data_6JID # _model_server_result.job_id RVYi47v0eF2e32S52Whwag _model_server_result.datetime_utc '2025-01-11 19:48:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jid # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6JID # _exptl.entry_id 6JID _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 422.457 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-(4-oxo-2-phenyl-1,5,7,8-tetrahydropyrido[4,3-d]pyrimidine-6(4H)-carbonyl)-1,3-dihydro-2H-2lambda~6~,1-benzothiazole-2,2-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6JID _cell.length_a 116.48 _cell.length_b 116.48 _cell.length_c 113.21 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JID _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # _chem_comp.formula 'C21 H18 N4 O4 S' _chem_comp.formula_weight 422.457 _chem_comp.id BQC _chem_comp.mon_nstd_flag . _chem_comp.name 5-(4-oxo-2-phenyl-1,5,7,8-tetrahydropyrido[4,3-d]pyrimidine-6(4H)-carbonyl)-1,3-dihydro-2H-2lambda~6~,1-benzothiazole-2,2-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C23 BQC doub 70 n y C18 C19 BQC sing 71 n y C23 C22 BQC sing 72 n y C19 C20 BQC doub 73 n y C22 C21 BQC doub 74 n y C20 C21 BQC sing 75 n y C21 C1 BQC sing 76 n n C1 N2 BQC doub 77 n n C1 N3 BQC sing 78 n n N2 C7 BQC sing 79 n n N3 C3 BQC sing 80 n n C7 O1 BQC doub 81 n n C7 C2 BQC sing 82 n n C3 C2 BQC doub 83 n n C3 C4 BQC sing 84 n n C2 C6 BQC sing 85 n n C4 C5 BQC sing 86 n n C6 N1 BQC sing 87 n n C5 N1 BQC sing 88 n n N1 C9 BQC sing 89 n n C17 C16 BQC sing 90 n n C17 S1 BQC sing 91 n n C14 C16 BQC doub 92 n y C14 C13 BQC sing 93 n y C9 O2 BQC doub 94 n n C9 C13 BQC sing 95 n n C16 C15 BQC sing 96 n y C13 C12 BQC doub 97 n y O4 S1 BQC doub 98 n n S1 O3 BQC doub 99 n n S1 N4 BQC sing 100 n n C15 N4 BQC sing 101 n n C15 C11 BQC doub 102 n y C12 C11 BQC sing 103 n y N4 H1 BQC sing 104 n n C11 H2 BQC sing 105 n n C17 H3 BQC sing 106 n n C17 H4 BQC sing 107 n n C14 H5 BQC sing 108 n n C12 H6 BQC sing 109 n n C5 H7 BQC sing 110 n n C5 H8 BQC sing 111 n n C4 H9 BQC sing 112 n n C4 H10 BQC sing 113 n n C6 H11 BQC sing 114 n n C6 H12 BQC sing 115 n n N3 H13 BQC sing 116 n n C20 H14 BQC sing 117 n n C19 H15 BQC sing 118 n n C22 H16 BQC sing 119 n n C23 H17 BQC sing 120 n n C18 H18 BQC sing 121 n n # _atom_sites.entry_id 6JID _atom_sites.fract_transf_matrix[1][1] 0.008585 _atom_sites.fract_transf_matrix[1][2] 0.004957 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009913 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BQC A 1 401 500 BQC PSL . D 3 PO4 A 1 402 501 PO4 PO4 . E 4 GOL A 1 403 504 GOL GOL . F 4 GOL B 1 401 503 GOL GOL . G 2 BQC B 1 402 500 BQC PSL . H 3 PO4 B 1 403 501 PO4 PO4 . I 4 GOL B 1 404 502 GOL GOL . J 5 HOH A 1 501 3 HOH HOH . J 5 HOH A 2 502 15 HOH HOH . J 5 HOH A 3 503 40 HOH HOH . J 5 HOH A 4 504 45 HOH HOH . J 5 HOH A 5 505 18 HOH HOH . J 5 HOH A 6 506 4 HOH HOH . J 5 HOH A 7 507 19 HOH HOH . J 5 HOH A 8 508 7 HOH HOH . J 5 HOH A 9 509 28 HOH HOH . J 5 HOH A 10 510 52 HOH HOH . J 5 HOH A 11 511 8 HOH HOH . J 5 HOH A 12 512 32 HOH HOH . J 5 HOH A 13 513 17 HOH HOH . J 5 HOH A 14 514 5 HOH HOH . J 5 HOH A 15 515 1 HOH HOH . J 5 HOH A 16 516 25 HOH HOH . J 5 HOH A 17 517 33 HOH HOH . J 5 HOH A 18 518 44 HOH HOH . J 5 HOH A 19 519 26 HOH HOH . J 5 HOH A 20 520 46 HOH HOH . J 5 HOH A 21 521 9 HOH HOH . J 5 HOH A 22 522 50 HOH HOH . J 5 HOH A 23 523 6 HOH HOH . K 5 HOH B 1 501 39 HOH HOH . K 5 HOH B 2 502 21 HOH HOH . K 5 HOH B 3 503 37 HOH HOH . K 5 HOH B 4 504 2 HOH HOH . K 5 HOH B 5 505 10 HOH HOH . K 5 HOH B 6 506 11 HOH HOH . K 5 HOH B 7 507 35 HOH HOH . K 5 HOH B 8 508 29 HOH HOH . K 5 HOH B 9 509 23 HOH HOH . K 5 HOH B 10 510 22 HOH HOH . K 5 HOH B 11 511 27 HOH HOH . K 5 HOH B 12 512 34 HOH HOH . K 5 HOH B 13 513 24 HOH HOH . K 5 HOH B 14 514 53 HOH HOH . K 5 HOH B 15 515 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 BQC . . . C 2 -67.478 32.54 -23.089 1 81.44 ? S1 BQC 401 A 1 HETATM 2 O O1 BQC . . . C 2 -58.719 27.843 -27.612 1 65.78 ? O1 BQC 401 A 1 HETATM 3 O O2 BQC . . . C 2 -60.61 29.857 -23.705 1 63.92 ? O2 BQC 401 A 1 HETATM 4 O O3 BQC . . . C 2 -68.595 31.566 -22.951 1 84.95 ? O3 BQC 401 A 1 HETATM 5 O O4 BQC . . . C 2 -67.712 33.987 -23.138 1 109.16 ? O4 BQC 401 A 1 HETATM 6 N N4 BQC . . . C 2 -66.337 32.233 -21.88 1 73.13 ? N4 BQC 401 A 1 HETATM 7 C C15 BQC . . . C 2 -65.184 31.619 -22.305 1 70.4 ? C15 BQC 401 A 1 HETATM 8 C C11 BQC . . . C 2 -64.119 31.197 -21.505 1 65.88 ? C11 BQC 401 A 1 HETATM 9 C C17 BQC . . . C 2 -66.38 31.911 -24.424 1 82.95 ? C17 BQC 401 A 1 HETATM 10 C C16 BQC . . . C 2 -65.148 31.408 -23.698 1 78.75 ? C16 BQC 401 A 1 HETATM 11 C C14 BQC . . . C 2 -64.024 30.792 -24.331 1 72.71 ? C14 BQC 401 A 1 HETATM 12 C C13 BQC . . . C 2 -62.935 30.359 -23.526 1 69.18 ? C13 BQC 401 A 1 HETATM 13 C C12 BQC . . . C 2 -62.997 30.601 -22.123 1 69.47 ? C12 BQC 401 A 1 HETATM 14 C C9 BQC . . . C 2 -61.778 29.596 -24.107 1 67.43 ? C9 BQC 401 A 1 HETATM 15 N N1 BQC . . . C 2 -61.994 28.666 -25.096 1 66.37 ? N1 BQC 401 A 1 HETATM 16 C C5 BQC . . . C 2 -63.269 28.042 -25.551 1 65.72 ? C5 BQC 401 A 1 HETATM 17 C C4 BQC . . . C 2 -63.534 28.365 -27.024 1 64.1 ? C4 BQC 401 A 1 HETATM 18 C C6 BQC . . . C 2 -60.783 28.266 -25.83 1 52.8 ? C6 BQC 401 A 1 HETATM 19 C C2 BQC . . . C 2 -61.045 28.101 -27.302 1 68 ? C2 BQC 401 A 1 HETATM 20 C C7 BQC . . . C 2 -59.852 27.871 -28.136 1 67.18 ? C7 BQC 401 A 1 HETATM 21 N N2 BQC . . . C 2 -60.093 27.734 -29.515 1 70.22 ? N2 BQC 401 A 1 HETATM 22 C C1 BQC . . . C 2 -61.329 27.774 -29.979 1 86.33 ? C1 BQC 401 A 1 HETATM 23 N N3 BQC . . . C 2 -62.484 27.963 -29.206 1 75.46 ? N3 BQC 401 A 1 HETATM 24 C C3 BQC . . . C 2 -62.293 28.145 -27.85 1 72.07 ? C3 BQC 401 A 1 HETATM 25 C C21 BQC . . . C 2 -61.566 27.53 -31.42 1 100.35 ? C21 BQC 401 A 1 HETATM 26 C C20 BQC . . . C 2 -62.591 26.548 -31.678 1 114.48 ? C20 BQC 401 A 1 HETATM 27 C C19 BQC . . . C 2 -62.932 26.167 -32.985 1 113.14 ? C19 BQC 401 A 1 HETATM 28 C C22 BQC . . . C 2 -60.814 28.135 -32.456 1 89.35 ? C22 BQC 401 A 1 HETATM 29 C C23 BQC . . . C 2 -61.172 27.769 -33.774 1 100.06 ? C23 BQC 401 A 1 HETATM 30 C C18 BQC . . . C 2 -62.199 26.8 -34.024 1 121.09 ? C18 BQC 401 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 110 _model_server_stats.create_model_time_ms 91 _model_server_stats.query_time_ms 376 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 30 #