 G FE FE . B FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc9 G FE FE . B FE 501 1_555 H O1 NTD . B NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.879 ? metalc ? metalc10 G FE FE . B FE 501 1_555 H O7 NTD . B NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.938 ? metalc ? metalc11 C NE2 HIS 226 C HIS 226 1_555 I FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? metalc ? metalc12 C NE2 HIS 308 C HIS 308 1_555 I FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.384 ? metalc ? metalc13 C OE1 GLU 394 C GLU 394 1_555 I FE FE . C FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc14 I FE FE . C FE 501 1_555 J O7 NTD . C NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc15 I FE FE . C FE 501 1_555 J O1 NTD . C NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc16 D NE2 HIS 226 D HIS 226 1_555 K FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc17 D NE2 HIS 308 D HIS 308 1_555 K FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc18 D OE2 GLU 394 D GLU 394 1_555 K FE FE . D FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc19 K FE FE . D FE 501 1_555 L O1 NTD . D NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? metalc ? metalc20 K FE FE . D FE 501 1_555 L O7 NTD . D NTD 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.978 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6J63 _atom_sites.fract_transf_matrix[1][1] 0.010454 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000392 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010421 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 FE A 1 501 501 FE FE . F 3 NTD A 1 502 502 NTD NTD . G 2 FE B 1 501 501 FE FE . H 3 NTD B 1 502 502 NTD NTD . I 2 FE C 1 501 501 FE FE . J 3 NTD C 1 502 502 NTD NTD . K 2 FE D 1 501 501 FE FE . L 3 NTD D 1 502 502 NTD NTD . M 4 HOH A 1 601 602 HOH HOH . M 4 HOH A 2 602 601 HOH HOH . M 4 HOH A 3 603 603 HOH HOH . M 4 HOH A 4 604 604 HOH HOH . N 4 HOH B 1 601 602 HOH HOH . N 4 HOH B 2 602 603 HOH HOH . N 4 HOH B 3 603 601 HOH HOH . N 4 HOH B 4 604 604 HOH HOH . N 4 HOH B 5 605 605 HOH HOH . O 4 HOH C 1 601 601 HOH HOH . O 4 HOH C 2 602 604 HOH HOH . O 4 HOH C 3 603 603 HOH HOH . O 4 HOH C 4 604 602 HOH HOH . O 4 HOH C 5 605 605 HOH HOH . P 4 HOH D 1 601 601 HOH HOH . P 4 HOH D 2 602 602 HOH HOH . P 4 HOH D 3 603 603 HOH HOH . P 4 HOH D 4 604 604 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 2 _atom_site.Cartn_x 33.275 _atom_site.Cartn_y -19.839 _atom_site.Cartn_z 5.061 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.61 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 501 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 1 #