data_6JHN
#
_model_server_result.job_id            AMhh011aYT0dZVkxMIMqUA 
_model_server_result.datetime_utc      '2024-11-04 20:34:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jhn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":6002}' 
#
_entry.id    6JHN 
#
_exptl.entry_id    6JHN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              194.191 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            CAFFEINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JHN 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JHN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 K N N 
? 5 N N N 
? 5 Q N N 
? 5 T N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OE2 GLU 3923 A GLU 3923 1_555 J CA CA . A CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc2 A SG CYS 4889 A CYS 4889 1_555 I ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc3 A N CYS 4892 A CYS 4892 1_555 I ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc4 A SG CYS 4892 A CYS 4892 1_555 I ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? 
metalc ? metalc5 A ND1 HIS 4914 A HIS 4914 1_555 I ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? 
metalc ? metalc6 A NE2 HIS 4914 A HIS 4914 1_555 I ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc7 A O THR 4932 A THR 4932 1_555 J CA CA . A CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc8 C OE2 GLU 3923 C GLU 3923 1_555 M CA CA . C CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc9 C SG CYS 4889 C CYS 4889 1_555 L ZN ZN . C ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc10 C N CYS 4892 C CYS 4892 1_555 L ZN ZN . C ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc11 C SG CYS 4892 C CYS 4892 1_555 L ZN ZN . C ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc12 C ND1 HIS 4914 C HIS 4914 1_555 L ZN ZN . C ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.69 ? 
metalc ? metalc13 C NE2 HIS 4914 C HIS 4914 1_555 L ZN ZN . C ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? 
metalc ? metalc14 C O THR 4932 C THR 4932 1_555 M CA CA . C CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
metalc ? metalc15 E OE2 GLU 3923 E GLU 3923 1_555 P CA CA . E CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
metalc ? metalc16 E SG CYS 4889 E CYS 4889 1_555 O ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc17 E N CYS 4892 E CYS 4892 1_555 O ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc18 E SG CYS 4892 E CYS 4892 1_555 O ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc19 E ND1 HIS 4914 E HIS 4914 1_555 O ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? 
metalc ? metalc20 E NE2 HIS 4914 E HIS 4914 1_555 O ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? 
metalc ? metalc21 E O THR 4932 E THR 4932 1_555 P CA CA . E CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.497 ? 
metalc ? metalc22 G OE2 GLU 3923 G GLU 3923 1_555 S CA CA . G CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? 
metalc ? metalc23 G SG CYS 4889 G CYS 4889 1_555 R ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? 
metalc ? metalc24 G N CYS 4892 G CYS 4892 1_555 R ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? 
metalc ? metalc25 G SG CYS 4892 G CYS 4892 1_555 R ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.506 ? 
metalc ? metalc26 G ND1 HIS 4914 G HIS 4914 1_555 R ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? 
metalc ? metalc27 G NE2 HIS 4914 G HIS 4914 1_555 R ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? 
metalc ? metalc28 G O THR 4932 G THR 4932 1_555 S CA CA . G CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.496 ? 
#
_chem_comp.formula           'C8 H10 N4 O2' 
_chem_comp.formula_weight    194.191 
_chem_comp.id                CFF 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              CAFFEINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     3,7-DIHYDRO-1,3,7-TRIMETHYL-1H-PURINE-2,6-DIONE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 CFF sing 70 n y 
N1 C10 CFF sing 71 n n 
N1 C6 CFF sing 72 n y 
C2 N3 CFF sing 73 n y 
C2 O11 CFF doub 74 n n 
C10 H101 CFF sing 75 n n 
C10 H102 CFF sing 76 n n 
C10 H103 CFF sing 77 n n 
C6 C5 CFF sing 78 n y 
C6 O13 CFF doub 79 n n 
N3 C12 CFF sing 80 n n 
N3 C4 CFF sing 81 n y 
C12 H121 CFF sing 82 n n 
C12 H122 CFF sing 83 n n 
C12 H123 CFF sing 84 n n 
C4 C5 CFF doub 85 n y 
C4 N9 CFF sing 86 n y 
C5 N7 CFF sing 87 n y 
N9 C8 CFF doub 88 n y 
N7 C8 CFF sing 89 n y 
N7 C14 CFF sing 90 n n 
C8 H81 CFF sing 91 n n 
C14 H141 CFF sing 92 n n 
C14 H142 CFF sing 93 n n 
C14 H143 CFF sing 94 n n 
#
_atom_sites.entry_id                     6JHN 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 ZN A 1 6000 6000 ZN ZN . 
J 4 CA A 1 6001 6001 CA CA . 
K 5 CFF A 1 6002 6002 CFF CFF . 
L 3 ZN C 1 6000 6000 ZN ZN . 
M 4 CA C 1 6001 6001 CA CA . 
N 5 CFF C 1 6002 6002 CFF CFF . 
O 3 ZN E 1 6000 6000 ZN ZN . 
P 4 CA E 1 6001 6001 CA CA . 
Q 5 CFF E 1 6002 6002 CFF CFF . 
R 3 ZN G 1 6000 6000 ZN ZN . 
S 4 CA G 1 6001 6001 CA CA . 
T 5 CFF G 1 6002 6002 CFF CFF . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 CFF . . . Q 5 176.549 199.781 171.533 1 214.82 ? N1 CFF 6002 E 1 
HETATM 2 C C2 CFF . . . Q 5 177.522 199.104 170.914 1 214.82 ? C2 CFF 6002 E 1 
HETATM 3 C C10 CFF . . . Q 5 175.169 199.442 171.273 1 214.82 ? C10 CFF 6002 E 1 
HETATM 4 C C6 CFF . . . Q 5 176.852 200.732 172.38 1 214.82 ? C6 CFF 6002 E 1 
HETATM 5 N N3 CFF . . . Q 5 178.801 199.414 171.148 1 214.82 ? N3 CFF 6002 E 1 
HETATM 6 O O11 CFF . . . Q 5 177.245 198.263 170.14 1 214.82 ? O11 CFF 6002 E 1 
HETATM 7 C C12 CFF . . . Q 5 179.859 198.701 170.478 1 214.82 ? C12 CFF 6002 E 1 
HETATM 8 C C4 CFF . . . Q 5 179.115 200.368 172.009 1 214.82 ? C4 CFF 6002 E 1 
HETATM 9 C C5 CFF . . . Q 5 178.162 201.03 172.642 1 214.82 ? C5 CFF 6002 E 1 
HETATM 10 N N9 CFF . . . Q 5 180.295 200.833 172.399 1 214.82 ? N9 CFF 6002 E 1 
HETATM 11 O O13 CFF . . . Q 5 175.985 201.309 172.925 1 214.82 ? O13 CFF 6002 E 1 
HETATM 12 N N7 CFF . . . Q 5 178.756 201.931 173.424 1 214.82 ? N7 CFF 6002 E 1 
HETATM 13 C C8 CFF . . . Q 5 180.069 201.792 173.284 1 214.82 ? C8 CFF 6002 E 1 
HETATM 14 C C14 CFF . . . Q 5 178.429 202.966 174.385 1 214.82 ? C14 CFF 6002 E 1 
#
_model_server_stats.io_time_ms              43 
_model_server_stats.parse_time_ms           14 
_model_server_stats.create_model_time_ms    469 
_model_server_stats.query_time_ms           292 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           14 
#