data_6JIB
#
_model_server_result.job_id            fj4F3lRdZBhZN6sND70Epg 
_model_server_result.datetime_utc      '2025-01-11 22:10:38' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jib 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":405}' 
#
_entry.id    6JIB 
#
_exptl.entry_id    6JIB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6JIB 
_cell.length_a            116.424 
_cell.length_b            116.424 
_cell.length_c            113.178 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JIB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 F N N 
? 4 G N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 173 n n 
C1 C2 GOL sing 174 n n 
C1 H11 GOL sing 175 n n 
C1 H12 GOL sing 176 n n 
O1 HO1 GOL sing 177 n n 
C2 O2 GOL sing 178 n n 
C2 C3 GOL sing 179 n n 
C2 H2 GOL sing 180 n n 
O2 HO2 GOL sing 181 n n 
C3 O3 GOL sing 182 n n 
C3 H31 GOL sing 183 n n 
C3 H32 GOL sing 184 n n 
O3 HO3 GOL sing 185 n n 
#
_atom_sites.entry_id                     6JIB 
_atom_sites.fract_transf_matrix[1][1]    0.008589 
_atom_sites.fract_transf_matrix[1][2]    0.004959 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009918 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008836 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 BQF A 1 401 500 BQF CAU . 
D 3 PO4 A 1 402 501 PO4 PO4 . 
E 2 BQF A 1 403 502 BQF CAU . 
F 4 GOL A 1 404 504 GOL GOL . 
G 4 GOL A 1 405 505 GOL GOL . 
H 3 PO4 A 1 406 501 PO4 PO4 . 
I 2 BQF B 1 401 500 BQF CAU . 
J 2 BQF B 1 402 502 BQF CAU . 
K 4 GOL B 1 403 503 GOL GOL . 
L 4 GOL B 1 404 504 GOL GOL . 
M 4 GOL B 1 405 505 GOL GOL . 
N 5 HOH A 1 501 34 HOH HOH . 
N 5 HOH A 2 502 25 HOH HOH . 
N 5 HOH A 3 503 5 HOH HOH . 
N 5 HOH A 4 504 55 HOH HOH . 
N 5 HOH A 5 505 85 HOH HOH . 
N 5 HOH A 6 506 14 HOH HOH . 
N 5 HOH A 7 507 117 HOH HOH . 
N 5 HOH A 8 508 110 HOH HOH . 
N 5 HOH A 9 509 17 HOH HOH . 
N 5 HOH A 10 510 1 HOH HOH . 
N 5 HOH A 11 511 36 HOH HOH . 
N 5 HOH A 12 512 120 HOH HOH . 
N 5 HOH A 13 513 109 HOH HOH . 
N 5 HOH A 14 514 2 HOH HOH . 
N 5 HOH A 15 515 16 HOH HOH . 
N 5 HOH A 16 516 113 HOH HOH . 
N 5 HOH A 17 517 15 HOH HOH . 
N 5 HOH A 18 518 18 HOH HOH . 
N 5 HOH A 19 519 112 HOH HOH . 
N 5 HOH A 20 520 47 HOH HOH . 
N 5 HOH A 21 521 30 HOH HOH . 
N 5 HOH A 22 522 136 HOH HOH . 
N 5 HOH A 23 523 66 HOH HOH . 
N 5 HOH A 24 524 99 HOH HOH . 
N 5 HOH A 25 525 11 HOH HOH . 
N 5 HOH A 26 526 32 HOH HOH . 
N 5 HOH A 27 527 8 HOH HOH . 
N 5 HOH A 28 528 128 HOH HOH . 
N 5 HOH A 29 529 28 HOH HOH . 
N 5 HOH A 30 530 57 HOH HOH . 
N 5 HOH A 31 531 157 HOH HOH . 
N 5 HOH A 32 532 6 HOH HOH . 
N 5 HOH A 33 533 105 HOH HOH . 
N 5 HOH A 34 534 82 HOH HOH . 
N 5 HOH A 35 535 86 HOH HOH . 
N 5 HOH A 36 536 19 HOH HOH . 
N 5 HOH A 37 537 77 HOH HOH . 
N 5 HOH A 38 538 93 HOH HOH . 
N 5 HOH A 39 539 125 HOH HOH . 
N 5 HOH A 40 540 33 HOH HOH . 
N 5 HOH A 41 541 75 HOH HOH . 
N 5 HOH A 42 542 159 HOH HOH . 
N 5 HOH A 43 543 156 HOH HOH . 
N 5 HOH A 44 544 46 HOH HOH . 
N 5 HOH A 45 545 72 HOH HOH . 
N 5 HOH A 46 546 107 HOH HOH . 
N 5 HOH A 47 547 106 HOH HOH . 
N 5 HOH A 48 548 78 HOH HOH . 
N 5 HOH A 49 549 3 HOH HOH . 
N 5 HOH A 50 550 124 HOH HOH . 
N 5 HOH A 51 551 94 HOH HOH . 
N 5 HOH A 52 552 31 HOH HOH . 
N 5 HOH A 53 553 63 HOH HOH . 
N 5 HOH A 54 554 80 HOH HOH . 
N 5 HOH A 55 555 141 HOH HOH . 
N 5 HOH A 56 556 123 HOH HOH . 
N 5 HOH A 57 557 114 HOH HOH . 
N 5 HOH A 58 558 58 HOH HOH . 
N 5 HOH A 59 559 12 HOH HOH . 
N 5 HOH A 60 560 4 HOH HOH . 
N 5 HOH A 61 561 116 HOH HOH . 
N 5 HOH A 62 562 89 HOH HOH . 
N 5 HOH A 63 563 7 HOH HOH . 
N 5 HOH A 64 564 23 HOH HOH . 
N 5 HOH A 65 565 22 HOH HOH . 
N 5 HOH A 66 566 96 HOH HOH . 
N 5 HOH A 67 567 131 HOH HOH . 
N 5 HOH A 68 568 158 HOH HOH . 
N 5 HOH A 69 569 97 HOH HOH . 
N 5 HOH A 70 570 98 HOH HOH . 
N 5 HOH A 71 571 53 HOH HOH . 
N 5 HOH A 72 572 88 HOH HOH . 
N 5 HOH A 73 573 119 HOH HOH . 
N 5 HOH A 74 574 129 HOH HOH . 
N 5 HOH A 75 575 130 HOH HOH . 
N 5 HOH A 76 576 44 HOH HOH . 
N 5 HOH A 77 577 137 HOH HOH . 
N 5 HOH A 78 578 90 HOH HOH . 
N 5 HOH A 79 579 118 HOH HOH . 
O 5 HOH B 1 501 111 HOH HOH . 
O 5 HOH B 2 502 100 HOH HOH . 
O 5 HOH B 3 503 10 HOH HOH . 
O 5 HOH B 4 504 51 HOH HOH . 
O 5 HOH B 5 505 91 HOH HOH . 
O 5 HOH B 6 506 139 HOH HOH . 
O 5 HOH B 7 507 79 HOH HOH . 
O 5 HOH B 8 508 60 HOH HOH . 
O 5 HOH B 9 509 9 HOH HOH . 
O 5 HOH B 10 510 54 HOH HOH . 
O 5 HOH B 11 511 115 HOH HOH . 
O 5 HOH B 12 512 161 HOH HOH . 
O 5 HOH B 13 513 21 HOH HOH . 
O 5 HOH B 14 514 56 HOH HOH . 
O 5 HOH B 15 515 13 HOH HOH . 
O 5 HOH B 16 516 68 HOH HOH . 
O 5 HOH B 17 517 35 HOH HOH . 
O 5 HOH B 18 518 61 HOH HOH . 
O 5 HOH B 19 519 38 HOH HOH . 
O 5 HOH B 20 520 59 HOH HOH . 
O 5 HOH B 21 521 73 HOH HOH . 
O 5 HOH B 22 522 133 HOH HOH . 
O 5 HOH B 23 523 24 HOH HOH . 
O 5 HOH B 24 524 64 HOH HOH . 
O 5 HOH B 25 525 40 HOH HOH . 
O 5 HOH B 26 526 39 HOH HOH . 
O 5 HOH B 27 527 29 HOH HOH . 
O 5 HOH B 28 528 41 HOH HOH . 
O 5 HOH B 29 529 69 HOH HOH . 
O 5 HOH B 30 530 49 HOH HOH . 
O 5 HOH B 31 531 26 HOH HOH . 
O 5 HOH B 32 532 103 HOH HOH . 
O 5 HOH B 33 533 43 HOH HOH . 
O 5 HOH B 34 534 83 HOH HOH . 
O 5 HOH B 35 535 162 HOH HOH . 
O 5 HOH B 36 536 27 HOH HOH . 
O 5 HOH B 37 537 48 HOH HOH . 
O 5 HOH B 38 538 122 HOH HOH . 
O 5 HOH B 39 539 84 HOH HOH . 
O 5 HOH B 40 540 65 HOH HOH . 
O 5 HOH B 41 541 42 HOH HOH . 
O 5 HOH B 42 542 70 HOH HOH . 
O 5 HOH B 43 543 37 HOH HOH . 
O 5 HOH B 44 544 76 HOH HOH . 
O 5 HOH B 45 545 71 HOH HOH . 
O 5 HOH B 46 546 87 HOH HOH . 
O 5 HOH B 47 547 126 HOH HOH . 
O 5 HOH B 48 548 67 HOH HOH . 
O 5 HOH B 49 549 104 HOH HOH . 
O 5 HOH B 50 550 95 HOH HOH . 
O 5 HOH B 51 551 62 HOH HOH . 
O 5 HOH B 52 552 81 HOH HOH . 
O 5 HOH B 53 553 102 HOH HOH . 
O 5 HOH B 54 554 165 HOH HOH . 
O 5 HOH B 55 555 127 HOH HOH . 
O 5 HOH B 56 556 155 HOH HOH . 
O 5 HOH B 57 557 108 HOH HOH . 
O 5 HOH B 58 558 132 HOH HOH . 
O 5 HOH B 59 559 160 HOH HOH . 
O 5 HOH B 60 560 101 HOH HOH . 
O 5 HOH B 61 561 50 HOH HOH . 
O 5 HOH B 62 562 45 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . G 4 -57.039 19.21 -38.859 1 76.16 ? C1 GOL 405 A 1 
HETATM 2 O O1 GOL . . . G 4 -56.177 18.699 -37.847 1 71.54 ? O1 GOL 405 A 1 
HETATM 3 C C2 GOL . . . G 4 -58.209 18.275 -39.085 1 76 ? C2 GOL 405 A 1 
HETATM 4 O O2 GOL . . . G 4 -59.279 18.929 -39.766 1 110.42 ? O2 GOL 405 A 1 
HETATM 5 C C3 GOL . . . G 4 -57.794 17.039 -39.837 1 68.78 ? C3 GOL 405 A 1 
HETATM 6 O O3 GOL . . . G 4 -56.371 16.953 -39.866 1 65.64 ? O3 GOL 405 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           26 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#