data_6J86 # _model_server_result.job_id jN1sNe5z1NBMlsI4C4dyyQ _model_server_result.datetime_utc '2024-10-15 13:21:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j86 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6J86 # _exptl.entry_id 6J86 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 351.442 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(2S)-1-hydroxy-3-(1H-indol-3-yl)propan-2-yl]-Nalpha-methyl-L-phenylalaninamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.96 _cell.angle_gamma 90 _cell.entry_id 6J86 _cell.length_a 49.32 _cell.length_b 152.578 _cell.length_c 56.336 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J86 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 367 A CYS 347 1_555 C FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.427 ? metalc ? metalc2 C FE HEM . A HEM 501 1_555 G O HOH . A HOH 618 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.451 ? metalc ? metalc3 B SG CYS 367 B CYS 347 1_555 E FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc4 E FE HEM . B HEM 501 1_555 F OAP B9L . B B9L 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? # _chem_comp.formula 'C21 H25 N3 O2' _chem_comp.formula_weight 351.442 _chem_comp.id B9L _chem_comp.mon_nstd_flag . _chem_comp.name N-[(2S)-1-hydroxy-3-(1H-indol-3-yl)propan-2-yl]-Nalpha-methyl-L-phenylalaninamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CD1 CE1 B9L doub 70 n y CD1 CG B9L sing 71 n y CE1 CZ B9L sing 72 n y CB CG B9L sing 73 n n CB CA B9L sing 74 n n CG CD2 B9L doub 75 n y CZ CE2 B9L doub 76 n y CD2 CE2 B9L sing 77 n y CAI N B9L sing 78 n n CA N B9L sing 79 n n CA C B9L sing 80 n n C O B9L doub 81 n n C NAX B9L sing 82 n n NAX CAN B9L sing 83 n n CAD CAC B9L sing 84 n y CAD CAE B9L doub 85 n y NAJ CAE B9L sing 86 n y NAJ CAK B9L sing 87 n y CAC CAB B9L doub 88 n y CAE CAF B9L sing 89 n y CAO CAN B9L sing 90 n n CAO OAP B9L sing 91 n n CAK CAL B9L doub 92 n y CAN CAM B9L sing 93 n n CAB CAG B9L sing 94 n y CAF CAL B9L sing 95 n y CAF CAG B9L doub 96 n y CAL CAM B9L sing 97 n n N H1 B9L sing 98 n n CA H3 B9L sing 99 n n CB H4 B9L sing 100 n n CB H5 B9L sing 101 n n CD1 H6 B9L sing 102 n n CD2 H7 B9L sing 103 n n CE1 H8 B9L sing 104 n n CE2 H9 B9L sing 105 n n CZ H10 B9L sing 106 n n CAB H11 B9L sing 107 n n CAC H12 B9L sing 108 n n CAD H13 B9L sing 109 n n CAG H14 B9L sing 110 n n CAI H15 B9L sing 111 n n CAI H16 B9L sing 112 n n CAI H17 B9L sing 113 n n CAK H18 B9L sing 114 n n CAM H19 B9L sing 115 n n CAM H20 B9L sing 116 n n CAN H21 B9L sing 117 n n CAO H22 B9L sing 118 n n CAO H23 B9L sing 119 n n NAJ H24 B9L sing 120 n n NAX H25 B9L sing 121 n n OAP H26 B9L sing 122 n n # _atom_sites.entry_id 6J86 _atom_sites.fract_transf_matrix[1][1] 0.020276 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009871 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006554 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 401 HEM HEM . D 3 B9L A 1 502 2 B9L DRG . E 2 HEM B 1 501 401 HEM HEM . F 3 B9L B 1 502 1 B9L DRG . G 4 HOH A 1 601 67 HOH HOH . G 4 HOH A 2 602 81 HOH HOH . G 4 HOH A 3 603 63 HOH HOH . G 4 HOH A 4 604 25 HOH HOH . G 4 HOH A 5 605 122 HOH HOH . G 4 HOH A 6 606 61 HOH HOH . G 4 HOH A 7 607 30 HOH HOH . G 4 HOH A 8 608 94 HOH HOH . G 4 HOH A 9 609 32 HOH HOH . G 4 HOH A 10 610 21 HOH HOH . G 4 HOH A 11 611 62 HOH HOH . G 4 HOH A 12 612 85 HOH HOH . G 4 HOH A 13 613 100 HOH HOH . G 4 HOH A 14 614 15 HOH HOH . G 4 HOH A 15 615 82 HOH HOH . G 4 HOH A 16 616 7 HOH HOH . G 4 HOH A 17 617 40 HOH HOH . G 4 HOH A 18 618 127 HOH HOH . G 4 HOH A 19 619 87 HOH HOH . G 4 HOH A 20 620 34 HOH HOH . G 4 HOH A 21 621 39 HOH HOH . G 4 HOH A 22 622 38 HOH HOH . G 4 HOH A 23 623 112 HOH HOH . G 4 HOH A 24 624 70 HOH HOH . G 4 HOH A 25 625 44 HOH HOH . G 4 HOH A 26 626 60 HOH HOH . G 4 HOH A 27 627 37 HOH HOH . G 4 HOH A 28 628 93 HOH HOH . G 4 HOH A 29 629 46 HOH HOH . G 4 HOH A 30 630 111 HOH HOH . G 4 HOH A 31 631 51 HOH HOH . G 4 HOH A 32 632 35 HOH HOH . G 4 HOH A 33 633 75 HOH HOH . G 4 HOH A 34 634 53 HOH HOH . G 4 HOH A 35 635 84 HOH HOH . G 4 HOH A 36 636 28 HOH HOH . G 4 HOH A 37 637 47 HOH HOH . G 4 HOH A 38 638 77 HOH HOH . G 4 HOH A 39 639 74 HOH HOH . G 4 HOH A 40 640 92 HOH HOH . G 4 HOH A 41 641 64 HOH HOH . G 4 HOH A 42 642 8 HOH HOH . G 4 HOH A 43 643 79 HOH HOH . G 4 HOH A 44 644 90 HOH HOH . G 4 HOH A 45 645 11 HOH HOH . G 4 HOH A 46 646 107 HOH HOH . G 4 HOH A 47 647 68 HOH HOH . G 4 HOH A 48 648 50 HOH HOH . H 4 HOH B 1 601 17 HOH HOH . H 4 HOH B 2 602 14 HOH HOH . H 4 HOH B 3 603 41 HOH HOH . H 4 HOH B 4 604 26 HOH HOH . H 4 HOH B 5 605 118 HOH HOH . H 4 HOH B 6 606 66 HOH HOH . H 4 HOH B 7 607 88 HOH HOH . H 4 HOH B 8 608 116 HOH HOH . H 4 HOH B 9 609 18 HOH HOH . H 4 HOH B 10 610 125 HOH HOH . H 4 HOH B 11 611 55 HOH HOH . H 4 HOH B 12 612 23 HOH HOH . H 4 HOH B 13 613 86 HOH HOH . H 4 HOH B 14 614 119 HOH HOH . H 4 HOH B 15 615 115 HOH HOH . H 4 HOH B 16 616 48 HOH HOH . H 4 HOH B 17 617 24 HOH HOH . H 4 HOH B 18 618 96 HOH HOH . H 4 HOH B 19 619 71 HOH HOH . H 4 HOH B 20 620 80 HOH HOH . H 4 HOH B 21 621 117 HOH HOH . H 4 HOH B 22 622 49 HOH HOH . H 4 HOH B 23 623 91 HOH HOH . H 4 HOH B 24 624 31 HOH HOH . H 4 HOH B 25 625 9 HOH HOH . H 4 HOH B 26 626 120 HOH HOH . H 4 HOH B 27 627 57 HOH HOH . H 4 HOH B 28 628 16 HOH HOH . H 4 HOH B 29 629 27 HOH HOH . H 4 HOH B 30 630 45 HOH HOH . H 4 HOH B 31 631 33 HOH HOH . H 4 HOH B 32 632 76 HOH HOH . H 4 HOH B 33 633 89 HOH HOH . H 4 HOH B 34 634 114 HOH HOH . H 4 HOH B 35 635 13 HOH HOH . H 4 HOH B 36 636 128 HOH HOH . H 4 HOH B 37 637 95 HOH HOH . H 4 HOH B 38 638 108 HOH HOH . H 4 HOH B 39 639 110 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N B9L . . . D 3 -6.305 -7.518 18.152 1 28.55 ? N B9L 502 A 1 HETATM 2 C CA B9L . . . D 3 -6.575 -8.672 17.271 1 30.58 ? CA B9L 502 A 1 HETATM 3 C C B9L . . . D 3 -5.555 -9.832 17.482 1 35.41 ? C B9L 502 A 1 HETATM 4 O O B9L . . . D 3 -5.608 -10.804 16.721 1 38.8 ? O B9L 502 A 1 HETATM 5 C CB B9L . . . D 3 -6.573 -8.265 15.786 1 23.75 ? CB B9L 502 A 1 HETATM 6 C CG B9L . . . D 3 -5.272 -8.044 15.355 1 24.86 ? CG B9L 502 A 1 HETATM 7 C CD1 B9L . . . D 3 -4.678 -6.81 15.598 1 24.67 ? CD1 B9L 502 A 1 HETATM 8 C CD2 B9L . . . D 3 -4.575 -9.044 14.67 1 24.36 ? CD2 B9L 502 A 1 HETATM 9 C CE1 B9L . . . D 3 -3.373 -6.579 15.167 1 26.15 ? CE1 B9L 502 A 1 HETATM 10 C CE2 B9L . . . D 3 -3.275 -8.809 14.246 1 30.48 ? CE2 B9L 502 A 1 HETATM 11 C CZ B9L . . . D 3 -2.673 -7.574 14.494 1 24.59 ? CZ B9L 502 A 1 HETATM 12 C CAB B9L . . . D 3 0.287 -7.195 20.393 1 31.54 ? CAB B9L 502 A 1 HETATM 13 C CAC B9L . . . D 3 0.798 -6.442 19.339 1 29.4 ? CAC B9L 502 A 1 HETATM 14 C CAD B9L . . . D 3 0.468 -6.813 18.039 1 26.58 ? CAD B9L 502 A 1 HETATM 15 C CAE B9L . . . D 3 -0.304 -7.877 17.806 1 33.46 ? CAE B9L 502 A 1 HETATM 16 C CAF B9L . . . D 3 -0.778 -8.607 18.821 1 33.36 ? CAF B9L 502 A 1 HETATM 17 C CAG B9L . . . D 3 -0.508 -8.299 20.095 1 30.89 ? CAG B9L 502 A 1 HETATM 18 C CAI B9L . . . D 3 -7.531 -6.744 18.412 1 24.79 ? CAI B9L 502 A 1 HETATM 19 C CAK B9L . . . D 3 -1.479 -9.51 16.953 1 32.54 ? CAK B9L 502 A 1 HETATM 20 C CAL B9L . . . D 3 -1.496 -9.586 18.279 1 31.44 ? CAL B9L 502 A 1 HETATM 21 C CAM B9L . . . D 3 -2.225 -10.622 19.098 1 29.05 ? CAM B9L 502 A 1 HETATM 22 C CAN B9L . . . D 3 -3.669 -10.879 18.612 1 30.72 ? CAN B9L 502 A 1 HETATM 23 C CAO B9L . . . D 3 -4.337 -11.773 19.648 1 33.32 ? CAO B9L 502 A 1 HETATM 24 N NAJ B9L . . . D 3 -0.736 -8.438 16.663 1 34.43 ? NAJ B9L 502 A 1 HETATM 25 N NAX B9L . . . D 3 -4.589 -9.726 18.44 1 32.95 ? NAX B9L 502 A 1 HETATM 26 O OAP B9L . . . D 3 -4.633 -11.01 20.826 1 34.67 ? OAP B9L 502 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #