data_6JB1 # _model_server_result.job_id kSYhfvJFY8uGSQoAwashbw _model_server_result.datetime_utc '2024-11-04 22:47:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"XB","auth_seq_id":1615}' # _entry.id 6JB1 # _exptl.entry_id 6JB1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 734.039 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHATIDYLETHANOLAMINE _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JB1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 V N N ? 7 W N N ? 7 X N N ? 7 Y N N ? 7 MA N N ? 7 NA N N ? 7 OA N N ? 7 PA N N ? 7 DB N N ? 7 EB N N ? 7 FB N N ? 7 GB N N ? 7 UB N N ? 7 VB N N ? 7 WB N N ? 7 XB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 110 A CYS 110 1_555 A SG CYS 142 A CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 B SG CYS 6 B CYS 6 1_555 B SG CYS 26 B CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf3 C SG CYS 110 C CYS 110 1_555 C SG CYS 142 C CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf4 D SG CYS 6 D CYS 6 1_555 D SG CYS 26 D CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 E SG CYS 110 E CYS 110 1_555 E SG CYS 142 E CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf6 F SG CYS 6 F CYS 6 1_555 F SG CYS 26 F CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf7 G SG CYS 110 G CYS 110 1_555 G SG CYS 142 G CYS 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 H SG CYS 6 H CYS 6 1_555 H SG CYS 26 H CYS 26 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C40 H80 N O8 P' _chem_comp.formula_weight 734.039 _chem_comp.id PTY _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHATIDYLETHANOLAMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JB1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 POV A 1 401 4006 POV POV . J 4 AGS A 1 402 401 AGS AGS . K 5 AJP B 1 1601 2002 AJP AJP . L 4 AGS B 1 1602 2501 AGS AGS . M 6 BJX B 1 1603 3001 BJX RPG . N 3 POV B 1 1604 4001 POV POV . O 3 POV B 1 1605 4002 POV POV . P 3 POV B 1 1606 4003 POV POV . Q 3 POV B 1 1607 4004 POV POV . R 3 POV B 1 1608 4005 POV POV . S 3 POV B 1 1609 4007 POV POV . T 3 POV B 1 1610 4008 POV POV . U 3 POV B 1 1611 4009 POV POV . V 7 PTY B 1 1612 4011 PTY PTY . W 7 PTY B 1 1613 4012 PTY PTY . X 7 PTY B 1 1614 4013 PTY PTY . Y 7 PTY B 1 1615 4014 PTY PTY . Z 4 AGS C 1 401 401 AGS AGS . AA 3 POV C 1 402 4006 POV POV . BA 5 AJP D 1 1601 2002 AJP AJP . CA 4 AGS D 1 1602 2501 AGS AGS . DA 6 BJX D 1 1603 3001 BJX RPG . EA 3 POV D 1 1604 4001 POV POV . FA 3 POV D 1 1605 4002 POV POV . GA 3 POV D 1 1606 4003 POV POV . HA 3 POV D 1 1607 4004 POV POV . IA 3 POV D 1 1608 4005 POV POV . JA 3 POV D 1 1609 4007 POV POV . KA 3 POV D 1 1610 4008 POV POV . LA 3 POV D 1 1611 4009 POV POV . MA 7 PTY D 1 1612 4011 PTY PTY . NA 7 PTY D 1 1613 4012 PTY PTY . OA 7 PTY D 1 1614 4013 PTY PTY . PA 7 PTY D 1 1615 4014 PTY PTY . QA 4 AGS E 1 401 401 AGS AGS . RA 3 POV E 1 402 4006 POV POV . SA 5 AJP F 1 1601 2002 AJP AJP . TA 4 AGS F 1 1602 2501 AGS AGS . UA 6 BJX F 1 1603 3001 BJX RPG . VA 3 POV F 1 1604 4001 POV POV . WA 3 POV F 1 1605 4002 POV POV . XA 3 POV F 1 1606 4003 POV POV . YA 3 POV F 1 1607 4004 POV POV . ZA 3 POV F 1 1608 4005 POV POV . AB 3 POV F 1 1609 4007 POV POV . BB 3 POV F 1 1610 4008 POV POV . CB 3 POV F 1 1611 4009 POV POV . DB 7 PTY F 1 1612 4011 PTY PTY . EB 7 PTY F 1 1613 4012 PTY PTY . FB 7 PTY F 1 1614 4013 PTY PTY . GB 7 PTY F 1 1615 4014 PTY PTY . HB 4 AGS G 1 401 401 AGS AGS . IB 3 POV G 1 402 4006 POV POV . JB 5 AJP H 1 1601 2002 AJP AJP . KB 4 AGS H 1 1602 2501 AGS AGS . LB 6 BJX H 1 1603 3001 BJX RPG . MB 3 POV H 1 1604 4001 POV POV . NB 3 POV H 1 1605 4002 POV POV . OB 3 POV H 1 1606 4003 POV POV . PB 3 POV H 1 1607 4004 POV POV . QB 3 POV H 1 1608 4005 POV POV . RB 3 POV H 1 1609 4007 POV POV . SB 3 POV H 1 1610 4008 POV POV . TB 3 POV H 1 1611 4009 POV POV . UB 7 PTY H 1 1612 4011 PTY PTY . VB 7 PTY H 1 1613 4012 PTY PTY . WB 7 PTY H 1 1614 4013 PTY PTY . XB 7 PTY H 1 1615 4014 PTY PTY . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PTY . . . XB 7 219.173 150.759 160.433 1 150.53 ? C1 PTY 1615 H 1 HETATM 2 C C2 PTY . . . XB 7 216.084 147.252 166.465 1 150.53 ? C2 PTY 1615 H 1 HETATM 3 C C3 PTY . . . XB 7 217.441 147.733 165.97 1 150.53 ? C3 PTY 1615 H 1 HETATM 4 C C5 PTY . . . XB 7 217.842 151.297 162.458 1 150.53 ? C5 PTY 1615 H 1 HETATM 5 C C6 PTY . . . XB 7 218.121 151.694 161.008 1 150.53 ? C6 PTY 1615 H 1 HETATM 6 O O7 PTY . . . XB 7 216.935 151.621 160.214 1 150.53 ? O7 PTY 1615 H 1 HETATM 7 C C8 PTY . . . XB 7 217.13 151.991 158.81 1 150.53 ? C8 PTY 1615 H 1 HETATM 8 O O10 PTY . . . XB 7 217.474 151.145 157.989 1 150.53 ? O10 PTY 1615 H 1 HETATM 9 C C11 PTY . . . XB 7 216.877 153.414 158.36 1 150.53 ? C11 PTY 1615 H 1 HETATM 10 C C12 PTY . . . XB 7 215.866 153.437 157.215 1 150.53 ? C12 PTY 1615 H 1 HETATM 11 C C13 PTY . . . XB 7 216.543 153.231 155.863 1 150.53 ? C13 PTY 1615 H 1 HETATM 12 C C14 PTY . . . XB 7 216.706 154.557 155.134 1 150.53 ? C14 PTY 1615 H 1 HETATM 13 C C15 PTY . . . XB 7 215.919 154.575 153.831 1 150.53 ? C15 PTY 1615 H 1 HETATM 14 C C16 PTY . . . XB 7 215.918 155.975 153.228 1 150.53 ? C16 PTY 1615 H 1 HETATM 15 C C17 PTY . . . XB 7 215.548 157.032 154.265 1 150.53 ? C17 PTY 1615 H 1 HETATM 16 P P1 PTY . . . XB 7 218.479 149.234 164.028 1 150.53 ? P1 PTY 1615 H 1 HETATM 17 O O11 PTY . . . XB 7 217.235 148.644 164.886 1 150.53 ? O11 PTY 1615 H 1 HETATM 18 O O12 PTY . . . XB 7 219.206 150.304 164.829 1 150.53 ? O12 PTY 1615 H 1 HETATM 19 O O13 PTY . . . XB 7 219.402 148.069 163.733 1 150.53 ? O13 PTY 1615 H 1 HETATM 20 O O14 PTY . . . XB 7 217.975 149.882 162.628 1 150.53 ? O14 PTY 1615 H 1 HETATM 21 N N1 PTY . . . XB 7 216.254 146.129 167.397 1 150.53 ? N1 PTY 1615 H 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 72 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #