data_6JDC # _model_server_result.job_id R-2P21fNlpDV0YI9EB1I1w _model_server_result.datetime_utc '2024-11-14 04:18:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jdc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6JDC # _exptl.entry_id 6JDC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JDC _cell.length_a 91.102 _cell.length_b 91.102 _cell.length_c 184.033 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JDC _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+1 0 -1 0 -1 0 0 0 0 -1 91.102 91.102 184.033 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 156 A HIS 156 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc2 A SG CYS 166 A CYS 166 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.285 ? metalc ? metalc3 A SG CYS 168 A CYS 168 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc4 A SG CYS 173 A CYS 173 1_555 C ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JDC _atom_sites.fract_transf_matrix[1][1] 0.010977 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010977 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005434 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BM3 A 1 301 1 BM3 BM3 . C 3 ZN A 1 302 1 ZN ZN . D 4 HOH A 1 401 6 HOH HOH . D 4 HOH A 2 402 19 HOH HOH . D 4 HOH A 3 403 11 HOH HOH . D 4 HOH A 4 404 2 HOH HOH . D 4 HOH A 5 405 29 HOH HOH . D 4 HOH A 6 406 22 HOH HOH . D 4 HOH A 7 407 38 HOH HOH . D 4 HOH A 8 408 30 HOH HOH . D 4 HOH A 9 409 18 HOH HOH . D 4 HOH A 10 410 16 HOH HOH . D 4 HOH A 11 411 44 HOH HOH . D 4 HOH A 12 412 34 HOH HOH . D 4 HOH A 13 413 3 HOH HOH . D 4 HOH A 14 414 23 HOH HOH . D 4 HOH A 15 415 40 HOH HOH . D 4 HOH A 16 416 32 HOH HOH . D 4 HOH A 17 417 42 HOH HOH . D 4 HOH A 18 418 20 HOH HOH . D 4 HOH A 19 419 5 HOH HOH . D 4 HOH A 20 420 7 HOH HOH . D 4 HOH A 21 421 12 HOH HOH . D 4 HOH A 22 422 31 HOH HOH . D 4 HOH A 23 423 10 HOH HOH . D 4 HOH A 24 424 41 HOH HOH . D 4 HOH A 25 425 1 HOH HOH . D 4 HOH A 26 426 14 HOH HOH . D 4 HOH A 27 427 21 HOH HOH . D 4 HOH A 28 428 4 HOH HOH . D 4 HOH A 29 429 17 HOH HOH . D 4 HOH A 30 430 27 HOH HOH . D 4 HOH A 31 431 49 HOH HOH . D 4 HOH A 32 432 52 HOH HOH . D 4 HOH A 33 433 54 HOH HOH . D 4 HOH A 34 434 48 HOH HOH . D 4 HOH A 35 435 36 HOH HOH . D 4 HOH A 36 436 8 HOH HOH . D 4 HOH A 37 437 15 HOH HOH . D 4 HOH A 38 438 26 HOH HOH . D 4 HOH A 39 439 13 HOH HOH . D 4 HOH A 40 440 37 HOH HOH . D 4 HOH A 41 441 24 HOH HOH . D 4 HOH A 42 442 51 HOH HOH . D 4 HOH A 43 443 33 HOH HOH . D 4 HOH A 44 444 9 HOH HOH . D 4 HOH A 45 445 39 HOH HOH . D 4 HOH A 46 446 55 HOH HOH . D 4 HOH A 47 447 50 HOH HOH . D 4 HOH A 48 448 53 HOH HOH . D 4 HOH A 49 449 47 HOH HOH . D 4 HOH A 50 450 28 HOH HOH . D 4 HOH A 51 451 35 HOH HOH . D 4 HOH A 52 452 45 HOH HOH . D 4 HOH A 53 453 25 HOH HOH . D 4 HOH A 54 454 46 HOH HOH . D 4 HOH A 55 455 43 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 25.513 _atom_site.Cartn_y 57.56 _atom_site.Cartn_z 81.573 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.74 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 302 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 44 _model_server_stats.parse_time_ms 34 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #