data_6JAE
#
_model_server_result.job_id            wFj6MWYp4cSasYeWfevSKQ 
_model_server_result.datetime_utc      '2024-11-14 05:27:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jae 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":701}' 
#
_entry.id    6JAE 
#
_exptl.entry_id    6JAE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.06 
_cell.angle_gamma         90 
_cell.entry_id            6JAE 
_cell.length_a            62.309 
_cell.length_b            122.229 
_cell.length_c            155.958 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JAE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L 1 1 
C,D,H,I,J,M,N 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 G N N 
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6JAE 
_atom_sites.fract_transf_matrix[1][1]    0.016049 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.000016 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008181 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006412 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PO4 A 1 601 601 PO4 PO4 . 
F 3 GOL A 1 602 701 GOL GOL . 
G 3 GOL B 1 701 701 GOL GOL . 
H 2 PO4 C 1 601 601 PO4 PO4 . 
I 3 GOL C 1 602 701 GOL GOL . 
J 3 GOL D 1 701 701 GOL GOL . 
K 4 HOH A 1 701 10 HOH HOH . 
K 4 HOH A 2 702 45 HOH HOH . 
K 4 HOH A 3 703 19 HOH HOH . 
K 4 HOH A 4 704 34 HOH HOH . 
K 4 HOH A 5 705 35 HOH HOH . 
K 4 HOH A 6 706 28 HOH HOH . 
K 4 HOH A 7 707 16 HOH HOH . 
K 4 HOH A 8 708 46 HOH HOH . 
K 4 HOH A 9 709 20 HOH HOH . 
K 4 HOH A 10 710 42 HOH HOH . 
K 4 HOH A 11 711 15 HOH HOH . 
L 4 HOH B 1 801 44 HOH HOH . 
L 4 HOH B 2 802 40 HOH HOH . 
L 4 HOH B 3 803 39 HOH HOH . 
L 4 HOH B 4 804 29 HOH HOH . 
L 4 HOH B 5 805 2 HOH HOH . 
L 4 HOH B 6 806 27 HOH HOH . 
L 4 HOH B 7 807 3 HOH HOH . 
L 4 HOH B 8 808 6 HOH HOH . 
L 4 HOH B 9 809 22 HOH HOH . 
L 4 HOH B 10 810 31 HOH HOH . 
L 4 HOH B 11 811 23 HOH HOH . 
L 4 HOH B 12 812 47 HOH HOH . 
L 4 HOH B 13 813 43 HOH HOH . 
M 4 HOH C 1 701 26 HOH HOH . 
M 4 HOH C 2 702 25 HOH HOH . 
M 4 HOH C 3 703 18 HOH HOH . 
M 4 HOH C 4 704 37 HOH HOH . 
M 4 HOH C 5 705 38 HOH HOH . 
M 4 HOH C 6 706 32 HOH HOH . 
M 4 HOH C 7 707 33 HOH HOH . 
M 4 HOH C 8 708 14 HOH HOH . 
M 4 HOH C 9 709 21 HOH HOH . 
M 4 HOH C 10 710 41 HOH HOH . 
M 4 HOH C 11 711 12 HOH HOH . 
M 4 HOH C 12 712 24 HOH HOH . 
M 4 HOH C 13 713 48 HOH HOH . 
N 4 HOH D 1 801 17 HOH HOH . 
N 4 HOH D 2 802 13 HOH HOH . 
N 4 HOH D 3 803 11 HOH HOH . 
N 4 HOH D 4 804 7 HOH HOH . 
N 4 HOH D 5 805 1 HOH HOH . 
N 4 HOH D 6 806 5 HOH HOH . 
N 4 HOH D 7 807 9 HOH HOH . 
N 4 HOH D 8 808 4 HOH HOH . 
N 4 HOH D 9 809 30 HOH HOH . 
N 4 HOH D 10 810 36 HOH HOH . 
N 4 HOH D 11 811 8 HOH HOH . 
N 4 HOH D 12 812 49 HOH HOH . 
N 4 HOH D 13 813 51 HOH HOH . 
N 4 HOH D 14 814 50 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 3 33.383 0.217 54.845 1 72.7 ? C1 GOL 701 B 1 
HETATM 2 O O1 GOL . . . G 3 32.631 -1.022 54.709 1 66.87 ? O1 GOL 701 B 1 
HETATM 3 C C2 GOL . . . G 3 33.978 0.451 56.247 1 67.06 ? C2 GOL 701 B 1 
HETATM 4 O O2 GOL . . . G 3 32.995 0.559 57.276 1 57.26 ? O2 GOL 701 B 1 
HETATM 5 C C3 GOL . . . G 3 34.652 1.795 56.298 1 76.19 ? C3 GOL 701 B 1 
HETATM 6 O O3 GOL . . . G 3 34.528 2.387 57.613 1 79.51 ? O3 GOL 701 B 1 
#
_model_server_stats.io_time_ms              17 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    42 
_model_server_stats.query_time_ms           316 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           6 
#