data_6JFK
#
_model_server_result.job_id            d609iubs6F7JIkzJqaHBTA 
_model_server_result.datetime_utc      '2024-11-24 01:37:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jfk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":805}' 
#
_entry.id    6JFK 
#
_exptl.entry_id    6JFK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JFK 
_cell.length_a            49.624 
_cell.length_b            49.624 
_cell.length_c            388.065 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JFK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 194 n n 
C1 C2 GOL sing 195 n n 
C1 H11 GOL sing 196 n n 
C1 H12 GOL sing 197 n n 
O1 HO1 GOL sing 198 n n 
C2 O2 GOL sing 199 n n 
C2 C3 GOL sing 200 n n 
C2 H2 GOL sing 201 n n 
O2 HO2 GOL sing 202 n n 
C3 O3 GOL sing 203 n n 
C3 H31 GOL sing 204 n n 
C3 H32 GOL sing 205 n n 
O3 HO3 GOL sing 206 n n 
#
_atom_sites.entry_id                     6JFK 
_atom_sites.fract_transf_matrix[1][1]    0.020152 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020152 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002577 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 GDP A 1 801 1 GDP GDP . 
C 3 CIT A 1 802 1 CIT CIT . 
D 4 GOL A 1 803 1 GOL GOL . 
E 4 GOL A 1 804 2 GOL GOL . 
F 4 GOL A 1 805 3 GOL GOL . 
G 4 GOL A 1 806 4 GOL GOL . 
H 5 HOH A 1 901 91 HOH HOH . 
H 5 HOH A 2 902 56 HOH HOH . 
H 5 HOH A 3 903 64 HOH HOH . 
H 5 HOH A 4 904 69 HOH HOH . 
H 5 HOH A 5 905 182 HOH HOH . 
H 5 HOH A 6 906 85 HOH HOH . 
H 5 HOH A 7 907 99 HOH HOH . 
H 5 HOH A 8 908 134 HOH HOH . 
H 5 HOH A 9 909 59 HOH HOH . 
H 5 HOH A 10 910 107 HOH HOH . 
H 5 HOH A 11 911 6 HOH HOH . 
H 5 HOH A 12 912 173 HOH HOH . 
H 5 HOH A 13 913 11 HOH HOH . 
H 5 HOH A 14 914 104 HOH HOH . 
H 5 HOH A 15 915 14 HOH HOH . 
H 5 HOH A 16 916 70 HOH HOH . 
H 5 HOH A 17 917 54 HOH HOH . 
H 5 HOH A 18 918 31 HOH HOH . 
H 5 HOH A 19 919 78 HOH HOH . 
H 5 HOH A 20 920 100 HOH HOH . 
H 5 HOH A 21 921 79 HOH HOH . 
H 5 HOH A 22 922 16 HOH HOH . 
H 5 HOH A 23 923 84 HOH HOH . 
H 5 HOH A 24 924 46 HOH HOH . 
H 5 HOH A 25 925 7 HOH HOH . 
H 5 HOH A 26 926 33 HOH HOH . 
H 5 HOH A 27 927 123 HOH HOH . 
H 5 HOH A 28 928 22 HOH HOH . 
H 5 HOH A 29 929 74 HOH HOH . 
H 5 HOH A 30 930 136 HOH HOH . 
H 5 HOH A 31 931 58 HOH HOH . 
H 5 HOH A 32 932 30 HOH HOH . 
H 5 HOH A 33 933 10 HOH HOH . 
H 5 HOH A 34 934 124 HOH HOH . 
H 5 HOH A 35 935 95 HOH HOH . 
H 5 HOH A 36 936 45 HOH HOH . 
H 5 HOH A 37 937 44 HOH HOH . 
H 5 HOH A 38 938 147 HOH HOH . 
H 5 HOH A 39 939 61 HOH HOH . 
H 5 HOH A 40 940 24 HOH HOH . 
H 5 HOH A 41 941 160 HOH HOH . 
H 5 HOH A 42 942 60 HOH HOH . 
H 5 HOH A 43 943 48 HOH HOH . 
H 5 HOH A 44 944 3 HOH HOH . 
H 5 HOH A 45 945 122 HOH HOH . 
H 5 HOH A 46 946 4 HOH HOH . 
H 5 HOH A 47 947 170 HOH HOH . 
H 5 HOH A 48 948 12 HOH HOH . 
H 5 HOH A 49 949 55 HOH HOH . 
H 5 HOH A 50 950 149 HOH HOH . 
H 5 HOH A 51 951 51 HOH HOH . 
H 5 HOH A 52 952 116 HOH HOH . 
H 5 HOH A 53 953 80 HOH HOH . 
H 5 HOH A 54 954 26 HOH HOH . 
H 5 HOH A 55 955 25 HOH HOH . 
H 5 HOH A 56 956 152 HOH HOH . 
H 5 HOH A 57 957 62 HOH HOH . 
H 5 HOH A 58 958 57 HOH HOH . 
H 5 HOH A 59 959 35 HOH HOH . 
H 5 HOH A 60 960 15 HOH HOH . 
H 5 HOH A 61 961 94 HOH HOH . 
H 5 HOH A 62 962 101 HOH HOH . 
H 5 HOH A 63 963 17 HOH HOH . 
H 5 HOH A 64 964 38 HOH HOH . 
H 5 HOH A 65 965 72 HOH HOH . 
H 5 HOH A 66 966 43 HOH HOH . 
H 5 HOH A 67 967 87 HOH HOH . 
H 5 HOH A 68 968 169 HOH HOH . 
H 5 HOH A 69 969 63 HOH HOH . 
H 5 HOH A 70 970 34 HOH HOH . 
H 5 HOH A 71 971 71 HOH HOH . 
H 5 HOH A 72 972 120 HOH HOH . 
H 5 HOH A 73 973 41 HOH HOH . 
H 5 HOH A 74 974 20 HOH HOH . 
H 5 HOH A 75 975 13 HOH HOH . 
H 5 HOH A 76 976 67 HOH HOH . 
H 5 HOH A 77 977 68 HOH HOH . 
H 5 HOH A 78 978 50 HOH HOH . 
H 5 HOH A 79 979 5 HOH HOH . 
H 5 HOH A 80 980 49 HOH HOH . 
H 5 HOH A 81 981 110 HOH HOH . 
H 5 HOH A 82 982 93 HOH HOH . 
H 5 HOH A 83 983 82 HOH HOH . 
H 5 HOH A 84 984 90 HOH HOH . 
H 5 HOH A 85 985 129 HOH HOH . 
H 5 HOH A 86 986 19 HOH HOH . 
H 5 HOH A 87 987 23 HOH HOH . 
H 5 HOH A 88 988 77 HOH HOH . 
H 5 HOH A 89 989 153 HOH HOH . 
H 5 HOH A 90 990 28 HOH HOH . 
H 5 HOH A 91 991 37 HOH HOH . 
H 5 HOH A 92 992 18 HOH HOH . 
H 5 HOH A 93 993 119 HOH HOH . 
H 5 HOH A 94 994 156 HOH HOH . 
H 5 HOH A 95 995 21 HOH HOH . 
H 5 HOH A 96 996 36 HOH HOH . 
H 5 HOH A 97 997 111 HOH HOH . 
H 5 HOH A 98 998 112 HOH HOH . 
H 5 HOH A 99 999 86 HOH HOH . 
H 5 HOH A 100 1000 102 HOH HOH . 
H 5 HOH A 101 1001 53 HOH HOH . 
H 5 HOH A 102 1002 115 HOH HOH . 
H 5 HOH A 103 1003 113 HOH HOH . 
H 5 HOH A 104 1004 180 HOH HOH . 
H 5 HOH A 105 1005 96 HOH HOH . 
H 5 HOH A 106 1006 133 HOH HOH . 
H 5 HOH A 107 1007 66 HOH HOH . 
H 5 HOH A 108 1008 40 HOH HOH . 
H 5 HOH A 109 1009 109 HOH HOH . 
H 5 HOH A 110 1010 139 HOH HOH . 
H 5 HOH A 111 1011 76 HOH HOH . 
H 5 HOH A 112 1012 29 HOH HOH . 
H 5 HOH A 113 1013 108 HOH HOH . 
H 5 HOH A 114 1014 145 HOH HOH . 
H 5 HOH A 115 1015 73 HOH HOH . 
H 5 HOH A 116 1016 39 HOH HOH . 
H 5 HOH A 117 1017 98 HOH HOH . 
H 5 HOH A 118 1018 121 HOH HOH . 
H 5 HOH A 119 1019 9 HOH HOH . 
H 5 HOH A 120 1020 42 HOH HOH . 
H 5 HOH A 121 1021 2 HOH HOH . 
H 5 HOH A 122 1022 154 HOH HOH . 
H 5 HOH A 123 1023 159 HOH HOH . 
H 5 HOH A 124 1024 89 HOH HOH . 
H 5 HOH A 125 1025 144 HOH HOH . 
H 5 HOH A 126 1026 27 HOH HOH . 
H 5 HOH A 127 1027 178 HOH HOH . 
H 5 HOH A 128 1028 163 HOH HOH . 
H 5 HOH A 129 1029 52 HOH HOH . 
H 5 HOH A 130 1030 146 HOH HOH . 
H 5 HOH A 131 1031 181 HOH HOH . 
H 5 HOH A 132 1032 138 HOH HOH . 
H 5 HOH A 133 1033 179 HOH HOH . 
H 5 HOH A 134 1034 75 HOH HOH . 
H 5 HOH A 135 1035 92 HOH HOH . 
H 5 HOH A 136 1036 167 HOH HOH . 
H 5 HOH A 137 1037 171 HOH HOH . 
H 5 HOH A 138 1038 157 HOH HOH . 
H 5 HOH A 139 1039 103 HOH HOH . 
H 5 HOH A 140 1040 83 HOH HOH . 
H 5 HOH A 141 1041 177 HOH HOH . 
H 5 HOH A 142 1042 155 HOH HOH . 
H 5 HOH A 143 1043 32 HOH HOH . 
H 5 HOH A 144 1044 88 HOH HOH . 
H 5 HOH A 145 1045 128 HOH HOH . 
H 5 HOH A 146 1046 141 HOH HOH . 
H 5 HOH A 147 1047 65 HOH HOH . 
H 5 HOH A 148 1048 97 HOH HOH . 
H 5 HOH A 149 1049 143 HOH HOH . 
H 5 HOH A 150 1050 47 HOH HOH . 
H 5 HOH A 151 1051 164 HOH HOH . 
H 5 HOH A 152 1052 131 HOH HOH . 
H 5 HOH A 153 1053 132 HOH HOH . 
H 5 HOH A 154 1054 166 HOH HOH . 
H 5 HOH A 155 1055 126 HOH HOH . 
H 5 HOH A 156 1056 174 HOH HOH . 
H 5 HOH A 157 1057 135 HOH HOH . 
H 5 HOH A 158 1058 165 HOH HOH . 
H 5 HOH A 159 1059 105 HOH HOH . 
H 5 HOH A 160 1060 176 HOH HOH . 
H 5 HOH A 161 1061 1 HOH HOH . 
H 5 HOH A 162 1062 8 HOH HOH . 
H 5 HOH A 163 1063 118 HOH HOH . 
H 5 HOH A 164 1064 125 HOH HOH . 
H 5 HOH A 165 1065 114 HOH HOH . 
H 5 HOH A 166 1066 172 HOH HOH . 
H 5 HOH A 167 1067 162 HOH HOH . 
H 5 HOH A 168 1068 158 HOH HOH . 
H 5 HOH A 169 1069 81 HOH HOH . 
H 5 HOH A 170 1070 175 HOH HOH . 
H 5 HOH A 171 1071 168 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 4 3.4 -5.033 41.535 1 67.72 ? C1 GOL 805 A 1 
HETATM 2 O O1 GOL . . . F 4 3.381 -6.396 41.16 1 67 ? O1 GOL 805 A 1 
HETATM 3 C C2 GOL . . . F 4 2.391 -4.77 42.653 1 68.36 ? C2 GOL 805 A 1 
HETATM 4 O O2 GOL . . . F 4 1.254 -4.17 42.082 1 69.82 ? O2 GOL 805 A 1 
HETATM 5 C C3 GOL . . . F 4 2.979 -3.821 43.698 1 70.64 ? C3 GOL 805 A 1 
HETATM 6 O O3 GOL . . . F 4 2.241 -3.871 44.904 1 71.02 ? O3 GOL 805 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           328 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           6 
#