data_6JIU # _model_server_result.job_id -9lUrP2dRfTp1BUQVzgl6w _model_server_result.datetime_utc '2024-12-26 22:39:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jiu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"IA","auth_seq_id":201}' # _entry.id 6JIU # _exptl.entry_id 6JIU _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 40.078 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JIU _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JIU _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dodecameric _pdbx_struct_assembly.oligomeric_count 12 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 N N N ? 5 Q N N ? 5 R N N ? 5 T N N ? 5 W N N ? 5 X N N ? 5 Z N N ? 5 CA N N ? 5 DA N N ? 5 FA N N ? 5 IA N N ? 5 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 3849 A GLU 3849 1_555 N CA CA . A CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc2 A OE1 GLU 3923 A GLU 3923 1_555 N CA CA . A CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc3 A OE2 GLU 3923 A GLU 3923 1_555 N CA CA . A CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc4 A SG CYS 4889 A CYS 4889 1_555 M ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc5 A N CYS 4892 A CYS 4892 1_555 M ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc6 A SG CYS 4892 A CYS 4892 1_555 M ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc7 A ND1 HIS 4914 A HIS 4914 1_555 M ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc8 A NE2 HIS 4914 A HIS 4914 1_555 M ZN ZN . A ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc9 A O THR 4932 A THR 4932 1_555 N CA CA . A CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc10 C O THR 27 C THR 27 1_555 Q CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc11 C OE2 GLU 32 C GLU 32 1_555 Q CA CA . C CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc12 D OE2 GLU 3849 D GLU 3849 1_555 T CA CA . D CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc13 D OE1 GLU 3923 D GLU 3923 1_555 T CA CA . D CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.964 ? metalc ? metalc14 D OE2 GLU 3923 D GLU 3923 1_555 T CA CA . D CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc15 D SG CYS 4889 D CYS 4889 1_555 S ZN ZN . D ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc16 D N CYS 4892 D CYS 4892 1_555 S ZN ZN . D ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc17 D SG CYS 4892 D CYS 4892 1_555 S ZN ZN . D ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc18 D ND1 HIS 4914 D HIS 4914 1_555 S ZN ZN . D ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc19 D NE2 HIS 4914 D HIS 4914 1_555 S ZN ZN . D ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc20 D O THR 4932 D THR 4932 1_555 T CA CA . D CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc21 F O THR 27 F THR 27 1_555 W CA CA . F CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc22 F OE2 GLU 32 F GLU 32 1_555 W CA CA . F CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc23 G OE2 GLU 3849 G GLU 3849 1_555 Z CA CA . G CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc24 G OE1 GLU 3923 G GLU 3923 1_555 Z CA CA . G CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc25 G OE2 GLU 3923 G GLU 3923 1_555 Z CA CA . G CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc26 G SG CYS 4889 G CYS 4889 1_555 Y ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc27 G N CYS 4892 G CYS 4892 1_555 Y ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc28 G SG CYS 4892 G CYS 4892 1_555 Y ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc29 G ND1 HIS 4914 G HIS 4914 1_555 Y ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc30 G NE2 HIS 4914 G HIS 4914 1_555 Y ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc31 G O THR 4932 G THR 4932 1_555 Z CA CA . G CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc32 I O THR 27 I THR 27 1_555 CA CA CA . I CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc33 I OE2 GLU 32 I GLU 32 1_555 CA CA CA . I CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? metalc ? metalc34 J OE2 GLU 3849 J GLU 3849 1_555 FA CA CA . J CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc35 J OE1 GLU 3923 J GLU 3923 1_555 FA CA CA . J CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.965 ? metalc ? metalc36 J OE2 GLU 3923 J GLU 3923 1_555 FA CA CA . J CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.486 ? metalc ? metalc37 J SG CYS 4889 J CYS 4889 1_555 EA ZN ZN . J ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.909 ? metalc ? metalc38 J N CYS 4892 J CYS 4892 1_555 EA ZN ZN . J ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc39 J SG CYS 4892 J CYS 4892 1_555 EA ZN ZN . J ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.694 ? metalc ? metalc40 J ND1 HIS 4914 J HIS 4914 1_555 EA ZN ZN . J ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc41 J NE2 HIS 4914 J HIS 4914 1_555 EA ZN ZN . J ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc42 J O THR 4932 J THR 4932 1_555 FA CA CA . J CA 6001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.504 ? metalc ? metalc43 L O THR 27 L THR 27 1_555 IA CA CA . L CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.549 ? metalc ? metalc44 L OE2 GLU 32 L GLU 32 1_555 IA CA CA . L CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.558 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JIU _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code M 4 ZN A 1 6000 6000 ZN ZN . N 5 CA A 1 6001 6001 CA CA . O 6 ATP A 1 6002 6002 ATP ATP . P 7 CFF A 1 6003 6003 CFF CFF . Q 5 CA C 1 201 149 CA CA . R 5 CA C 1 202 150 CA CA . S 4 ZN D 1 6000 6000 ZN ZN . T 5 CA D 1 6001 6001 CA CA . U 6 ATP D 1 6002 6002 ATP ATP . V 7 CFF D 1 6003 6003 CFF CFF . W 5 CA F 1 201 149 CA CA . X 5 CA F 1 202 150 CA CA . Y 4 ZN G 1 6000 6000 ZN ZN . Z 5 CA G 1 6001 6001 CA CA . AA 6 ATP G 1 6002 6002 ATP ATP . BA 7 CFF G 1 6003 6003 CFF CFF . CA 5 CA I 1 201 149 CA CA . DA 5 CA I 1 202 150 CA CA . EA 4 ZN J 1 6000 6000 ZN ZN . FA 5 CA J 1 6001 6001 CA CA . GA 6 ATP J 1 6002 6002 ATP ATP . HA 7 CFF J 1 6003 6003 CFF CFF . IA 5 CA L 1 201 149 CA CA . JA 5 CA L 1 202 150 CA CA . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id IA _atom_site.label_entity_id 5 _atom_site.Cartn_x 187.401 _atom_site.Cartn_y 331.414 _atom_site.Cartn_z 268.789 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 631.38 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id L _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 155 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #