data_6JLF # _model_server_result.job_id QOXlRz7TmsxmYk7y82_1Lw _model_server_result.datetime_utc '2025-03-13 17:54:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jlf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":301}' # _entry.id 6JLF # _exptl.entry_id 6JLF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JLF _cell.length_a 113.97 _cell.length_b 159.468 _cell.length_c 161.901 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JLF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details pentameric _pdbx_struct_assembly.oligomeric_count 5 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N ? 2 M N N ? 2 N N N ? 2 O N N ? 2 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 111 A HIS 108 1_555 H ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc2 A ND1 HIS 114 A HIS 111 1_555 H ZN ZN . A ZN 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc3 A OE1 GLU 194 A GLU 191 1_555 F ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc4 A OE2 GLU 194 A GLU 191 1_555 F ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc5 A NE2 HIS 197 A HIS 194 1_555 G ZN ZN . A ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.998 ? metalc ? metalc6 F ZN ZN . A ZN 301 1_555 Q O HOH . A HOH 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? metalc ? metalc7 F ZN ZN . A ZN 301 1_555 E NE2 HIS 197 E HIS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc8 F ZN ZN . A ZN 301 1_555 U O HOH . E HOH 418 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc9 G ZN ZN . A ZN 302 1_555 B OE1 GLU 194 B GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.678 ? metalc ? metalc10 G ZN ZN . A ZN 302 1_555 B OE2 GLU 194 B GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc11 G ZN ZN . A ZN 302 1_555 R O HOH . B HOH 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc12 G ZN ZN . A ZN 302 1_555 R O HOH . B HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? metalc ? metalc13 H ZN ZN . A ZN 303 1_555 Q O HOH . A HOH 408 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.959 ? metalc ? metalc14 B ND1 HIS 111 B HIS 108 1_555 J ZN ZN . B ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc15 B OD2 ASP 112 B ASP 109 1_555 M ZN ZN . D ZN 301 2_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? metalc ? metalc16 B NE2 HIS 197 B HIS 194 1_555 I ZN ZN . B ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.009 ? metalc ? metalc17 I ZN ZN . B ZN 301 1_555 R O HOH . B HOH 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? metalc ? metalc18 I ZN ZN . B ZN 301 1_555 D OE1 GLU 194 D GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc19 I ZN ZN . B ZN 301 1_555 D OE2 GLU 194 D GLU 191 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? metalc ? metalc20 I ZN ZN . B ZN 301 1_555 T O HOH . D HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? metalc ? metalc21 C ND1 HIS 111 C HIS 108 1_555 K ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc22 C ND1 HIS 114 C HIS 111 1_555 K ZN ZN . C ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc23 C OE1 GLU 194 C GLU 191 1_555 L ZN ZN . C ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc24 L ZN ZN . C ZN 302 1_555 D NE2 HIS 197 D HIS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.089 ? metalc ? metalc25 D ND1 HIS 111 D HIS 108 1_555 N ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.135 ? metalc ? metalc26 D ND1 HIS 114 D HIS 111 1_555 N ZN ZN . D ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc27 E ND1 HIS 111 E HIS 108 1_555 P ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc28 E ND1 HIS 114 E HIS 111 1_555 P ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc29 E NH1 ARG 115 E ARG 112 1_555 P ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.571 ? metalc ? metalc30 E NH2 ARG 115 E ARG 112 1_555 P ZN ZN . E ZN 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.407 ? metalc ? metalc31 E OE1 GLU 194 E GLU 191 1_555 O ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.448 ? metalc ? metalc32 E OE2 GLU 194 E GLU 191 1_555 O ZN ZN . E ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc33 O ZN ZN . E ZN 301 1_555 U O HOH . E HOH 413 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc34 O ZN ZN . E ZN 301 1_555 U O HOH . E HOH 417 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.819 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JLF _atom_sites.fract_transf_matrix[1][1] 0.008774 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006271 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006177 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 ZN A 1 301 301 ZN ZN . G 2 ZN A 1 302 302 ZN ZN . H 2 ZN A 1 303 303 ZN ZN . I 2 ZN B 1 301 302 ZN ZN . J 2 ZN B 1 302 303 ZN ZN . K 2 ZN C 1 301 303 ZN ZN . L 2 ZN C 1 302 302 ZN ZN . M 2 ZN D 1 301 301 ZN ZN . N 2 ZN D 1 302 301 ZN ZN . O 2 ZN E 1 301 301 ZN ZN . P 2 ZN E 1 302 301 ZN ZN . Q 3 HOH A 1 401 12 HOH HOH . Q 3 HOH A 2 402 26 HOH HOH . Q 3 HOH A 3 403 55 HOH HOH . Q 3 HOH A 4 404 52 HOH HOH . Q 3 HOH A 5 405 46 HOH HOH . Q 3 HOH A 6 406 13 HOH HOH . Q 3 HOH A 7 407 2 HOH HOH . Q 3 HOH A 8 408 5 HOH HOH . Q 3 HOH A 9 409 35 HOH HOH . Q 3 HOH A 10 410 43 HOH HOH . R 3 HOH B 1 401 51 HOH HOH . R 3 HOH B 2 402 20 HOH HOH . R 3 HOH B 3 403 4 HOH HOH . R 3 HOH B 4 404 42 HOH HOH . R 3 HOH B 5 405 3 HOH HOH . S 3 HOH C 1 401 27 HOH HOH . S 3 HOH C 2 402 53 HOH HOH . S 3 HOH C 3 403 37 HOH HOH . S 3 HOH C 4 404 30 HOH HOH . S 3 HOH C 5 405 54 HOH HOH . S 3 HOH C 6 406 44 HOH HOH . S 3 HOH C 7 407 32 HOH HOH . S 3 HOH C 8 408 9 HOH HOH . S 3 HOH C 9 409 45 HOH HOH . T 3 HOH D 1 401 11 HOH HOH . T 3 HOH D 2 402 17 HOH HOH . T 3 HOH D 3 403 47 HOH HOH . T 3 HOH D 4 404 15 HOH HOH . T 3 HOH D 5 405 21 HOH HOH . T 3 HOH D 6 406 23 HOH HOH . T 3 HOH D 7 407 31 HOH HOH . T 3 HOH D 8 408 34 HOH HOH . T 3 HOH D 9 409 10 HOH HOH . T 3 HOH D 10 410 6 HOH HOH . U 3 HOH E 1 401 38 HOH HOH . U 3 HOH E 2 402 33 HOH HOH . U 3 HOH E 3 403 16 HOH HOH . U 3 HOH E 4 404 28 HOH HOH . U 3 HOH E 5 405 25 HOH HOH . U 3 HOH E 6 406 49 HOH HOH . U 3 HOH E 7 407 29 HOH HOH . U 3 HOH E 8 408 41 HOH HOH . U 3 HOH E 9 409 22 HOH HOH . U 3 HOH E 10 410 24 HOH HOH . U 3 HOH E 11 411 18 HOH HOH . U 3 HOH E 12 412 48 HOH HOH . U 3 HOH E 13 413 8 HOH HOH . U 3 HOH E 14 414 50 HOH HOH . U 3 HOH E 15 415 14 HOH HOH . U 3 HOH E 16 416 40 HOH HOH . U 3 HOH E 17 417 7 HOH HOH . U 3 HOH E 18 418 1 HOH HOH . U 3 HOH E 19 419 36 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id M _atom_site.label_entity_id 2 _atom_site.Cartn_x 43.899 _atom_site.Cartn_y 14.713 _atom_site.Cartn_z -35.433 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 149.18 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 301 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #