data_6J87 # _model_server_result.job_id JsDAVt1d_FVESJqJ73B3nw _model_server_result.datetime_utc '2024-11-15 11:50:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6j87 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":502}' # _entry.id 6J87 # _exptl.entry_id 6J87 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 30.006 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NITRIC OXIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.54 _cell.angle_gamma 90 _cell.entry_id 6J87 _cell.length_a 49.212 _cell.length_b 155.029 _cell.length_c 56.556 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6J87 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 C FE HEM . A HEM 501 1_555 D N NO . A NO 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.918 ? metalc ? metalc2 F FE HEM . B HEM 501 1_555 G N NO . B NO 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.828 ? # _chem_comp.formula 'N O' _chem_comp.formula_weight 30.006 _chem_comp.id NO _chem_comp.mon_nstd_flag . _chem_comp.name 'NITRIC OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Nitrogen monoxide' # _chem_comp_bond.atom_id_1 N _chem_comp_bond.atom_id_2 O _chem_comp_bond.comp_id NO _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 348 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 6J87 _atom_sites.fract_transf_matrix[1][1] 0.02032 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009708 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00645 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019596 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 501 401 HEM HEM . D 3 NO A 1 502 501 NO NO . E 4 B9L A 1 503 2 B9L DRG . F 2 HEM B 1 501 401 HEM HEM . G 3 NO B 1 502 501 NO NO . H 4 B9L B 1 503 1 B9L DRG . I 5 HOH A 1 601 9 HOH HOH . I 5 HOH A 2 602 272 HOH HOH . I 5 HOH A 3 603 22 HOH HOH . I 5 HOH A 4 604 244 HOH HOH . I 5 HOH A 5 605 98 HOH HOH . I 5 HOH A 6 606 125 HOH HOH . I 5 HOH A 7 607 25 HOH HOH . I 5 HOH A 8 608 91 HOH HOH . I 5 HOH A 9 609 14 HOH HOH . I 5 HOH A 10 610 63 HOH HOH . I 5 HOH A 11 611 57 HOH HOH . I 5 HOH A 12 612 49 HOH HOH . I 5 HOH A 13 613 229 HOH HOH . I 5 HOH A 14 614 33 HOH HOH . I 5 HOH A 15 615 223 HOH HOH . I 5 HOH A 16 616 8 HOH HOH . I 5 HOH A 17 617 184 HOH HOH . I 5 HOH A 18 618 88 HOH HOH . I 5 HOH A 19 619 266 HOH HOH . I 5 HOH A 20 620 107 HOH HOH . I 5 HOH A 21 621 220 HOH HOH . I 5 HOH A 22 622 249 HOH HOH . I 5 HOH A 23 623 16 HOH HOH . I 5 HOH A 24 624 213 HOH HOH . I 5 HOH A 25 625 106 HOH HOH . I 5 HOH A 26 626 40 HOH HOH . I 5 HOH A 27 627 84 HOH HOH . I 5 HOH A 28 628 285 HOH HOH . I 5 HOH A 29 629 58 HOH HOH . I 5 HOH A 30 630 26 HOH HOH . I 5 HOH A 31 631 147 HOH HOH . I 5 HOH A 32 632 259 HOH HOH . I 5 HOH A 33 633 110 HOH HOH . I 5 HOH A 34 634 124 HOH HOH . I 5 HOH A 35 635 150 HOH HOH . I 5 HOH A 36 636 219 HOH HOH . I 5 HOH A 37 637 138 HOH HOH . I 5 HOH A 38 638 43 HOH HOH . I 5 HOH A 39 639 161 HOH HOH . I 5 HOH A 40 640 23 HOH HOH . I 5 HOH A 41 641 13 HOH HOH . I 5 HOH A 42 642 163 HOH HOH . I 5 HOH A 43 643 241 HOH HOH . I 5 HOH A 44 644 251 HOH HOH . I 5 HOH A 45 645 299 HOH HOH . I 5 HOH A 46 646 61 HOH HOH . I 5 HOH A 47 647 222 HOH HOH . I 5 HOH A 48 648 74 HOH HOH . I 5 HOH A 49 649 112 HOH HOH . I 5 HOH A 50 650 189 HOH HOH . I 5 HOH A 51 651 134 HOH HOH . I 5 HOH A 52 652 180 HOH HOH . I 5 HOH A 53 653 93 HOH HOH . I 5 HOH A 54 654 172 HOH HOH . I 5 HOH A 55 655 109 HOH HOH . I 5 HOH A 56 656 149 HOH HOH . I 5 HOH A 57 657 277 HOH HOH . I 5 HOH A 58 658 292 HOH HOH . I 5 HOH A 59 659 46 HOH HOH . I 5 HOH A 60 660 76 HOH HOH . I 5 HOH A 61 661 153 HOH HOH . I 5 HOH A 62 662 146 HOH HOH . I 5 HOH A 63 663 105 HOH HOH . I 5 HOH A 64 664 92 HOH HOH . I 5 HOH A 65 665 85 HOH HOH . I 5 HOH A 66 666 115 HOH HOH . I 5 HOH A 67 667 35 HOH HOH . I 5 HOH A 68 668 81 HOH HOH . I 5 HOH A 69 669 280 HOH HOH . I 5 HOH A 70 670 169 HOH HOH . I 5 HOH A 71 671 256 HOH HOH . I 5 HOH A 72 672 53 HOH HOH . I 5 HOH A 73 673 242 HOH HOH . I 5 HOH A 74 674 253 HOH HOH . I 5 HOH A 75 675 154 HOH HOH . I 5 HOH A 76 676 89 HOH HOH . I 5 HOH A 77 677 181 HOH HOH . I 5 HOH A 78 678 186 HOH HOH . I 5 HOH A 79 679 159 HOH HOH . I 5 HOH A 80 680 62 HOH HOH . I 5 HOH A 81 681 268 HOH HOH . I 5 HOH A 82 682 67 HOH HOH . I 5 HOH A 83 683 296 HOH HOH . I 5 HOH A 84 684 193 HOH HOH . I 5 HOH A 85 685 59 HOH HOH . I 5 HOH A 86 686 167 HOH HOH . I 5 HOH A 87 687 77 HOH HOH . I 5 HOH A 88 688 73 HOH HOH . I 5 HOH A 89 689 113 HOH HOH . I 5 HOH A 90 690 104 HOH HOH . I 5 HOH A 91 691 231 HOH HOH . I 5 HOH A 92 692 70 HOH HOH . I 5 HOH A 93 693 83 HOH HOH . I 5 HOH A 94 694 122 HOH HOH . I 5 HOH A 95 695 287 HOH HOH . I 5 HOH A 96 696 101 HOH HOH . I 5 HOH A 97 697 234 HOH HOH . I 5 HOH A 98 698 302 HOH HOH . I 5 HOH A 99 699 152 HOH HOH . I 5 HOH A 100 700 173 HOH HOH . I 5 HOH A 101 701 243 HOH HOH . I 5 HOH A 102 702 39 HOH HOH . I 5 HOH A 103 703 168 HOH HOH . I 5 HOH A 104 704 108 HOH HOH . I 5 HOH A 105 705 300 HOH HOH . I 5 HOH A 106 706 192 HOH HOH . I 5 HOH A 107 707 264 HOH HOH . I 5 HOH A 108 708 64 HOH HOH . I 5 HOH A 109 709 288 HOH HOH . I 5 HOH A 110 710 258 HOH HOH . I 5 HOH A 111 711 34 HOH HOH . I 5 HOH A 112 712 265 HOH HOH . I 5 HOH A 113 713 262 HOH HOH . I 5 HOH A 114 714 278 HOH HOH . I 5 HOH A 115 715 247 HOH HOH . I 5 HOH A 116 716 208 HOH HOH . I 5 HOH A 117 717 275 HOH HOH . I 5 HOH A 118 718 212 HOH HOH . I 5 HOH A 119 719 188 HOH HOH . I 5 HOH A 120 720 133 HOH HOH . I 5 HOH A 121 721 145 HOH HOH . I 5 HOH A 122 722 260 HOH HOH . I 5 HOH A 123 723 216 HOH HOH . I 5 HOH A 124 724 191 HOH HOH . I 5 HOH A 125 725 301 HOH HOH . I 5 HOH A 126 726 281 HOH HOH . I 5 HOH A 127 727 100 HOH HOH . I 5 HOH A 128 728 225 HOH HOH . I 5 HOH A 129 729 267 HOH HOH . I 5 HOH A 130 730 254 HOH HOH . I 5 HOH A 131 731 157 HOH HOH . J 5 HOH B 1 601 15 HOH HOH . J 5 HOH B 2 602 289 HOH HOH . J 5 HOH B 3 603 38 HOH HOH . J 5 HOH B 4 604 65 HOH HOH . J 5 HOH B 5 605 18 HOH HOH . J 5 HOH B 6 606 142 HOH HOH . J 5 HOH B 7 607 185 HOH HOH . J 5 HOH B 8 608 156 HOH HOH . J 5 HOH B 9 609 72 HOH HOH . J 5 HOH B 10 610 158 HOH HOH . J 5 HOH B 11 611 68 HOH HOH . J 5 HOH B 12 612 69 HOH HOH . J 5 HOH B 13 613 129 HOH HOH . J 5 HOH B 14 614 27 HOH HOH . J 5 HOH B 15 615 282 HOH HOH . J 5 HOH B 16 616 103 HOH HOH . J 5 HOH B 17 617 246 HOH HOH . J 5 HOH B 18 618 294 HOH HOH . J 5 HOH B 19 619 238 HOH HOH . J 5 HOH B 20 620 271 HOH HOH . J 5 HOH B 21 621 17 HOH HOH . J 5 HOH B 22 622 140 HOH HOH . J 5 HOH B 23 623 114 HOH HOH . J 5 HOH B 24 624 144 HOH HOH . J 5 HOH B 25 625 37 HOH HOH . J 5 HOH B 26 626 52 HOH HOH . J 5 HOH B 27 627 12 HOH HOH . J 5 HOH B 28 628 261 HOH HOH . J 5 HOH B 29 629 44 HOH HOH . J 5 HOH B 30 630 86 HOH HOH . J 5 HOH B 31 631 143 HOH HOH . J 5 HOH B 32 632 179 HOH HOH . J 5 HOH B 33 633 227 HOH HOH . J 5 HOH B 34 634 283 HOH HOH . J 5 HOH B 35 635 55 HOH HOH . J 5 HOH B 36 636 274 HOH HOH . J 5 HOH B 37 637 54 HOH HOH . J 5 HOH B 38 638 94 HOH HOH . J 5 HOH B 39 639 237 HOH HOH . J 5 HOH B 40 640 166 HOH HOH . J 5 HOH B 41 641 75 HOH HOH . J 5 HOH B 42 642 47 HOH HOH . J 5 HOH B 43 643 165 HOH HOH . J 5 HOH B 44 644 164 HOH HOH . J 5 HOH B 45 645 60 HOH HOH . J 5 HOH B 46 646 90 HOH HOH . J 5 HOH B 47 647 28 HOH HOH . J 5 HOH B 48 648 276 HOH HOH . J 5 HOH B 49 649 176 HOH HOH . J 5 HOH B 50 650 131 HOH HOH . J 5 HOH B 51 651 252 HOH HOH . J 5 HOH B 52 652 119 HOH HOH . J 5 HOH B 53 653 290 HOH HOH . J 5 HOH B 54 654 291 HOH HOH . J 5 HOH B 55 655 79 HOH HOH . J 5 HOH B 56 656 118 HOH HOH . J 5 HOH B 57 657 170 HOH HOH . J 5 HOH B 58 658 207 HOH HOH . J 5 HOH B 59 659 111 HOH HOH . J 5 HOH B 60 660 19 HOH HOH . J 5 HOH B 61 661 226 HOH HOH . J 5 HOH B 62 662 95 HOH HOH . J 5 HOH B 63 663 141 HOH HOH . J 5 HOH B 64 664 233 HOH HOH . J 5 HOH B 65 665 82 HOH HOH . J 5 HOH B 66 666 297 HOH HOH . J 5 HOH B 67 667 97 HOH HOH . J 5 HOH B 68 668 11 HOH HOH . J 5 HOH B 69 669 151 HOH HOH . J 5 HOH B 70 670 121 HOH HOH . J 5 HOH B 71 671 135 HOH HOH . J 5 HOH B 72 672 178 HOH HOH . J 5 HOH B 73 673 232 HOH HOH . J 5 HOH B 74 674 136 HOH HOH . J 5 HOH B 75 675 257 HOH HOH . J 5 HOH B 76 676 162 HOH HOH . J 5 HOH B 77 677 120 HOH HOH . J 5 HOH B 78 678 5 HOH HOH . J 5 HOH B 79 679 78 HOH HOH . J 5 HOH B 80 680 215 HOH HOH . J 5 HOH B 81 681 148 HOH HOH . J 5 HOH B 82 682 183 HOH HOH . J 5 HOH B 83 683 182 HOH HOH . J 5 HOH B 84 684 221 HOH HOH . J 5 HOH B 85 685 279 HOH HOH . J 5 HOH B 86 686 20 HOH HOH . J 5 HOH B 87 687 270 HOH HOH . J 5 HOH B 88 688 248 HOH HOH . J 5 HOH B 89 689 293 HOH HOH . J 5 HOH B 90 690 102 HOH HOH . J 5 HOH B 91 691 295 HOH HOH . J 5 HOH B 92 692 87 HOH HOH . J 5 HOH B 93 693 269 HOH HOH . J 5 HOH B 94 694 175 HOH HOH . J 5 HOH B 95 695 99 HOH HOH . J 5 HOH B 96 696 245 HOH HOH . J 5 HOH B 97 697 24 HOH HOH . J 5 HOH B 98 698 117 HOH HOH . J 5 HOH B 99 699 255 HOH HOH . J 5 HOH B 100 700 210 HOH HOH . J 5 HOH B 101 701 56 HOH HOH . J 5 HOH B 102 702 211 HOH HOH . J 5 HOH B 103 703 160 HOH HOH . J 5 HOH B 104 704 32 HOH HOH . J 5 HOH B 105 705 217 HOH HOH . J 5 HOH B 106 706 127 HOH HOH . J 5 HOH B 107 707 236 HOH HOH . J 5 HOH B 108 708 209 HOH HOH . J 5 HOH B 109 709 116 HOH HOH . J 5 HOH B 110 710 240 HOH HOH . J 5 HOH B 111 711 51 HOH HOH . J 5 HOH B 112 712 177 HOH HOH . J 5 HOH B 113 713 298 HOH HOH . J 5 HOH B 114 714 200 HOH HOH . J 5 HOH B 115 715 286 HOH HOH . J 5 HOH B 116 716 130 HOH HOH . J 5 HOH B 117 717 263 HOH HOH . J 5 HOH B 118 718 284 HOH HOH . J 5 HOH B 119 719 196 HOH HOH . J 5 HOH B 120 720 230 HOH HOH . J 5 HOH B 121 721 187 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N NO . . . G 3 22.966 -21.516 -3.642 1 18.42 ? N NO 502 B 1 HETATM 2 O O NO . . . G 3 23.127 -22.943 -3.524 1 29.6 ? O NO 502 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 2 #