data_6J7C # _model_server_result.job_id GKLLr5O8M0zPZrMwJbVjQQ _model_server_result.datetime_utc '2024-11-09 02:40:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j7c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 6J7C # _exptl.entry_id 6J7C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 115.13 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PROLINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6J7C _cell.length_a 125.379 _cell.length_b 125.379 _cell.length_c 140.633 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J7C _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_556 y,x,-z+1 -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 140.633 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O2' _chem_comp.formula_weight 115.13 _chem_comp.id PRO _chem_comp.mon_nstd_flag y _chem_comp.name PROLINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PRO sing 260 n n N CD PRO sing 261 n n N H PRO sing 262 n n CA C PRO sing 263 n n CA CB PRO sing 264 n n CA HA PRO sing 265 n n C O PRO doub 266 n n C OXT PRO sing 267 n n CB CG PRO sing 268 n n CB HB2 PRO sing 269 n n CB HB3 PRO sing 270 n n CG CD PRO sing 271 n n CG HG2 PRO sing 272 n n CG HG3 PRO sing 273 n n CD HD2 PRO sing 274 n n CD HD3 PRO sing 275 n n OXT HXT PRO sing 276 n n # _atom_sites.entry_id 6J7C _atom_sites.fract_transf_matrix[1][1] 0.007976 _atom_sites.fract_transf_matrix[1][2] 0.004605 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00921 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007111 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PRO A 1 401 1 PRO PRO . C 3 HOH A 1 501 8 HOH HOH . C 3 HOH A 2 502 16 HOH HOH . C 3 HOH A 3 503 15 HOH HOH . C 3 HOH A 4 504 24 HOH HOH . C 3 HOH A 5 505 13 HOH HOH . C 3 HOH A 6 506 3 HOH HOH . C 3 HOH A 7 507 25 HOH HOH . C 3 HOH A 8 508 7 HOH HOH . C 3 HOH A 9 509 14 HOH HOH . C 3 HOH A 10 510 22 HOH HOH . C 3 HOH A 11 511 6 HOH HOH . C 3 HOH A 12 512 23 HOH HOH . C 3 HOH A 13 513 9 HOH HOH . C 3 HOH A 14 514 18 HOH HOH . C 3 HOH A 15 515 21 HOH HOH . C 3 HOH A 16 516 1 HOH HOH . C 3 HOH A 17 517 11 HOH HOH . C 3 HOH A 18 518 19 HOH HOH . C 3 HOH A 19 519 10 HOH HOH . C 3 HOH A 20 520 5 HOH HOH . C 3 HOH A 21 521 17 HOH HOH . C 3 HOH A 22 522 4 HOH HOH . C 3 HOH A 23 523 2 HOH HOH . C 3 HOH A 24 524 20 HOH HOH . C 3 HOH A 25 525 27 HOH HOH . C 3 HOH A 26 526 12 HOH HOH . C 3 HOH A 27 527 26 HOH HOH . C 3 HOH A 28 528 28 HOH HOH . C 3 HOH A 29 529 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PRO . . . B 2 41.069 52.171 57.722 1 62.48 ? N PRO 401 A 1 HETATM 2 C CA PRO . . . B 2 40.932 51.161 56.677 1 60.89 ? CA PRO 401 A 1 HETATM 3 C C PRO . . . B 2 42.157 50.261 56.445 1 56.42 ? C PRO 401 A 1 HETATM 4 O O PRO . . . B 2 42.703 50.207 55.347 1 57.95 ? O PRO 401 A 1 HETATM 5 C CB PRO . . . B 2 40.627 52.002 55.437 1 57.05 ? CB PRO 401 A 1 HETATM 6 C CG PRO . . . B 2 39.79 53.143 56.009 1 60.66 ? CG PRO 401 A 1 HETATM 7 C CD PRO . . . B 2 40.112 53.261 57.503 1 59.58 ? CD PRO 401 A 1 HETATM 8 O OXT PRO . . . B 2 42.582 49.539 57.359 1 55.69 ? OXT PRO 401 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #