data_6JFC # _model_server_result.job_id k2L0BTrBeZXehlUjaXIwAQ _model_server_result.datetime_utc '2024-11-14 11:07:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jfc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6JFC # _exptl.entry_id 6JFC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 385.498 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ACTINONIN _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JFC _cell.length_a 44.02 _cell.length_b 122.634 _cell.length_c 148.142 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JFC _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,G 1 1 B,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 100 A CYS 103 1_555 D NI NI . A NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc2 A NE2 HIS 142 A HIS 145 1_555 D NI NI . A NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc3 A NE2 HIS 146 A HIS 149 1_555 D NI NI . A NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc4 C O2 BB2 . A BB2 201 1_555 D NI NI . A NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc5 B SG CYS 100 B CYS 103 1_555 F NI NI . B NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc6 B NE2 HIS 142 B HIS 145 1_555 F NI NI . B NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc7 B NE2 HIS 146 B HIS 149 1_555 F NI NI . B NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc8 E O2 BB2 . B BB2 201 1_555 F NI NI . B NI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? # _chem_comp.formula 'C19 H35 N3 O5' _chem_comp.formula_weight 385.498 _chem_comp.id BB2 _chem_comp.mon_nstd_flag . _chem_comp.name ACTINONIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-[(FORMYL-HYDROXY-AMINO)-METHYL]-HEPTANOIC ACID [1-(2-HYDROXYMETHYL-PYRROLIDINE-1-CARBONYL)-2-METHYL-PROPYL]-AMIDE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C5 C3 BB2 sing 70 n n C5 C6 BB2 sing 71 n n C5 H51 BB2 sing 72 n n C5 H52 BB2 sing 73 n n C3 O4 BB2 doub 74 n n C3 N1 BB2 sing 75 n n N1 O2 BB2 sing 76 n n N1 HN1 BB2 sing 77 n n O2 HO2 BB2 sing 78 n n C6 C12 BB2 sing 79 n n C6 C7 BB2 sing 80 n n C6 H6 BB2 sing 81 n n C12 O13 BB2 doub 82 n n C12 N14 BB2 sing 83 n n C7 C8 BB2 sing 84 n n C7 H71 BB2 sing 85 n n C7 H72 BB2 sing 86 n n C8 C9 BB2 sing 87 n n C8 H81 BB2 sing 88 n n C8 H82 BB2 sing 89 n n C9 C10 BB2 sing 90 n n C9 H91 BB2 sing 91 n n C9 H92 BB2 sing 92 n n C10 C11 BB2 sing 93 n n C10 H101 BB2 sing 94 n n C10 H102 BB2 sing 95 n n C11 H111 BB2 sing 96 n n C11 H112 BB2 sing 97 n n C11 H113 BB2 sing 98 n n N14 C15 BB2 sing 99 n n N14 H14 BB2 sing 100 n n C15 C16 BB2 sing 101 n n C15 C19 BB2 sing 102 n n C15 H15 BB2 sing 103 n n C16 C18 BB2 sing 104 n n C16 C17 BB2 sing 105 n n C16 H16 BB2 sing 106 n n C18 H181 BB2 sing 107 n n C18 H182 BB2 sing 108 n n C18 H183 BB2 sing 109 n n C17 H171 BB2 sing 110 n n C17 H172 BB2 sing 111 n n C17 H173 BB2 sing 112 n n C19 O20 BB2 doub 113 n n C19 N21 BB2 sing 114 n n N21 C22 BB2 sing 115 n n N21 C23 BB2 sing 116 n n C22 C25 BB2 sing 117 n n C22 C26 BB2 sing 118 n n C22 H22 BB2 sing 119 n n C23 C24 BB2 sing 120 n n C23 H231 BB2 sing 121 n n C23 H232 BB2 sing 122 n n C24 C25 BB2 sing 123 n n C24 H241 BB2 sing 124 n n C24 H242 BB2 sing 125 n n C25 H251 BB2 sing 126 n n C25 H252 BB2 sing 127 n n C26 O27 BB2 sing 128 n n C26 H261 BB2 sing 129 n n C26 H262 BB2 sing 130 n n O27 H27 BB2 sing 131 n n # _atom_sites.entry_id 6JFC _atom_sites.fract_transf_matrix[1][1] 0.022717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008154 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00675 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BB2 A 1 201 1 BB2 BB2 . D 3 NI A 1 202 1 NI NI . E 2 BB2 B 1 201 2 BB2 BB2 . F 3 NI B 1 202 2 NI NI . G 4 HOH A 1 301 47 HOH HOH . G 4 HOH A 2 302 21 HOH HOH . G 4 HOH A 3 303 6 HOH HOH . G 4 HOH A 4 304 20 HOH HOH . G 4 HOH A 5 305 44 HOH HOH . G 4 HOH A 6 306 3 HOH HOH . G 4 HOH A 7 307 33 HOH HOH . G 4 HOH A 8 308 22 HOH HOH . G 4 HOH A 9 309 10 HOH HOH . G 4 HOH A 10 310 51 HOH HOH . G 4 HOH A 11 311 16 HOH HOH . G 4 HOH A 12 312 35 HOH HOH . G 4 HOH A 13 313 19 HOH HOH . G 4 HOH A 14 314 41 HOH HOH . G 4 HOH A 15 315 30 HOH HOH . G 4 HOH A 16 316 55 HOH HOH . G 4 HOH A 17 317 14 HOH HOH . G 4 HOH A 18 318 38 HOH HOH . G 4 HOH A 19 319 9 HOH HOH . G 4 HOH A 20 320 48 HOH HOH . G 4 HOH A 21 321 50 HOH HOH . G 4 HOH A 22 322 34 HOH HOH . G 4 HOH A 23 323 8 HOH HOH . G 4 HOH A 24 324 29 HOH HOH . G 4 HOH A 25 325 1 HOH HOH . H 4 HOH B 1 301 17 HOH HOH . H 4 HOH B 2 302 24 HOH HOH . H 4 HOH B 3 303 5 HOH HOH . H 4 HOH B 4 304 36 HOH HOH . H 4 HOH B 5 305 13 HOH HOH . H 4 HOH B 6 306 7 HOH HOH . H 4 HOH B 7 307 27 HOH HOH . H 4 HOH B 8 308 31 HOH HOH . H 4 HOH B 9 309 12 HOH HOH . H 4 HOH B 10 310 11 HOH HOH . H 4 HOH B 11 311 28 HOH HOH . H 4 HOH B 12 312 15 HOH HOH . H 4 HOH B 13 313 49 HOH HOH . H 4 HOH B 14 314 2 HOH HOH . H 4 HOH B 15 315 53 HOH HOH . H 4 HOH B 16 316 18 HOH HOH . H 4 HOH B 17 317 42 HOH HOH . H 4 HOH B 18 318 46 HOH HOH . H 4 HOH B 19 319 40 HOH HOH . H 4 HOH B 20 320 39 HOH HOH . H 4 HOH B 21 321 4 HOH HOH . H 4 HOH B 22 322 32 HOH HOH . H 4 HOH B 23 323 23 HOH HOH . H 4 HOH B 24 324 26 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C5 BB2 . . . C 2 -5.645 -0.645 -21.122 1 62.86 ? C5 BB2 201 A 1 HETATM 2 C C3 BB2 . . . C 2 -6.322 -0.214 -19.841 1 63.84 ? C3 BB2 201 A 1 HETATM 3 O O4 BB2 . . . C 2 -7.415 0.331 -19.821 1 59.94 ? O4 BB2 201 A 1 HETATM 4 N N1 BB2 . . . C 2 -5.662 -0.577 -18.743 1 57.38 ? N1 BB2 201 A 1 HETATM 5 O O2 BB2 . . . C 2 -6.261 -0.551 -17.529 1 48.17 ? O2 BB2 201 A 1 HETATM 6 C C6 BB2 . . . C 2 -4.474 0.244 -21.486 1 67.32 ? C6 BB2 201 A 1 HETATM 7 C C12 BB2 . . . C 2 -4.318 0.085 -22.974 1 67.98 ? C12 BB2 201 A 1 HETATM 8 O O13 BB2 . . . C 2 -4.37 -1.019 -23.485 1 55.58 ? O13 BB2 201 A 1 HETATM 9 C C7 BB2 . . . C 2 -3.163 -0.158 -20.778 1 60.05 ? C7 BB2 201 A 1 HETATM 10 C C8 BB2 . . . C 2 -2.011 0.568 -21.444 1 56.02 ? C8 BB2 201 A 1 HETATM 11 C C9 BB2 . . . C 2 -0.831 0.797 -20.536 1 56.85 ? C9 BB2 201 A 1 HETATM 12 C C10 BB2 . . . C 2 0.013 1.886 -21.164 1 54.29 ? C10 BB2 201 A 1 HETATM 13 C C11 BB2 . . . C 2 1.08 1.225 -21.987 1 52.07 ? C11 BB2 201 A 1 HETATM 14 N N14 BB2 . . . C 2 -4.079 1.186 -23.653 1 77.76 ? N14 BB2 201 A 1 HETATM 15 C C15 BB2 . . . C 2 -3.719 1.175 -25.052 1 87.63 ? C15 BB2 201 A 1 HETATM 16 C C16 BB2 . . . C 2 -4.89 1.745 -25.9 1 81.55 ? C16 BB2 201 A 1 HETATM 17 C C18 BB2 . . . C 2 -6.224 1.893 -25.147 1 79.77 ? C18 BB2 201 A 1 HETATM 18 C C17 BB2 . . . C 2 -4.569 3.078 -26.546 1 75.73 ? C17 BB2 201 A 1 HETATM 19 C C19 BB2 . . . C 2 -2.343 1.831 -25.141 1 93.63 ? C19 BB2 201 A 1 HETATM 20 O O20 BB2 . . . C 2 -2.046 2.706 -24.324 1 98.02 ? O20 BB2 201 A 1 HETATM 21 N N21 BB2 . . . C 2 -1.461 1.411 -26.073 1 98.82 ? N21 BB2 201 A 1 HETATM 22 C C22 BB2 . . . C 2 -0.014 1.686 -25.938 1 89.75 ? C22 BB2 201 A 1 HETATM 23 C C23 BB2 . . . C 2 -1.703 0.631 -27.304 1 98.04 ? C23 BB2 201 A 1 HETATM 24 C C24 BB2 . . . C 2 -0.469 -0.257 -27.392 1 94.58 ? C24 BB2 201 A 1 HETATM 25 C C25 BB2 . . . C 2 0.597 0.421 -26.536 1 93.45 ? C25 BB2 201 A 1 HETATM 26 C C26 BB2 . . . C 2 0.395 2.93 -26.753 1 84.38 ? C26 BB2 201 A 1 HETATM 27 O O27 BB2 . . . C 2 -0.169 4.146 -26.232 1 84.56 ? O27 BB2 201 A 1 # _model_server_stats.io_time_ms 86 _model_server_stats.parse_time_ms 100 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #