data_6J7I
#
_model_server_result.job_id            XLngfrwyjEAJmKJ6FcptNw 
_model_server_result.datetime_utc      '2025-03-04 13:09:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6j7i 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":901}' 
#
_entry.id    6J7I 
#
_exptl.entry_id    6J7I 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6J7I 
_cell.length_a            82.771 
_cell.length_b            158.101 
_cell.length_c            188.515 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6J7I 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E 1 1 
B,F,G,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 45 A HIS 25 1_555 C FE HEM . A HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
metalc ? metalc2 B NE2 HIS 45 B HIS 25 1_555 F FE HEM . B HEM 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.98 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 274 n n 
CHA C4D HEM doub 275 n n 
CHA HHA HEM sing 276 n n 
CHB C4A HEM sing 277 n n 
CHB C1B HEM doub 278 n n 
CHB HHB HEM sing 279 n n 
CHC C4B HEM sing 280 n n 
CHC C1C HEM doub 281 n n 
CHC HHC HEM sing 282 n n 
CHD C4C HEM doub 283 n n 
CHD C1D HEM sing 284 n n 
CHD HHD HEM sing 285 n n 
C1A C2A HEM doub 286 n y 
C1A NA HEM sing 287 n y 
C2A C3A HEM sing 288 n y 
C2A CAA HEM sing 289 n n 
C3A C4A HEM doub 290 n y 
C3A CMA HEM sing 291 n n 
C4A NA HEM sing 292 n y 
CMA HMA HEM sing 293 n n 
CMA HMAA HEM sing 294 n n 
CMA HMAB HEM sing 295 n n 
CAA CBA HEM sing 296 n n 
CAA HAA HEM sing 297 n n 
CAA HAAA HEM sing 298 n n 
CBA CGA HEM sing 299 n n 
CBA HBA HEM sing 300 n n 
CBA HBAA HEM sing 301 n n 
CGA O1A HEM doub 302 n n 
CGA O2A HEM sing 303 n n 
C1B C2B HEM sing 304 n n 
C1B NB HEM sing 305 n n 
C2B C3B HEM doub 306 n n 
C2B CMB HEM sing 307 n n 
C3B C4B HEM sing 308 n n 
C3B CAB HEM sing 309 n n 
C4B NB HEM doub 310 n n 
CMB HMB HEM sing 311 n n 
CMB HMBA HEM sing 312 n n 
CMB HMBB HEM sing 313 n n 
CAB CBB HEM doub 314 n n 
CAB HAB HEM sing 315 n n 
CBB HBB HEM sing 316 n n 
CBB HBBA HEM sing 317 n n 
C1C C2C HEM sing 318 n y 
C1C NC HEM sing 319 n y 
C2C C3C HEM doub 320 n y 
C2C CMC HEM sing 321 n n 
C3C C4C HEM sing 322 n y 
C3C CAC HEM sing 323 n n 
C4C NC HEM sing 324 n y 
CMC HMC HEM sing 325 n n 
CMC HMCA HEM sing 326 n n 
CMC HMCB HEM sing 327 n n 
CAC CBC HEM doub 328 n n 
CAC HAC HEM sing 329 n n 
CBC HBC HEM sing 330 n n 
CBC HBCA HEM sing 331 n n 
C1D C2D HEM sing 332 n n 
C1D ND HEM doub 333 n n 
C2D C3D HEM doub 334 n n 
C2D CMD HEM sing 335 n n 
C3D C4D HEM sing 336 n n 
C3D CAD HEM sing 337 n n 
C4D ND HEM sing 338 n n 
CMD HMD HEM sing 339 n n 
CMD HMDA HEM sing 340 n n 
CMD HMDB HEM sing 341 n n 
CAD CBD HEM sing 342 n n 
CAD HAD HEM sing 343 n n 
CAD HADA HEM sing 344 n n 
CBD CGD HEM sing 345 n n 
CBD HBD HEM sing 346 n n 
CBD HBDA HEM sing 347 n n 
CGD O1D HEM doub 348 n n 
CGD O2D HEM sing 349 n n 
O2A H2A HEM sing 350 n n 
O2D H2D HEM sing 351 n n 
FE NA HEM sing 352 n n 
FE NB HEM sing 353 n n 
FE NC HEM sing 354 n n 
FE ND HEM sing 355 n n 
#
_atom_sites.entry_id                     6J7I 
_atom_sites.fract_transf_matrix[1][1]    0.012082 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006325 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005305 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 901 902 HEM HEM . 
D 3 FAD A 1 902 929 FAD FAD . 
E 4 FMN A 1 903 930 FMN FMN . 
F 2 HEM B 1 901 902 HEM HEM . 
G 3 FAD B 1 902 929 FAD FAD . 
H 4 FMN B 1 903 930 FMN FMN . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 2 -29.572 6.934 -40.744 1 22.06 ? CHA HEM 901 A 1 
HETATM 2 C CHB HEM . . . C 2 -27.672 10.055 -43.917 1 34.2 ? CHB HEM 901 A 1 
HETATM 3 C CHC HEM . . . C 2 -30.569 13.571 -42.164 1 18.57 ? CHC HEM 901 A 1 
HETATM 4 C CHD HEM . . . C 2 -31.922 10.598 -38.609 1 11.07 ? CHD HEM 901 A 1 
HETATM 5 C C1A HEM . . . C 2 -28.844 7.522 -41.742 1 32.17 ? C1A HEM 901 A 1 
HETATM 6 C C2A HEM . . . C 2 -27.883 6.814 -42.49 1 29.21 ? C2A HEM 901 A 1 
HETATM 7 C C3A HEM . . . C 2 -27.353 7.685 -43.378 1 22.75 ? C3A HEM 901 A 1 
HETATM 8 C C4A HEM . . . C 2 -27.97 8.934 -43.18 1 29.97 ? C4A HEM 901 A 1 
HETATM 9 C CMA HEM . . . C 2 -26.284 7.38 -44.39 1 24.4 ? CMA HEM 901 A 1 
HETATM 10 C CAA HEM . . . C 2 -27.529 5.353 -42.348 1 45.33 ? CAA HEM 901 A 1 
HETATM 11 C CBA HEM . . . C 2 -26.594 5.035 -41.18 1 66.16 ? CBA HEM 901 A 1 
HETATM 12 C CGA HEM . . . C 2 -26.847 3.605 -40.753 1 79.63 ? CGA HEM 901 A 1 
HETATM 13 O O1A HEM . . . C 2 -27.709 2.913 -41.345 1 83.25 ? O1A HEM 901 A 1 
HETATM 14 O O2A HEM . . . C 2 -26.199 3.1 -39.807 1 81.19 ? O2A HEM 901 A 1 
HETATM 15 C C1B HEM . . . C 2 -28.308 11.272 -43.67 1 29.87 ? C1B HEM 901 A 1 
HETATM 16 C C2B HEM . . . C 2 -28.01 12.44 -44.423 1 19.77 ? C2B HEM 901 A 1 
HETATM 17 C C3B HEM . . . C 2 -28.81 13.432 -43.952 1 27.07 ? C3B HEM 901 A 1 
HETATM 18 C C4B HEM . . . C 2 -29.619 12.829 -42.872 1 23.23 ? C4B HEM 901 A 1 
HETATM 19 C CMB HEM . . . C 2 -26.996 12.57 -45.53 1 8.95 ? CMB HEM 901 A 1 
HETATM 20 C CAB HEM . . . C 2 -28.852 14.831 -44.414 1 30.08 ? CAB HEM 901 A 1 
HETATM 21 C CBB HEM . . . C 2 -27.886 15.68 -44.075 1 33.86 ? CBB HEM 901 A 1 
HETATM 22 C C1C HEM . . . C 2 -31.164 13.118 -40.997 1 18.68 ? C1C HEM 901 A 1 
HETATM 23 C C2C HEM . . . C 2 -31.925 13.873 -40.092 1 14.48 ? C2C HEM 901 A 1 
HETATM 24 C C3C HEM . . . C 2 -32.304 13.01 -39.065 1 22.51 ? C3C HEM 901 A 1 
HETATM 25 C C4C HEM . . . C 2 -31.768 11.729 -39.373 1 19.94 ? C4C HEM 901 A 1 
HETATM 26 C CMC HEM . . . C 2 -32.231 15.343 -40.257 1 14.14 ? CMC HEM 901 A 1 
HETATM 27 C CAC HEM . . . C 2 -33.117 13.277 -37.861 1 35.36 ? CAC HEM 901 A 1 
HETATM 28 C CBC HEM . . . C 2 -33.181 14.467 -37.276 1 41.72 ? CBC HEM 901 A 1 
HETATM 29 C C1D HEM . . . C 2 -31.337 9.376 -38.937 1 7.07 ? C1D HEM 901 A 1 
HETATM 30 C C2D HEM . . . C 2 -31.529 8.209 -38.075 1 14.45 ? C2D HEM 901 A 1 
HETATM 31 C C3D HEM . . . C 2 -30.881 7.185 -38.656 1 17.01 ? C3D HEM 901 A 1 
HETATM 32 C C4D HEM . . . C 2 -30.304 7.73 -39.888 1 18.83 ? C4D HEM 901 A 1 
HETATM 33 C CMD HEM . . . C 2 -32.302 8.175 -36.784 1 15.76 ? CMD HEM 901 A 1 
HETATM 34 C CAD HEM . . . C 2 -30.781 5.773 -38.136 1 24.29 ? CAD HEM 901 A 1 
HETATM 35 C CBD HEM . . . C 2 -31.759 4.829 -38.839 1 25.01 ? CBD HEM 901 A 1 
HETATM 36 C CGD HEM . . . C 2 -31.587 3.435 -38.281 1 30.37 ? CGD HEM 901 A 1 
HETATM 37 O O1D HEM . . . C 2 -32.491 2.916 -37.587 1 25.19 ? O1D HEM 901 A 1 
HETATM 38 O O2D HEM . . . C 2 -30.532 2.798 -38.492 1 36.51 ? O2D HEM 901 A 1 
HETATM 39 N NA HEM . . . C 2 -28.9 8.839 -42.168 1 30.7 ? NA HEM 901 A 1 
HETATM 40 N NB HEM . . . C 2 -29.245 11.541 -42.754 1 23.44 ? NB HEM 901 A 1 
HETATM 41 N NC HEM . . . C 2 -31.097 11.839 -40.549 1 22.56 ? NC HEM 901 A 1 
HETATM 42 N ND HEM . . . C 2 -30.576 9.044 -39.995 1 20.14 ? ND HEM 901 A 1 
HETATM 43 FE FE HEM . . . C 2 -30.139 10.213 -41.394 1 18.6 ? FE HEM 901 A 1 
#
_model_server_stats.io_time_ms              35 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    39 
_model_server_stats.query_time_ms           453 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           43 
#