data_6JB1
#
_model_server_result.job_id            l_DmugqE5mo0hhuGqG69Kg 
_model_server_result.datetime_utc      '2024-11-04 22:45:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jb1 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"YA","auth_seq_id":1607}' 
#
_entry.id    6JB1 
#
_exptl.entry_id    6JB1 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              760.076 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_entity.pdbx_number_of_molecules    36 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JB1 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JB1 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
? 3 S N N 
? 3 T N N 
? 3 U N N 
? 3 AA N N 
? 3 EA N N 
? 3 FA N N 
? 3 GA N N 
? 3 HA N N 
? 3 IA N N 
? 3 JA N N 
? 3 KA N N 
? 3 LA N N 
? 3 RA N N 
? 3 VA N N 
? 3 WA N N 
? 3 XA N N 
? 3 YA N N 
? 3 ZA N N 
? 3 AB N N 
? 3 BB N N 
? 3 CB N N 
? 3 IB N N 
? 3 MB N N 
? 3 NB N N 
? 3 OB N N 
? 3 PB N N 
? 3 QB N N 
? 3 RB N N 
? 3 SB N N 
? 3 TB N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf4 D SG CYS 6 D CYS 6 1_555 D SG CYS 26 D CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf5 E SG CYS 110 E CYS 110 1_555 E SG CYS 142 E CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf6 F SG CYS 6 F CYS 6 1_555 F SG CYS 26 F CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf7 G SG CYS 110 G CYS 110 1_555 G SG CYS 142 G CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf8 H SG CYS 6 H CYS 6 1_555 H SG CYS 26 H CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
#
_chem_comp.formula           'C42 H82 N O8 P' 
_chem_comp.formula_weight    760.076 
_chem_comp.id                POV 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     POPC 
#
_atom_sites.entry_id                     6JB1 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 POV A 1 401 4006 POV POV . 
J 4 AGS A 1 402 401 AGS AGS . 
K 5 AJP B 1 1601 2002 AJP AJP . 
L 4 AGS B 1 1602 2501 AGS AGS . 
M 6 BJX B 1 1603 3001 BJX RPG . 
N 3 POV B 1 1604 4001 POV POV . 
O 3 POV B 1 1605 4002 POV POV . 
P 3 POV B 1 1606 4003 POV POV . 
Q 3 POV B 1 1607 4004 POV POV . 
R 3 POV B 1 1608 4005 POV POV . 
S 3 POV B 1 1609 4007 POV POV . 
T 3 POV B 1 1610 4008 POV POV . 
U 3 POV B 1 1611 4009 POV POV . 
V 7 PTY B 1 1612 4011 PTY PTY . 
W 7 PTY B 1 1613 4012 PTY PTY . 
X 7 PTY B 1 1614 4013 PTY PTY . 
Y 7 PTY B 1 1615 4014 PTY PTY . 
Z 4 AGS C 1 401 401 AGS AGS . 
AA 3 POV C 1 402 4006 POV POV . 
BA 5 AJP D 1 1601 2002 AJP AJP . 
CA 4 AGS D 1 1602 2501 AGS AGS . 
DA 6 BJX D 1 1603 3001 BJX RPG . 
EA 3 POV D 1 1604 4001 POV POV . 
FA 3 POV D 1 1605 4002 POV POV . 
GA 3 POV D 1 1606 4003 POV POV . 
HA 3 POV D 1 1607 4004 POV POV . 
IA 3 POV D 1 1608 4005 POV POV . 
JA 3 POV D 1 1609 4007 POV POV . 
KA 3 POV D 1 1610 4008 POV POV . 
LA 3 POV D 1 1611 4009 POV POV . 
MA 7 PTY D 1 1612 4011 PTY PTY . 
NA 7 PTY D 1 1613 4012 PTY PTY . 
OA 7 PTY D 1 1614 4013 PTY PTY . 
PA 7 PTY D 1 1615 4014 PTY PTY . 
QA 4 AGS E 1 401 401 AGS AGS . 
RA 3 POV E 1 402 4006 POV POV . 
SA 5 AJP F 1 1601 2002 AJP AJP . 
TA 4 AGS F 1 1602 2501 AGS AGS . 
UA 6 BJX F 1 1603 3001 BJX RPG . 
VA 3 POV F 1 1604 4001 POV POV . 
WA 3 POV F 1 1605 4002 POV POV . 
XA 3 POV F 1 1606 4003 POV POV . 
YA 3 POV F 1 1607 4004 POV POV . 
ZA 3 POV F 1 1608 4005 POV POV . 
AB 3 POV F 1 1609 4007 POV POV . 
BB 3 POV F 1 1610 4008 POV POV . 
CB 3 POV F 1 1611 4009 POV POV . 
DB 7 PTY F 1 1612 4011 PTY PTY . 
EB 7 PTY F 1 1613 4012 PTY PTY . 
FB 7 PTY F 1 1614 4013 PTY PTY . 
GB 7 PTY F 1 1615 4014 PTY PTY . 
HB 4 AGS G 1 401 401 AGS AGS . 
IB 3 POV G 1 402 4006 POV POV . 
JB 5 AJP H 1 1601 2002 AJP AJP . 
KB 4 AGS H 1 1602 2501 AGS AGS . 
LB 6 BJX H 1 1603 3001 BJX RPG . 
MB 3 POV H 1 1604 4001 POV POV . 
NB 3 POV H 1 1605 4002 POV POV . 
OB 3 POV H 1 1606 4003 POV POV . 
PB 3 POV H 1 1607 4004 POV POV . 
QB 3 POV H 1 1608 4005 POV POV . 
RB 3 POV H 1 1609 4007 POV POV . 
SB 3 POV H 1 1610 4008 POV POV . 
TB 3 POV H 1 1611 4009 POV POV . 
UB 7 PTY H 1 1612 4011 PTY PTY . 
VB 7 PTY H 1 1613 4012 PTY PTY . 
WB 7 PTY H 1 1614 4013 PTY PTY . 
XB 7 PTY H 1 1615 4014 PTY PTY . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N POV . . . YA 3 173.617 142.109 129.477 1 158.09 ? N POV 1607 F 1 
HETATM 2 P P POV . . . YA 3 169.612 144.389 128.625 1 158.09 ? P POV 1607 F 1 
HETATM 3 C C1 POV . . . YA 3 168.612 145.579 130.784 1 158.09 ? C1 POV 1607 F 1 
HETATM 4 C C2 POV . . . YA 3 168.889 145.563 132.283 1 158.09 ? C2 POV 1607 F 1 
HETATM 5 C C3 POV . . . YA 3 169.018 144.106 132.72 1 158.09 ? C3 POV 1607 F 1 
HETATM 6 C C210 POV . . . YA 3 171.297 147.331 143.822 1 158.09 ? C210 POV 1607 F 1 
HETATM 7 C C11 POV . . . YA 3 171.162 142.25 129.117 1 158.09 ? C11 POV 1607 F 1 
HETATM 8 O O11 POV . . . YA 3 169.222 144.429 130.195 1 158.09 ? O11 POV 1607 F 1 
HETATM 9 C C211 POV . . . YA 3 172.228 148.516 143.983 1 158.09 ? C211 POV 1607 F 1 
HETATM 10 C C12 POV . . . YA 3 172.455 143.021 129.396 1 158.09 ? C12 POV 1607 F 1 
HETATM 11 O O12 POV . . . YA 3 170.283 142.967 128.24 1 158.09 ? O12 POV 1607 F 1 
HETATM 12 C C212 POV . . . YA 3 172.988 148.393 145.304 1 158.09 ? C212 POV 1607 F 1 
HETATM 13 C C13 POV . . . YA 3 173.936 141.585 128.135 1 158.09 ? C13 POV 1607 F 1 
HETATM 14 O O13 POV . . . YA 3 168.356 144.581 127.805 1 158.09 ? O13 POV 1607 F 1 
HETATM 15 C C213 POV . . . YA 3 173.978 149.536 145.5 1 158.09 ? C213 POV 1607 F 1 
HETATM 16 C C14 POV . . . YA 3 174.785 142.836 130.002 1 158.09 ? C14 POV 1607 F 1 
HETATM 17 O O14 POV . . . YA 3 170.599 145.497 128.309 1 158.09 ? O14 POV 1607 F 1 
HETATM 18 C C214 POV . . . YA 3 174.57 149.532 146.904 1 158.09 ? C214 POV 1607 F 1 
HETATM 19 C C15 POV . . . YA 3 173.326 140.986 130.388 1 158.09 ? C15 POV 1607 F 1 
HETATM 20 C C21 POV . . . YA 3 168.174 146.749 134.313 1 158.09 ? C21 POV 1607 F 1 
HETATM 21 O O21 POV . . . YA 3 167.836 146.236 132.982 1 158.09 ? O21 POV 1607 F 1 
HETATM 22 C C22 POV . . . YA 3 169.61 146.958 134.748 1 158.09 ? C22 POV 1607 F 1 
HETATM 23 O O22 POV . . . YA 3 167.264 147.028 135.085 1 158.09 ? O22 POV 1607 F 1 
HETATM 24 C C23 POV . . . YA 3 169.698 146.895 136.272 1 158.09 ? C23 POV 1607 F 1 
HETATM 25 C C24 POV . . . YA 3 171.121 147.134 136.774 1 158.09 ? C24 POV 1607 F 1 
HETATM 26 C C25 POV . . . YA 3 171.211 146.991 138.293 1 158.09 ? C25 POV 1607 F 1 
HETATM 27 C C26 POV . . . YA 3 170.484 148.122 139.015 1 158.09 ? C26 POV 1607 F 1 
HETATM 28 C C27 POV . . . YA 3 170.128 147.736 140.448 1 158.09 ? C27 POV 1607 F 1 
HETATM 29 C C28 POV . . . YA 3 171.358 147.497 141.322 1 158.09 ? C28 POV 1607 F 1 
HETATM 30 C C29 POV . . . YA 3 170.913 146.871 142.628 1 158.09 ? C29 POV 1607 F 1 
HETATM 31 C C31 POV . . . YA 3 170.577 142.777 134.18 1 158.09 ? C31 POV 1607 F 1 
HETATM 32 O O31 POV . . . YA 3 170.267 143.961 133.398 1 158.09 ? O31 POV 1607 F 1 
HETATM 33 C C32 POV . . . YA 3 170.297 142.725 135.678 1 158.09 ? C32 POV 1607 F 1 
HETATM 34 O O32 POV . . . YA 3 171.078 141.829 133.59 1 158.09 ? O32 POV 1607 F 1 
HETATM 35 C C33 POV . . . YA 3 168.894 143.239 136.014 1 158.09 ? C33 POV 1607 F 1 
HETATM 36 C C34 POV . . . YA 3 168.332 142.67 137.312 1 158.09 ? C34 POV 1607 F 1 
HETATM 37 C C35 POV . . . YA 3 169.133 143.141 138.519 1 158.09 ? C35 POV 1607 F 1 
HETATM 38 C C36 POV . . . YA 3 168.529 142.631 139.823 1 158.09 ? C36 POV 1607 F 1 
HETATM 39 C C37 POV . . . YA 3 169.351 143.078 141.027 1 158.09 ? C37 POV 1607 F 1 
HETATM 40 C C38 POV . . . YA 3 170.797 142.613 140.908 1 158.09 ? C38 POV 1607 F 1 
HETATM 41 C C39 POV . . . YA 3 171.631 143.107 142.085 1 158.09 ? C39 POV 1607 F 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    78 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           41 
#