data_6JD7
#
_model_server_result.job_id            1Hw-0Vc1qTEXfxuQVTWzHA 
_model_server_result.datetime_utc      '2024-12-28 23:51:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jd7 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":201}' 
#
_entry.id    6JD7 
#
_exptl.entry_id    6JD7 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          129.8 
_cell.angle_gamma         90 
_cell.entry_id            6JD7 
_cell.length_a            105.559 
_cell.length_b            73.532 
_cell.length_c            81.087 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JD7 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G 1 1 
C,H 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_657 -x+1,y,-z+2 -1 0 0 0 1 0 0 0 -1 1.74985 0 124.595612 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D MG MG . A MG 201 1_555 F O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.094 ? 
metalc ? metalc2 D MG MG . A MG 201 1_555 F O HOH . A HOH 311 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? 
metalc ? metalc3 D MG MG . A MG 201 1_555 G O HOH . B HOH 301 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? 
metalc ? metalc4 D MG MG . A MG 201 1_555 G O HOH . B HOH 317 4_546 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc5 D MG MG . A MG 201 1_555 H O HOH . C HOH 206 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? 
metalc ? metalc6 D MG MG . A MG 201 1_555 H O HOH . C HOH 219 3_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6JD7 
_atom_sites.fract_transf_matrix[1][1]    0.009473 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007894 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.0136 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016053 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 MG A 1 201 1 MG MG . 
E 3 ACT B 1 201 1 ACT ACT . 
F 4 HOH A 1 301 1 HOH HOH . 
F 4 HOH A 2 302 65 HOH HOH . 
F 4 HOH A 3 303 24 HOH HOH . 
F 4 HOH A 4 304 47 HOH HOH . 
F 4 HOH A 5 305 70 HOH HOH . 
F 4 HOH A 6 306 92 HOH HOH . 
F 4 HOH A 7 307 19 HOH HOH . 
F 4 HOH A 8 308 126 HOH HOH . 
F 4 HOH A 9 309 113 HOH HOH . 
F 4 HOH A 10 310 93 HOH HOH . 
F 4 HOH A 11 311 66 HOH HOH . 
F 4 HOH A 12 312 85 HOH HOH . 
F 4 HOH A 13 313 11 HOH HOH . 
F 4 HOH A 14 314 7 HOH HOH . 
F 4 HOH A 15 315 40 HOH HOH . 
F 4 HOH A 16 316 86 HOH HOH . 
F 4 HOH A 17 317 81 HOH HOH . 
F 4 HOH A 18 318 2 HOH HOH . 
F 4 HOH A 19 319 125 HOH HOH . 
F 4 HOH A 20 320 35 HOH HOH . 
F 4 HOH A 21 321 38 HOH HOH . 
F 4 HOH A 22 322 118 HOH HOH . 
F 4 HOH A 23 323 83 HOH HOH . 
F 4 HOH A 24 324 80 HOH HOH . 
F 4 HOH A 25 325 9 HOH HOH . 
F 4 HOH A 26 326 29 HOH HOH . 
F 4 HOH A 27 327 18 HOH HOH . 
F 4 HOH A 28 328 15 HOH HOH . 
F 4 HOH A 29 329 69 HOH HOH . 
F 4 HOH A 30 330 28 HOH HOH . 
F 4 HOH A 31 331 20 HOH HOH . 
F 4 HOH A 32 332 82 HOH HOH . 
F 4 HOH A 33 333 122 HOH HOH . 
F 4 HOH A 34 334 37 HOH HOH . 
F 4 HOH A 35 335 98 HOH HOH . 
F 4 HOH A 36 336 48 HOH HOH . 
F 4 HOH A 37 337 42 HOH HOH . 
F 4 HOH A 38 338 120 HOH HOH . 
F 4 HOH A 39 339 34 HOH HOH . 
F 4 HOH A 40 340 89 HOH HOH . 
F 4 HOH A 41 341 104 HOH HOH . 
F 4 HOH A 42 342 127 HOH HOH . 
F 4 HOH A 43 343 94 HOH HOH . 
F 4 HOH A 44 344 87 HOH HOH . 
F 4 HOH A 45 345 51 HOH HOH . 
F 4 HOH A 46 346 54 HOH HOH . 
F 4 HOH A 47 347 50 HOH HOH . 
F 4 HOH A 48 348 105 HOH HOH . 
F 4 HOH A 49 349 88 HOH HOH . 
F 4 HOH A 50 350 129 HOH HOH . 
F 4 HOH A 51 351 97 HOH HOH . 
F 4 HOH A 52 352 99 HOH HOH . 
F 4 HOH A 53 353 84 HOH HOH . 
F 4 HOH A 54 354 95 HOH HOH . 
G 4 HOH B 1 301 68 HOH HOH . 
G 4 HOH B 2 302 114 HOH HOH . 
G 4 HOH B 3 303 22 HOH HOH . 
G 4 HOH B 4 304 108 HOH HOH . 
G 4 HOH B 5 305 8 HOH HOH . 
G 4 HOH B 6 306 75 HOH HOH . 
G 4 HOH B 7 307 4 HOH HOH . 
G 4 HOH B 8 308 26 HOH HOH . 
G 4 HOH B 9 309 13 HOH HOH . 
G 4 HOH B 10 310 23 HOH HOH . 
G 4 HOH B 11 311 5 HOH HOH . 
G 4 HOH B 12 312 124 HOH HOH . 
G 4 HOH B 13 313 76 HOH HOH . 
G 4 HOH B 14 314 16 HOH HOH . 
G 4 HOH B 15 315 96 HOH HOH . 
G 4 HOH B 16 316 45 HOH HOH . 
G 4 HOH B 17 317 64 HOH HOH . 
G 4 HOH B 18 318 6 HOH HOH . 
G 4 HOH B 19 319 27 HOH HOH . 
G 4 HOH B 20 320 25 HOH HOH . 
G 4 HOH B 21 321 33 HOH HOH . 
G 4 HOH B 22 322 43 HOH HOH . 
G 4 HOH B 23 323 102 HOH HOH . 
G 4 HOH B 24 324 115 HOH HOH . 
G 4 HOH B 25 325 14 HOH HOH . 
G 4 HOH B 26 326 44 HOH HOH . 
G 4 HOH B 27 327 36 HOH HOH . 
G 4 HOH B 28 328 117 HOH HOH . 
G 4 HOH B 29 329 116 HOH HOH . 
G 4 HOH B 30 330 100 HOH HOH . 
G 4 HOH B 31 331 32 HOH HOH . 
G 4 HOH B 32 332 56 HOH HOH . 
G 4 HOH B 33 333 55 HOH HOH . 
G 4 HOH B 34 334 90 HOH HOH . 
G 4 HOH B 35 335 39 HOH HOH . 
G 4 HOH B 36 336 73 HOH HOH . 
G 4 HOH B 37 337 74 HOH HOH . 
G 4 HOH B 38 338 109 HOH HOH . 
G 4 HOH B 39 339 72 HOH HOH . 
G 4 HOH B 40 340 121 HOH HOH . 
G 4 HOH B 41 341 52 HOH HOH . 
G 4 HOH B 42 342 91 HOH HOH . 
G 4 HOH B 43 343 111 HOH HOH . 
G 4 HOH B 44 344 110 HOH HOH . 
G 4 HOH B 45 345 101 HOH HOH . 
H 4 HOH C 1 201 30 HOH HOH . 
H 4 HOH C 2 202 61 HOH HOH . 
H 4 HOH C 3 203 3 HOH HOH . 
H 4 HOH C 4 204 10 HOH HOH . 
H 4 HOH C 5 205 12 HOH HOH . 
H 4 HOH C 6 206 67 HOH HOH . 
H 4 HOH C 7 207 128 HOH HOH . 
H 4 HOH C 8 208 60 HOH HOH . 
H 4 HOH C 9 209 78 HOH HOH . 
H 4 HOH C 10 210 57 HOH HOH . 
H 4 HOH C 11 211 112 HOH HOH . 
H 4 HOH C 12 212 17 HOH HOH . 
H 4 HOH C 13 213 106 HOH HOH . 
H 4 HOH C 14 214 31 HOH HOH . 
H 4 HOH C 15 215 123 HOH HOH . 
H 4 HOH C 16 216 62 HOH HOH . 
H 4 HOH C 17 217 53 HOH HOH . 
H 4 HOH C 18 218 46 HOH HOH . 
H 4 HOH C 19 219 63 HOH HOH . 
H 4 HOH C 20 220 21 HOH HOH . 
H 4 HOH C 21 221 107 HOH HOH . 
H 4 HOH C 22 222 103 HOH HOH . 
H 4 HOH C 23 223 41 HOH HOH . 
H 4 HOH C 24 224 58 HOH HOH . 
H 4 HOH C 25 225 59 HOH HOH . 
H 4 HOH C 26 226 79 HOH HOH . 
H 4 HOH C 27 227 77 HOH HOH . 
H 4 HOH C 28 228 119 HOH HOH . 
H 4 HOH C 29 229 49 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               16.391 
_atom_site.Cartn_y               0.345 
_atom_site.Cartn_z               20.585 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        31.36 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           201 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           227 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#