data_6JIG
#
_model_server_result.job_id            s5jPZOYOQLgWsRc-gOdfWg 
_model_server_result.datetime_utc      '2024-10-20 01:28:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jig 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":601}' 
#
_entry.id    6JIG 
#
_exptl.entry_id    6JIG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              363.221 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "GUANOSINE-5'-MONOPHOSPHATE" 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JIG 
_cell.length_a            143.277 
_cell.length_b            143.277 
_cell.length_c            132.961 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JIG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    octameric 
_pdbx_struct_assembly.oligomeric_count      8 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3,4,5,6,7,8 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 
3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 
4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 
5 'crystal symmetry operation' 5_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 
6 'crystal symmetry operation' 6_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 
7 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 
8 'crystal symmetry operation' 8_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 313 A GLY 313 1_555 D K K . A K 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.811 ? 
metalc ? metalc2 A O GLY 315 A GLY 315 1_555 D K K . A K 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.674 ? 
metalc ? metalc3 A O ALA 318 A ALA 318 1_555 D K K . A K 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.704 ? 
metalc ? metalc4 A O GLU 482 A GLU 482 1_555 D K K . A K 603 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? 
metalc ? metalc5 A O SER 483 A SER 483 1_555 D K K . A K 603 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? 
metalc ? metalc6 A O GLY 484 A GLY 484 1_555 D K K . A K 603 4_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.774 ? 
#
_chem_comp.formula           'C10 H14 N5 O8 P' 
_chem_comp.formula_weight    363.221 
_chem_comp.id                5GP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "GUANOSINE-5'-MONOPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P O1P 5GP doub 1 n n 
P O2P 5GP sing 2 n n 
P O3P 5GP sing 3 n n 
P O5' 5GP sing 4 n n 
O2P HOP2 5GP sing 5 n n 
O3P HOP3 5GP sing 6 n n 
O5' C5' 5GP sing 7 n n 
C5' C4' 5GP sing 8 n n 
C5' "H5'1" 5GP sing 9 n n 
C5' "H5'2" 5GP sing 10 n n 
C4' O4' 5GP sing 11 n n 
C4' C3' 5GP sing 12 n n 
C4' H4' 5GP sing 13 n n 
O4' C1' 5GP sing 14 n n 
C3' O3' 5GP sing 15 n n 
C3' C2' 5GP sing 16 n n 
C3' H3' 5GP sing 17 n n 
O3' HO3' 5GP sing 18 n n 
C2' O2' 5GP sing 19 n n 
C2' C1' 5GP sing 20 n n 
C2' H2' 5GP sing 21 n n 
O2' HO2' 5GP sing 22 n n 
C1' N9 5GP sing 23 n n 
C1' H1' 5GP sing 24 n n 
N9 C8 5GP sing 25 n y 
N9 C4 5GP sing 26 n y 
C8 N7 5GP doub 27 n y 
C8 H8 5GP sing 28 n n 
N7 C5 5GP sing 29 n y 
C5 C6 5GP sing 30 n n 
C5 C4 5GP doub 31 n y 
C6 O6 5GP doub 32 n n 
C6 N1 5GP sing 33 n n 
N1 C2 5GP sing 34 n n 
N1 HN1 5GP sing 35 n n 
C2 N2 5GP sing 36 n n 
C2 N3 5GP doub 37 n n 
N2 HN21 5GP sing 38 n n 
N2 HN22 5GP sing 39 n n 
N3 C4 5GP sing 40 n n 
#
_atom_sites.entry_id                     6JIG 
_atom_sites.fract_transf_matrix[1][1]    0.006979 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006979 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007521 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 5GP A 1 601 1 5GP 5GP . 
C 2 5GP A 1 602 2 5GP 5GP . 
D 3 K A 1 603 1 K K . 
E 4 HOH A 1 701 88 HOH HOH . 
E 4 HOH A 2 702 56 HOH HOH . 
E 4 HOH A 3 703 52 HOH HOH . 
E 4 HOH A 4 704 10 HOH HOH . 
E 4 HOH A 5 705 32 HOH HOH . 
E 4 HOH A 6 706 4 HOH HOH . 
E 4 HOH A 7 707 90 HOH HOH . 
E 4 HOH A 8 708 80 HOH HOH . 
E 4 HOH A 9 709 24 HOH HOH . 
E 4 HOH A 10 710 97 HOH HOH . 
E 4 HOH A 11 711 85 HOH HOH . 
E 4 HOH A 12 712 34 HOH HOH . 
E 4 HOH A 13 713 63 HOH HOH . 
E 4 HOH A 14 714 60 HOH HOH . 
E 4 HOH A 15 715 58 HOH HOH . 
E 4 HOH A 16 716 23 HOH HOH . 
E 4 HOH A 17 717 12 HOH HOH . 
E 4 HOH A 18 718 16 HOH HOH . 
E 4 HOH A 19 719 33 HOH HOH . 
E 4 HOH A 20 720 57 HOH HOH . 
E 4 HOH A 21 721 47 HOH HOH . 
E 4 HOH A 22 722 70 HOH HOH . 
E 4 HOH A 23 723 62 HOH HOH . 
E 4 HOH A 24 724 9 HOH HOH . 
E 4 HOH A 25 725 2 HOH HOH . 
E 4 HOH A 26 726 3 HOH HOH . 
E 4 HOH A 27 727 45 HOH HOH . 
E 4 HOH A 28 728 53 HOH HOH . 
E 4 HOH A 29 729 11 HOH HOH . 
E 4 HOH A 30 730 92 HOH HOH . 
E 4 HOH A 31 731 20 HOH HOH . 
E 4 HOH A 32 732 28 HOH HOH . 
E 4 HOH A 33 733 78 HOH HOH . 
E 4 HOH A 34 734 55 HOH HOH . 
E 4 HOH A 35 735 38 HOH HOH . 
E 4 HOH A 36 736 69 HOH HOH . 
E 4 HOH A 37 737 73 HOH HOH . 
E 4 HOH A 38 738 7 HOH HOH . 
E 4 HOH A 39 739 59 HOH HOH . 
E 4 HOH A 40 740 77 HOH HOH . 
E 4 HOH A 41 741 36 HOH HOH . 
E 4 HOH A 42 742 94 HOH HOH . 
E 4 HOH A 43 743 18 HOH HOH . 
E 4 HOH A 44 744 81 HOH HOH . 
E 4 HOH A 45 745 6 HOH HOH . 
E 4 HOH A 46 746 51 HOH HOH . 
E 4 HOH A 47 747 37 HOH HOH . 
E 4 HOH A 48 748 13 HOH HOH . 
E 4 HOH A 49 749 54 HOH HOH . 
E 4 HOH A 50 750 22 HOH HOH . 
E 4 HOH A 51 751 31 HOH HOH . 
E 4 HOH A 52 752 74 HOH HOH . 
E 4 HOH A 53 753 26 HOH HOH . 
E 4 HOH A 54 754 72 HOH HOH . 
E 4 HOH A 55 755 8 HOH HOH . 
E 4 HOH A 56 756 95 HOH HOH . 
E 4 HOH A 57 757 91 HOH HOH . 
E 4 HOH A 58 758 1 HOH HOH . 
E 4 HOH A 59 759 39 HOH HOH . 
E 4 HOH A 60 760 64 HOH HOH . 
E 4 HOH A 61 761 46 HOH HOH . 
E 4 HOH A 62 762 61 HOH HOH . 
E 4 HOH A 63 763 79 HOH HOH . 
E 4 HOH A 64 764 21 HOH HOH . 
E 4 HOH A 65 765 5 HOH HOH . 
E 4 HOH A 66 766 68 HOH HOH . 
E 4 HOH A 67 767 49 HOH HOH . 
E 4 HOH A 68 768 48 HOH HOH . 
E 4 HOH A 69 769 75 HOH HOH . 
E 4 HOH A 70 770 41 HOH HOH . 
E 4 HOH A 71 771 93 HOH HOH . 
E 4 HOH A 72 772 35 HOH HOH . 
E 4 HOH A 73 773 25 HOH HOH . 
E 4 HOH A 74 774 30 HOH HOH . 
E 4 HOH A 75 775 44 HOH HOH . 
E 4 HOH A 76 776 50 HOH HOH . 
E 4 HOH A 77 777 27 HOH HOH . 
E 4 HOH A 78 778 89 HOH HOH . 
E 4 HOH A 79 779 29 HOH HOH . 
E 4 HOH A 80 780 99 HOH HOH . 
E 4 HOH A 81 781 67 HOH HOH . 
E 4 HOH A 82 782 76 HOH HOH . 
E 4 HOH A 83 783 65 HOH HOH . 
E 4 HOH A 84 784 15 HOH HOH . 
E 4 HOH A 85 785 43 HOH HOH . 
E 4 HOH A 86 786 66 HOH HOH . 
E 4 HOH A 87 787 42 HOH HOH . 
E 4 HOH A 88 788 14 HOH HOH . 
E 4 HOH A 89 789 40 HOH HOH . 
E 4 HOH A 90 790 86 HOH HOH . 
E 4 HOH A 91 791 82 HOH HOH . 
E 4 HOH A 92 792 96 HOH HOH . 
E 4 HOH A 93 793 83 HOH HOH . 
E 4 HOH A 94 794 98 HOH HOH . 
E 4 HOH A 95 795 100 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P 5GP . . . B 2 7.992 21.005 -18.249 1 39.22 ? P 5GP 601 A 1 
HETATM 2 O O1P 5GP . . . B 2 7.402 19.676 -18.691 1 38.83 ? O1P 5GP 601 A 1 
HETATM 3 O O2P 5GP . . . B 2 7.69 21.351 -16.805 1 39.72 ? O2P 5GP 601 A 1 
HETATM 4 O O3P 5GP . . . B 2 9.433 21.207 -18.646 1 38.41 ? O3P 5GP 601 A 1 
HETATM 5 O O5' 5GP . . . B 2 7.2 22.032 -19.18 1 39.27 ? O5' 5GP 601 A 1 
HETATM 6 C C5' 5GP . . . B 2 7.203 23.434 -18.958 1 38.25 ? C5' 5GP 601 A 1 
HETATM 7 C C4' 5GP . . . B 2 6.372 24.144 -20.007 1 37.98 ? C4' 5GP 601 A 1 
HETATM 8 O O4' 5GP . . . B 2 4.968 23.895 -19.763 1 40.93 ? O4' 5GP 601 A 1 
HETATM 9 C C3' 5GP . . . B 2 6.457 25.665 -20.021 1 38.54 ? C3' 5GP 601 A 1 
HETATM 10 O O3' 5GP . . . B 2 7.638 26.157 -20.643 1 36.04 ? O3' 5GP 601 A 1 
HETATM 11 C C2' 5GP . . . B 2 5.15 26.074 -20.723 1 40.55 ? C2' 5GP 601 A 1 
HETATM 12 O O2' 5GP . . . B 2 5.262 26.016 -22.139 1 41.32 ? O2' 5GP 601 A 1 
HETATM 13 C C1' 5GP . . . B 2 4.198 24.948 -20.311 1 40.9 ? C1' 5GP 601 A 1 
HETATM 14 N N9 5GP . . . B 2 3.226 25.374 -19.298 1 45.05 ? N9 5GP 601 A 1 
HETATM 15 C C8 5GP . . . B 2 3.479 25.947 -18.111 1 46.66 ? C8 5GP 601 A 1 
HETATM 16 N N7 5GP . . . B 2 2.291 26.148 -17.483 1 48.87 ? N7 5GP 601 A 1 
HETATM 17 C C5 5GP . . . B 2 1.314 25.669 -18.291 1 49.64 ? C5 5GP 601 A 1 
HETATM 18 C C6 5GP . . . B 2 -0.068 25.585 -18.191 1 50.31 ? C6 5GP 601 A 1 
HETATM 19 O O6 5GP . . . B 2 -0.635 26.005 -17.161 1 50.91 ? O6 5GP 601 A 1 
HETATM 20 N N1 5GP . . . B 2 -0.772 25.051 -19.202 1 47.19 ? N1 5GP 601 A 1 
HETATM 21 C C2 5GP . . . B 2 -0.17 24.593 -20.309 1 47.37 ? C2 5GP 601 A 1 
HETATM 22 N N2 5GP . . . B 2 -0.905 24.056 -21.309 1 45.84 ? N2 5GP 601 A 1 
HETATM 23 N N3 5GP . . . B 2 1.178 24.646 -20.435 1 43.14 ? N3 5GP 601 A 1 
HETATM 24 C C4 5GP . . . B 2 1.916 25.182 -19.435 1 44.07 ? C4 5GP 601 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           265 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           24 
#