data_6JH8 # _model_server_result.job_id CEeRa6WR4BTRyfLR9J6wQA _model_server_result.datetime_utc '2025-03-27 09:58:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jh8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 6JH8 # _exptl.entry_id 6JH8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.4 _cell.angle_gamma 90 _cell.entry_id 6JH8 _cell.length_a 195.439 _cell.length_b 56.073 _cell.length_c 38.432 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JH8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 74 A GLU 72 1_555 A N HIC 75 A HIC 73 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale2 A C HIC 75 A HIC 73 1_555 A N GLY 76 A GLY 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A OE1 GLN 265 A GLN 263 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc2 A OG SER 267 A SER 265 1_555 E CA CA . A CA 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc3 C O2G ATP . A ATP 401 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc4 C O1B ATP . A ATP 401 1_555 D CA CA . A CA 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc5 D CA CA . A CA 402 1_555 F O HOH . A HOH 520 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc6 D CA CA . A CA 402 1_555 F O HOH . A HOH 562 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc7 D CA CA . A CA 402 1_555 F O HOH . A HOH 570 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.948 ? metalc ? metalc8 D CA CA . A CA 402 1_555 F O HOH . A HOH 571 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc9 D CA CA . A CA 402 1_555 F O HOH . A HOH 584 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc10 E CA CA . A CA 403 1_555 F O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc11 E CA CA . A CA 403 1_555 F O HOH . A HOH 667 2_756 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc12 E CA CA . A CA 403 1_555 F O HOH . A HOH 671 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc13 E CA CA . A CA 403 1_555 F O HOH . A HOH 673 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JH8 _atom_sites.fract_transf_matrix[1][1] 0.005117 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000304 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017834 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026066 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ATP A 1 401 401 ATP ATP . D 4 CA A 1 402 402 CA CA . E 4 CA A 1 403 1 CA CA . F 5 HOH A 1 501 142 HOH HOH . F 5 HOH A 2 502 112 HOH HOH . F 5 HOH A 3 503 185 HOH HOH . F 5 HOH A 4 504 147 HOH HOH . F 5 HOH A 5 505 122 HOH HOH . F 5 HOH A 6 506 37 HOH HOH . F 5 HOH A 7 507 140 HOH HOH . F 5 HOH A 8 508 187 HOH HOH . F 5 HOH A 9 509 155 HOH HOH . F 5 HOH A 10 510 80 HOH HOH . F 5 HOH A 11 511 178 HOH HOH . F 5 HOH A 12 512 180 HOH HOH . F 5 HOH A 13 513 113 HOH HOH . F 5 HOH A 14 514 108 HOH HOH . F 5 HOH A 15 515 84 HOH HOH . F 5 HOH A 16 516 224 HOH HOH . F 5 HOH A 17 517 52 HOH HOH . F 5 HOH A 18 518 46 HOH HOH . F 5 HOH A 19 519 47 HOH HOH . F 5 HOH A 20 520 8 HOH HOH . F 5 HOH A 21 521 2 HOH HOH . F 5 HOH A 22 522 62 HOH HOH . F 5 HOH A 23 523 14 HOH HOH . F 5 HOH A 24 524 10 HOH HOH . F 5 HOH A 25 525 123 HOH HOH . F 5 HOH A 26 526 104 HOH HOH . F 5 HOH A 27 527 150 HOH HOH . F 5 HOH A 28 528 12 HOH HOH . F 5 HOH A 29 529 49 HOH HOH . F 5 HOH A 30 530 78 HOH HOH . F 5 HOH A 31 531 45 HOH HOH . F 5 HOH A 32 532 163 HOH HOH . F 5 HOH A 33 533 16 HOH HOH . F 5 HOH A 34 534 71 HOH HOH . F 5 HOH A 35 535 43 HOH HOH . F 5 HOH A 36 536 188 HOH HOH . F 5 HOH A 37 537 36 HOH HOH . F 5 HOH A 38 538 115 HOH HOH . F 5 HOH A 39 539 90 HOH HOH . F 5 HOH A 40 540 111 HOH HOH . F 5 HOH A 41 541 4 HOH HOH . F 5 HOH A 42 542 60 HOH HOH . F 5 HOH A 43 543 9 HOH HOH . F 5 HOH A 44 544 29 HOH HOH . F 5 HOH A 45 545 65 HOH HOH . F 5 HOH A 46 546 68 HOH HOH . F 5 HOH A 47 547 146 HOH HOH . F 5 HOH A 48 548 32 HOH HOH . F 5 HOH A 49 549 13 HOH HOH . F 5 HOH A 50 550 106 HOH HOH . F 5 HOH A 51 551 75 HOH HOH . F 5 HOH A 52 552 53 HOH HOH . F 5 HOH A 53 553 42 HOH HOH . F 5 HOH A 54 554 66 HOH HOH . F 5 HOH A 55 555 233 HOH HOH . F 5 HOH A 56 556 6 HOH HOH . F 5 HOH A 57 557 24 HOH HOH . F 5 HOH A 58 558 23 HOH HOH . F 5 HOH A 59 559 27 HOH HOH . F 5 HOH A 60 560 22 HOH HOH . F 5 HOH A 61 561 26 HOH HOH . F 5 HOH A 62 562 1 HOH HOH . F 5 HOH A 63 563 133 HOH HOH . F 5 HOH A 64 564 103 HOH HOH . F 5 HOH A 65 565 125 HOH HOH . F 5 HOH A 66 566 63 HOH HOH . F 5 HOH A 67 567 33 HOH HOH . F 5 HOH A 68 568 218 HOH HOH . F 5 HOH A 69 569 21 HOH HOH . F 5 HOH A 70 570 18 HOH HOH . F 5 HOH A 71 571 3 HOH HOH . F 5 HOH A 72 572 20 HOH HOH . F 5 HOH A 73 573 85 HOH HOH . F 5 HOH A 74 574 184 HOH HOH . F 5 HOH A 75 575 41 HOH HOH . F 5 HOH A 76 576 7 HOH HOH . F 5 HOH A 77 577 50 HOH HOH . F 5 HOH A 78 578 149 HOH HOH . F 5 HOH A 79 579 55 HOH HOH . F 5 HOH A 80 580 5 HOH HOH . F 5 HOH A 81 581 11 HOH HOH . F 5 HOH A 82 582 190 HOH HOH . F 5 HOH A 83 583 210 HOH HOH . F 5 HOH A 84 584 28 HOH HOH . F 5 HOH A 85 585 157 HOH HOH . F 5 HOH A 86 586 83 HOH HOH . F 5 HOH A 87 587 153 HOH HOH . F 5 HOH A 88 588 15 HOH HOH . F 5 HOH A 89 589 204 HOH HOH . F 5 HOH A 90 590 128 HOH HOH . F 5 HOH A 91 591 73 HOH HOH . F 5 HOH A 92 592 56 HOH HOH . F 5 HOH A 93 593 19 HOH HOH . F 5 HOH A 94 594 44 HOH HOH . F 5 HOH A 95 595 81 HOH HOH . F 5 HOH A 96 596 203 HOH HOH . F 5 HOH A 97 597 222 HOH HOH . F 5 HOH A 98 598 77 HOH HOH . F 5 HOH A 99 599 25 HOH HOH . F 5 HOH A 100 600 100 HOH HOH . F 5 HOH A 101 601 102 HOH HOH . F 5 HOH A 102 602 93 HOH HOH . F 5 HOH A 103 603 48 HOH HOH . F 5 HOH A 104 604 35 HOH HOH . F 5 HOH A 105 605 58 HOH HOH . F 5 HOH A 106 606 74 HOH HOH . F 5 HOH A 107 607 197 HOH HOH . F 5 HOH A 108 608 129 HOH HOH . F 5 HOH A 109 609 59 HOH HOH . F 5 HOH A 110 610 135 HOH HOH . F 5 HOH A 111 611 118 HOH HOH . F 5 HOH A 112 612 193 HOH HOH . F 5 HOH A 113 613 76 HOH HOH . F 5 HOH A 114 614 167 HOH HOH . F 5 HOH A 115 615 67 HOH HOH . F 5 HOH A 116 616 51 HOH HOH . F 5 HOH A 117 617 86 HOH HOH . F 5 HOH A 118 618 202 HOH HOH . F 5 HOH A 119 619 136 HOH HOH . F 5 HOH A 120 620 97 HOH HOH . F 5 HOH A 121 621 38 HOH HOH . F 5 HOH A 122 622 17 HOH HOH . F 5 HOH A 123 623 79 HOH HOH . F 5 HOH A 124 624 139 HOH HOH . F 5 HOH A 125 625 132 HOH HOH . F 5 HOH A 126 626 96 HOH HOH . F 5 HOH A 127 627 39 HOH HOH . F 5 HOH A 128 628 87 HOH HOH . F 5 HOH A 129 629 165 HOH HOH . F 5 HOH A 130 630 201 HOH HOH . F 5 HOH A 131 631 168 HOH HOH . F 5 HOH A 132 632 61 HOH HOH . F 5 HOH A 133 633 95 HOH HOH . F 5 HOH A 134 634 182 HOH HOH . F 5 HOH A 135 635 70 HOH HOH . F 5 HOH A 136 636 105 HOH HOH . F 5 HOH A 137 637 110 HOH HOH . F 5 HOH A 138 638 126 HOH HOH . F 5 HOH A 139 639 109 HOH HOH . F 5 HOH A 140 640 120 HOH HOH . F 5 HOH A 141 641 158 HOH HOH . F 5 HOH A 142 642 124 HOH HOH . F 5 HOH A 143 643 98 HOH HOH . F 5 HOH A 144 644 205 HOH HOH . F 5 HOH A 145 645 173 HOH HOH . F 5 HOH A 146 646 166 HOH HOH . F 5 HOH A 147 647 220 HOH HOH . F 5 HOH A 148 648 213 HOH HOH . F 5 HOH A 149 649 234 HOH HOH . F 5 HOH A 150 650 116 HOH HOH . F 5 HOH A 151 651 196 HOH HOH . F 5 HOH A 152 652 40 HOH HOH . F 5 HOH A 153 653 31 HOH HOH . F 5 HOH A 154 654 198 HOH HOH . F 5 HOH A 155 655 171 HOH HOH . F 5 HOH A 156 656 194 HOH HOH . F 5 HOH A 157 657 186 HOH HOH . F 5 HOH A 158 658 34 HOH HOH . F 5 HOH A 159 659 156 HOH HOH . F 5 HOH A 160 660 148 HOH HOH . F 5 HOH A 161 661 145 HOH HOH . F 5 HOH A 162 662 141 HOH HOH . F 5 HOH A 163 663 216 HOH HOH . F 5 HOH A 164 664 217 HOH HOH . F 5 HOH A 165 665 212 HOH HOH . F 5 HOH A 166 666 172 HOH HOH . F 5 HOH A 167 667 30 HOH HOH . F 5 HOH A 168 668 127 HOH HOH . F 5 HOH A 169 669 191 HOH HOH . F 5 HOH A 170 670 179 HOH HOH . F 5 HOH A 171 671 143 HOH HOH . F 5 HOH A 172 672 130 HOH HOH . F 5 HOH A 173 673 64 HOH HOH . F 5 HOH A 174 674 131 HOH HOH . F 5 HOH A 175 675 175 HOH HOH . F 5 HOH A 176 676 223 HOH HOH . F 5 HOH A 177 677 159 HOH HOH . F 5 HOH A 178 678 177 HOH HOH . F 5 HOH A 179 679 199 HOH HOH . F 5 HOH A 180 680 144 HOH HOH . F 5 HOH A 181 681 214 HOH HOH . F 5 HOH A 182 682 211 HOH HOH . F 5 HOH A 183 683 57 HOH HOH . F 5 HOH A 184 684 227 HOH HOH . F 5 HOH A 185 685 162 HOH HOH . F 5 HOH A 186 686 219 HOH HOH . F 5 HOH A 187 687 154 HOH HOH . F 5 HOH A 188 688 114 HOH HOH . F 5 HOH A 189 689 152 HOH HOH . F 5 HOH A 190 690 231 HOH HOH . F 5 HOH A 191 691 94 HOH HOH . F 5 HOH A 192 692 117 HOH HOH . F 5 HOH A 193 693 176 HOH HOH . F 5 HOH A 194 694 195 HOH HOH . F 5 HOH A 195 695 89 HOH HOH . F 5 HOH A 196 696 174 HOH HOH . F 5 HOH A 197 697 164 HOH HOH . F 5 HOH A 198 698 92 HOH HOH . F 5 HOH A 199 699 208 HOH HOH . F 5 HOH A 200 700 215 HOH HOH . F 5 HOH A 201 701 221 HOH HOH . F 5 HOH A 202 702 206 HOH HOH . F 5 HOH A 203 703 189 HOH HOH . F 5 HOH A 204 704 119 HOH HOH . F 5 HOH A 205 705 170 HOH HOH . F 5 HOH A 206 706 160 HOH HOH . F 5 HOH A 207 707 72 HOH HOH . F 5 HOH A 208 708 138 HOH HOH . F 5 HOH A 209 709 99 HOH HOH . F 5 HOH A 210 710 228 HOH HOH . F 5 HOH A 211 711 209 HOH HOH . F 5 HOH A 212 712 169 HOH HOH . F 5 HOH A 213 713 137 HOH HOH . F 5 HOH A 214 714 230 HOH HOH . F 5 HOH A 215 715 226 HOH HOH . F 5 HOH A 216 716 101 HOH HOH . F 5 HOH A 217 717 181 HOH HOH . F 5 HOH A 218 718 225 HOH HOH . F 5 HOH A 219 719 232 HOH HOH . G 5 HOH B 1 101 151 HOH HOH . G 5 HOH B 2 102 121 HOH HOH . G 5 HOH B 3 103 134 HOH HOH . G 5 HOH B 4 104 183 HOH HOH . G 5 HOH B 5 105 69 HOH HOH . G 5 HOH B 6 106 161 HOH HOH . G 5 HOH B 7 107 88 HOH HOH . G 5 HOH B 8 108 82 HOH HOH . G 5 HOH B 9 109 54 HOH HOH . G 5 HOH B 10 110 107 HOH HOH . G 5 HOH B 11 111 91 HOH HOH . G 5 HOH B 12 112 229 HOH HOH . G 5 HOH B 13 113 207 HOH HOH . G 5 HOH B 14 114 192 HOH HOH . G 5 HOH B 15 115 200 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x 204.385 _atom_site.Cartn_y -14.59 _atom_site.Cartn_z 25.669 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 91.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #