data_6JB1
#
_model_server_result.job_id            GXTL9lyaiDk6LBljcNNmuw 
_model_server_result.datetime_utc      '2024-11-04 22:39:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jb1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"DA","auth_seq_id":1603}' 
#
_entry.id    6JB1 
#
_exptl.entry_id    6JB1 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              452.586 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            Repaglinide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JB1 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JB1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 M N N 
? 6 DA N N 
? 6 UA N N 
? 6 LB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf4 D SG CYS 6 D CYS 6 1_555 D SG CYS 26 D CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 E SG CYS 110 E CYS 110 1_555 E SG CYS 142 E CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf6 F SG CYS 6 F CYS 6 1_555 F SG CYS 26 F CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf7 G SG CYS 110 G CYS 110 1_555 G SG CYS 142 G CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf8 H SG CYS 6 H CYS 6 1_555 H SG CYS 26 H CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C27 H36 N2 O4' 
_chem_comp.formula_weight    452.586 
_chem_comp.id                BJX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              Repaglinide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '2-ethoxy-4-[2-({(1S)-3-methyl-1-[2-(piperidin-1-yl)phenyl]butyl}amino)-2-oxoethyl]benzoic acid' 
#
_atom_sites.entry_id                     6JB1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 POV A 1 401 4006 POV POV . 
J 4 AGS A 1 402 401 AGS AGS . 
K 5 AJP B 1 1601 2002 AJP AJP . 
L 4 AGS B 1 1602 2501 AGS AGS . 
M 6 BJX B 1 1603 3001 BJX RPG . 
N 3 POV B 1 1604 4001 POV POV . 
O 3 POV B 1 1605 4002 POV POV . 
P 3 POV B 1 1606 4003 POV POV . 
Q 3 POV B 1 1607 4004 POV POV . 
R 3 POV B 1 1608 4005 POV POV . 
S 3 POV B 1 1609 4007 POV POV . 
T 3 POV B 1 1610 4008 POV POV . 
U 3 POV B 1 1611 4009 POV POV . 
V 7 PTY B 1 1612 4011 PTY PTY . 
W 7 PTY B 1 1613 4012 PTY PTY . 
X 7 PTY B 1 1614 4013 PTY PTY . 
Y 7 PTY B 1 1615 4014 PTY PTY . 
Z 4 AGS C 1 401 401 AGS AGS . 
AA 3 POV C 1 402 4006 POV POV . 
BA 5 AJP D 1 1601 2002 AJP AJP . 
CA 4 AGS D 1 1602 2501 AGS AGS . 
DA 6 BJX D 1 1603 3001 BJX RPG . 
EA 3 POV D 1 1604 4001 POV POV . 
FA 3 POV D 1 1605 4002 POV POV . 
GA 3 POV D 1 1606 4003 POV POV . 
HA 3 POV D 1 1607 4004 POV POV . 
IA 3 POV D 1 1608 4005 POV POV . 
JA 3 POV D 1 1609 4007 POV POV . 
KA 3 POV D 1 1610 4008 POV POV . 
LA 3 POV D 1 1611 4009 POV POV . 
MA 7 PTY D 1 1612 4011 PTY PTY . 
NA 7 PTY D 1 1613 4012 PTY PTY . 
OA 7 PTY D 1 1614 4013 PTY PTY . 
PA 7 PTY D 1 1615 4014 PTY PTY . 
QA 4 AGS E 1 401 401 AGS AGS . 
RA 3 POV E 1 402 4006 POV POV . 
SA 5 AJP F 1 1601 2002 AJP AJP . 
TA 4 AGS F 1 1602 2501 AGS AGS . 
UA 6 BJX F 1 1603 3001 BJX RPG . 
VA 3 POV F 1 1604 4001 POV POV . 
WA 3 POV F 1 1605 4002 POV POV . 
XA 3 POV F 1 1606 4003 POV POV . 
YA 3 POV F 1 1607 4004 POV POV . 
ZA 3 POV F 1 1608 4005 POV POV . 
AB 3 POV F 1 1609 4007 POV POV . 
BB 3 POV F 1 1610 4008 POV POV . 
CB 3 POV F 1 1611 4009 POV POV . 
DB 7 PTY F 1 1612 4011 PTY PTY . 
EB 7 PTY F 1 1613 4012 PTY PTY . 
FB 7 PTY F 1 1614 4013 PTY PTY . 
GB 7 PTY F 1 1615 4014 PTY PTY . 
HB 4 AGS G 1 401 401 AGS AGS . 
IB 3 POV G 1 402 4006 POV POV . 
JB 5 AJP H 1 1601 2002 AJP AJP . 
KB 4 AGS H 1 1602 2501 AGS AGS . 
LB 6 BJX H 1 1603 3001 BJX RPG . 
MB 3 POV H 1 1604 4001 POV POV . 
NB 3 POV H 1 1605 4002 POV POV . 
OB 3 POV H 1 1606 4003 POV POV . 
PB 3 POV H 1 1607 4004 POV POV . 
QB 3 POV H 1 1608 4005 POV POV . 
RB 3 POV H 1 1609 4007 POV POV . 
SB 3 POV H 1 1610 4008 POV POV . 
TB 3 POV H 1 1611 4009 POV POV . 
UB 7 PTY H 1 1612 4011 PTY PTY . 
VB 7 PTY H 1 1613 4012 PTY PTY . 
WB 7 PTY H 1 1614 4013 PTY PTY . 
XB 7 PTY H 1 1615 4014 PTY PTY . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C9 BJX . . . DA 6 103.936 182.258 160.918 1 176.76 ? C9 BJX 1603 D 1 
HETATM 2 C C10 BJX . . . DA 6 99.828 182.804 165.023 1 198.34 ? C10 BJX 1603 D 1 
HETATM 3 C C11 BJX . . . DA 6 100.896 184.624 163.162 1 185.14 ? C11 BJX 1603 D 1 
HETATM 4 C C12 BJX . . . DA 6 103.441 183.444 160.097 1 177.32 ? C12 BJX 1603 D 1 
HETATM 5 C C13 BJX . . . DA 6 103.866 180.967 160.11 1 177.27 ? C13 BJX 1603 D 1 
HETATM 6 C C14 BJX . . . DA 6 99.093 183.903 164.595 1 193.46 ? C14 BJX 1603 D 1 
HETATM 7 C C15 BJX . . . DA 6 99.62 184.801 163.676 1 187.58 ? C15 BJX 1603 D 1 
HETATM 8 C C16 BJX . . . DA 6 104.862 184.528 164.009 1 181.84 ? C16 BJX 1603 D 1 
HETATM 9 C C17 BJX . . . DA 6 105.731 184.718 165.226 1 175.3 ? C17 BJX 1603 D 1 
HETATM 10 C C18 BJX . . . DA 6 106.078 183.408 165.89 1 174.2 ? C18 BJX 1603 D 1 
HETATM 11 C C19 BJX . . . DA 6 106.485 182.321 165.131 1 174.21 ? C19 BJX 1603 D 1 
HETATM 12 C C20 BJX . . . DA 6 106.005 183.319 167.276 1 183.1 ? C20 BJX 1603 D 1 
HETATM 13 C C8 BJX . . . DA 6 103.15 182.106 162.212 1 182.2 ? C8 BJX 1603 D 1 
HETATM 14 C C7 BJX . . . DA 6 101.668 183.543 163.557 1 185.83 ? C7 BJX 1603 D 1 
HETATM 15 C C6 BJX . . . DA 6 101.109 182.577 164.545 1 191.61 ? C6 BJX 1603 D 1 
HETATM 16 C C5 BJX . . . DA 6 103.016 183.419 162.968 1 182.32 ? C5 BJX 1603 D 1 
HETATM 17 C C4 BJX . . . DA 6 103.108 179.099 166.084 1 197.1 ? C4 BJX 1603 D 1 
HETATM 18 C C3 BJX . . . DA 6 102.7 180.306 166.917 1 194.59 ? C3 BJX 1603 D 1 
HETATM 19 C C2 BJX . . . DA 6 102.74 179.303 164.621 1 194.71 ? C2 BJX 1603 D 1 
HETATM 20 C C1 BJX . . . DA 6 102.766 181.589 166.097 1 186.69 ? C1 BJX 1603 D 1 
HETATM 21 O O1 BJX . . . DA 6 107.202 180.028 165.059 1 187.08 ? O1 BJX 1603 D 1 
HETATM 22 O O2 BJX . . . DA 6 108.118 179.05 167.479 1 186.72 ? O2 BJX 1603 D 1 
HETATM 23 N N BJX . . . DA 6 101.788 181.447 165.023 1 195.22 ? N BJX 1603 D 1 
HETATM 24 C C BJX . . . DA 6 101.474 180.137 164.469 1 202.7 ? C BJX 1603 D 1 
HETATM 25 O O BJX . . . DA 6 104.935 185.306 163.079 1 186.47 ? O BJX 1603 D 1 
HETATM 26 C C21 BJX . . . DA 6 106.8 181.13 165.761 1 178.34 ? C21 BJX 1603 D 1 
HETATM 27 C C22 BJX . . . DA 6 106.32 182.149 167.955 1 174.82 ? C22 BJX 1603 D 1 
HETATM 28 C C23 BJX . . . DA 6 106.72 181.041 167.231 1 176 ? C23 BJX 1603 D 1 
HETATM 29 C C24 BJX . . . DA 6 107.073 179.755 167.906 1 185.12 ? C24 BJX 1603 D 1 
HETATM 30 C C25 BJX . . . DA 6 106.277 179.28 164.273 1 188.2 ? C25 BJX 1603 D 1 
HETATM 31 C C26 BJX . . . DA 6 106.353 179.704 162.82 1 185.71 ? C26 BJX 1603 D 1 
HETATM 32 N N1 BJX . . . DA 6 104.009 183.517 164.008 1 183.26 ? N1 BJX 1603 D 1 
HETATM 33 O O3 BJX . . . DA 6 106.409 179.341 168.84 1 199.82 ? O3 BJX 1603 D 1 
#
_model_server_stats.io_time_ms              26 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    72 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           33 
#