data_6JEN # _model_server_result.job_id 3LwORmVvoCvmGbd5daDbog _model_server_result.datetime_utc '2024-12-03 02:01:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jen # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 6JEN # _exptl.entry_id 6JEN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 256.296 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Pterostilbene _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JEN _cell.length_a 56.718 _cell.length_b 136.883 _cell.length_c 205.136 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JEN _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,E 1 1 B,F,G 2 1 C,H,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 F N N ? 2 H N N # _chem_comp.formula 'C16 H16 O3' _chem_comp.formula_weight 256.296 _chem_comp.id 3RL _chem_comp.mon_nstd_flag . _chem_comp.name Pterostilbene _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OAC CAO 3RL sing 1 n n CAO CAG 3RL doub 2 n y CAO CAF 3RL sing 3 n y CAG CAI 3RL sing 4 n y CAF CAH 3RL doub 5 n y CAI CAP 3RL doub 6 n y CAH CAP 3RL sing 7 n y CAP CAD 3RL sing 8 n n CAD CAE 3RL doub 9 e n CAE CAQ 3RL sing 10 n n CAQ CAJ 3RL doub 11 n y CAQ CAK 3RL sing 12 n y CAJ CAR 3RL sing 13 n y CAK CAS 3RL doub 14 n y CAR OAM 3RL sing 15 n n CAR CAL 3RL doub 16 n y OAM CAA 3RL sing 17 n n CAS CAL 3RL sing 18 n y CAS OAN 3RL sing 19 n n OAN CAB 3RL sing 20 n n CAA HAC 3RL sing 21 n n CAA HAB 3RL sing 22 n n CAA HAA 3RL sing 23 n n CAJ HAM 3RL sing 24 n n CAL HAO 3RL sing 25 n n CAB HAD 3RL sing 26 n n CAB HAE 3RL sing 27 n n CAB HAF 3RL sing 28 n n CAK HAN 3RL sing 29 n n CAE HAH 3RL sing 30 n n CAD HAG 3RL sing 31 n n CAH HAK 3RL sing 32 n n CAF HAI 3RL sing 33 n n OAC HAP 3RL sing 34 n n CAG HAJ 3RL sing 35 n n CAI HAL 3RL sing 36 n n # _atom_sites.entry_id 6JEN _atom_sites.fract_transf_matrix[1][1] 0.017631 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007306 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004875 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 3RL A 1 501 501 3RL 3RL . E 3 U2F A 1 502 1 U2F U2F . F 2 3RL B 1 501 501 3RL 3RL . G 3 U2F B 1 502 2 U2F U2F . H 2 3RL C 1 501 501 3RL 3RL . I 3 U2F C 1 502 3 U2F U2F . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA 3RL . . . H 2 30.892 60.21 21.5 1 106.09 ? CAA 3RL 501 C 1 HETATM 2 O OAM 3RL . . . H 2 30.231 61.389 21.028 1 100.32 ? OAM 3RL 501 C 1 HETATM 3 C CAR 3RL . . . H 2 30.783 62.036 19.962 1 78.53 ? CAR 3RL 501 C 1 HETATM 4 C CAJ 3RL . . . H 2 32.169 62.139 19.864 1 78.39 ? CAJ 3RL 501 C 1 HETATM 5 C CAL 3RL . . . H 2 29.948 62.541 18.977 1 76.92 ? CAL 3RL 501 C 1 HETATM 6 C CAS 3RL . . . H 2 30.527 63.161 17.871 1 89.02 ? CAS 3RL 501 C 1 HETATM 7 O OAN 3RL . . . H 2 29.671 63.64 16.91 1 82.76 ? OAN 3RL 501 C 1 HETATM 8 C CAB 3RL . . . H 2 30.098 63.614 15.549 1 95.97 ? CAB 3RL 501 C 1 HETATM 9 C CAK 3RL . . . H 2 31.918 63.265 17.747 1 74.91 ? CAK 3RL 501 C 1 HETATM 10 C CAQ 3RL . . . H 2 32.749 62.751 18.749 1 78.36 ? CAQ 3RL 501 C 1 HETATM 11 C CAE 3RL . . . H 2 34.219 62.843 18.686 1 87.99 ? CAE 3RL 501 C 1 HETATM 12 C CAD 3RL . . . H 2 34.94 63.612 17.875 1 86.37 ? CAD 3RL 501 C 1 HETATM 13 C CAP 3RL . . . H 2 36.367 63.943 17.986 1 101.84 ? CAP 3RL 501 C 1 HETATM 14 C CAH 3RL . . . H 2 36.959 64.745 17.003 1 113.22 ? CAH 3RL 501 C 1 HETATM 15 C CAF 3RL . . . H 2 38.297 65.087 17.056 1 113.19 ? CAF 3RL 501 C 1 HETATM 16 C CAO 3RL . . . H 2 39.082 64.624 18.106 1 116.28 ? CAO 3RL 501 C 1 HETATM 17 O OAC 3RL . . . H 2 40.4 64.975 18.127 1 133.65 ? OAC 3RL 501 C 1 HETATM 18 C CAG 3RL . . . H 2 38.524 63.82 19.099 1 97.36 ? CAG 3RL 501 C 1 HETATM 19 C CAI 3RL . . . H 2 37.18 63.488 19.035 1 102.61 ? CAI 3RL 501 C 1 # _model_server_stats.io_time_ms 106 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 19 #