data_6JMK # _model_server_result.job_id Dz-MqwFBoTIDoAl14eElcA _model_server_result.datetime_utc '2024-12-06 23:57:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jmk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":203}' # _entry.id 6JMK # _exptl.entry_id 6JMK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JMK _cell.length_a 54.712 _cell.length_b 58.428 _cell.length_c 126.025 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JMK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,G 1 1 B,D,E,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 70 n n C1 C2 EDO sing 71 n n C1 H11 EDO sing 72 n n C1 H12 EDO sing 73 n n O1 HO1 EDO sing 74 n n C2 O2 EDO sing 75 n n C2 H21 EDO sing 76 n n C2 H22 EDO sing 77 n n O2 HO2 EDO sing 78 n n # _atom_sites.entry_id 6JMK _atom_sites.fract_transf_matrix[1][1] 0.018278 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017115 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007935 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 201 4 GOL GOL . D 2 GOL B 1 201 2 GOL GOL . E 2 GOL B 1 202 5 GOL GOL . F 3 EDO B 1 203 3 EDO EDO . G 4 HOH A 1 301 96 HOH HOH . G 4 HOH A 2 302 208 HOH HOH . G 4 HOH A 3 303 227 HOH HOH . G 4 HOH A 4 304 120 HOH HOH . G 4 HOH A 5 305 126 HOH HOH . G 4 HOH A 6 306 221 HOH HOH . G 4 HOH A 7 307 249 HOH HOH . G 4 HOH A 8 308 224 HOH HOH . G 4 HOH A 9 309 60 HOH HOH . G 4 HOH A 10 310 42 HOH HOH . G 4 HOH A 11 311 36 HOH HOH . G 4 HOH A 12 312 100 HOH HOH . G 4 HOH A 13 313 89 HOH HOH . G 4 HOH A 14 314 41 HOH HOH . G 4 HOH A 15 315 51 HOH HOH . G 4 HOH A 16 316 113 HOH HOH . G 4 HOH A 17 317 146 HOH HOH . G 4 HOH A 18 318 69 HOH HOH . G 4 HOH A 19 319 223 HOH HOH . G 4 HOH A 20 320 130 HOH HOH . G 4 HOH A 21 321 3 HOH HOH . G 4 HOH A 22 322 118 HOH HOH . G 4 HOH A 23 323 143 HOH HOH . G 4 HOH A 24 324 190 HOH HOH . G 4 HOH A 25 325 192 HOH HOH . G 4 HOH A 26 326 27 HOH HOH . G 4 HOH A 27 327 87 HOH HOH . G 4 HOH A 28 328 233 HOH HOH . G 4 HOH A 29 329 37 HOH HOH . G 4 HOH A 30 330 2 HOH HOH . G 4 HOH A 31 331 84 HOH HOH . G 4 HOH A 32 332 58 HOH HOH . G 4 HOH A 33 333 116 HOH HOH . G 4 HOH A 34 334 127 HOH HOH . G 4 HOH A 35 335 14 HOH HOH . G 4 HOH A 36 336 119 HOH HOH . G 4 HOH A 37 337 95 HOH HOH . G 4 HOH A 38 338 22 HOH HOH . G 4 HOH A 39 339 70 HOH HOH . G 4 HOH A 40 340 30 HOH HOH . G 4 HOH A 41 341 98 HOH HOH . G 4 HOH A 42 342 218 HOH HOH . G 4 HOH A 43 343 6 HOH HOH . G 4 HOH A 44 344 114 HOH HOH . G 4 HOH A 45 345 219 HOH HOH . G 4 HOH A 46 346 180 HOH HOH . G 4 HOH A 47 347 220 HOH HOH . G 4 HOH A 48 348 10 HOH HOH . G 4 HOH A 49 349 66 HOH HOH . G 4 HOH A 50 350 241 HOH HOH . G 4 HOH A 51 351 179 HOH HOH . G 4 HOH A 52 352 81 HOH HOH . G 4 HOH A 53 353 199 HOH HOH . G 4 HOH A 54 354 101 HOH HOH . G 4 HOH A 55 355 74 HOH HOH . G 4 HOH A 56 356 88 HOH HOH . G 4 HOH A 57 357 54 HOH HOH . G 4 HOH A 58 358 11 HOH HOH . G 4 HOH A 59 359 13 HOH HOH . G 4 HOH A 60 360 23 HOH HOH . G 4 HOH A 61 361 43 HOH HOH . G 4 HOH A 62 362 144 HOH HOH . G 4 HOH A 63 363 8 HOH HOH . G 4 HOH A 64 364 170 HOH HOH . G 4 HOH A 65 365 18 HOH HOH . G 4 HOH A 66 366 38 HOH HOH . G 4 HOH A 67 367 57 HOH HOH . G 4 HOH A 68 368 35 HOH HOH . G 4 HOH A 69 369 53 HOH HOH . G 4 HOH A 70 370 173 HOH HOH . G 4 HOH A 71 371 85 HOH HOH . G 4 HOH A 72 372 209 HOH HOH . G 4 HOH A 73 373 198 HOH HOH . G 4 HOH A 74 374 183 HOH HOH . G 4 HOH A 75 375 229 HOH HOH . G 4 HOH A 76 376 61 HOH HOH . G 4 HOH A 77 377 253 HOH HOH . G 4 HOH A 78 378 92 HOH HOH . G 4 HOH A 79 379 99 HOH HOH . G 4 HOH A 80 380 112 HOH HOH . G 4 HOH A 81 381 123 HOH HOH . G 4 HOH A 82 382 105 HOH HOH . G 4 HOH A 83 383 228 HOH HOH . G 4 HOH A 84 384 108 HOH HOH . G 4 HOH A 85 385 164 HOH HOH . G 4 HOH A 86 386 256 HOH HOH . G 4 HOH A 87 387 172 HOH HOH . G 4 HOH A 88 388 213 HOH HOH . G 4 HOH A 89 389 205 HOH HOH . G 4 HOH A 90 390 175 HOH HOH . G 4 HOH A 91 391 156 HOH HOH . G 4 HOH A 92 392 216 HOH HOH . G 4 HOH A 93 393 117 HOH HOH . G 4 HOH A 94 394 91 HOH HOH . G 4 HOH A 95 395 65 HOH HOH . G 4 HOH A 96 396 73 HOH HOH . G 4 HOH A 97 397 251 HOH HOH . G 4 HOH A 98 398 135 HOH HOH . G 4 HOH A 99 399 103 HOH HOH . G 4 HOH A 100 400 31 HOH HOH . G 4 HOH A 101 401 255 HOH HOH . G 4 HOH A 102 402 160 HOH HOH . G 4 HOH A 103 403 231 HOH HOH . G 4 HOH A 104 404 154 HOH HOH . G 4 HOH A 105 405 185 HOH HOH . G 4 HOH A 106 406 232 HOH HOH . G 4 HOH A 107 407 157 HOH HOH . G 4 HOH A 108 408 177 HOH HOH . G 4 HOH A 109 409 124 HOH HOH . G 4 HOH A 110 410 212 HOH HOH . H 4 HOH B 1 301 238 HOH HOH . H 4 HOH B 2 302 244 HOH HOH . H 4 HOH B 3 303 243 HOH HOH . H 4 HOH B 4 304 240 HOH HOH . H 4 HOH B 5 305 246 HOH HOH . H 4 HOH B 6 306 80 HOH HOH . H 4 HOH B 7 307 83 HOH HOH . H 4 HOH B 8 308 72 HOH HOH . H 4 HOH B 9 309 138 HOH HOH . H 4 HOH B 10 310 128 HOH HOH . H 4 HOH B 11 311 45 HOH HOH . H 4 HOH B 12 312 236 HOH HOH . H 4 HOH B 13 313 75 HOH HOH . H 4 HOH B 14 314 214 HOH HOH . H 4 HOH B 15 315 200 HOH HOH . H 4 HOH B 16 316 234 HOH HOH . H 4 HOH B 17 317 4 HOH HOH . H 4 HOH B 18 318 134 HOH HOH . H 4 HOH B 19 319 188 HOH HOH . H 4 HOH B 20 320 79 HOH HOH . H 4 HOH B 21 321 50 HOH HOH . H 4 HOH B 22 322 19 HOH HOH . H 4 HOH B 23 323 237 HOH HOH . H 4 HOH B 24 324 194 HOH HOH . H 4 HOH B 25 325 17 HOH HOH . H 4 HOH B 26 326 82 HOH HOH . H 4 HOH B 27 327 48 HOH HOH . H 4 HOH B 28 328 16 HOH HOH . H 4 HOH B 29 329 196 HOH HOH . H 4 HOH B 30 330 64 HOH HOH . H 4 HOH B 31 331 32 HOH HOH . H 4 HOH B 32 332 39 HOH HOH . H 4 HOH B 33 333 40 HOH HOH . H 4 HOH B 34 334 46 HOH HOH . H 4 HOH B 35 335 12 HOH HOH . H 4 HOH B 36 336 67 HOH HOH . H 4 HOH B 37 337 49 HOH HOH . H 4 HOH B 38 338 1 HOH HOH . H 4 HOH B 39 339 26 HOH HOH . H 4 HOH B 40 340 33 HOH HOH . H 4 HOH B 41 341 104 HOH HOH . H 4 HOH B 42 342 76 HOH HOH . H 4 HOH B 43 343 115 HOH HOH . H 4 HOH B 44 344 171 HOH HOH . H 4 HOH B 45 345 29 HOH HOH . H 4 HOH B 46 346 230 HOH HOH . H 4 HOH B 47 347 203 HOH HOH . H 4 HOH B 48 348 167 HOH HOH . H 4 HOH B 49 349 28 HOH HOH . H 4 HOH B 50 350 110 HOH HOH . H 4 HOH B 51 351 206 HOH HOH . H 4 HOH B 52 352 201 HOH HOH . H 4 HOH B 53 353 47 HOH HOH . H 4 HOH B 54 354 239 HOH HOH . H 4 HOH B 55 355 93 HOH HOH . H 4 HOH B 56 356 147 HOH HOH . H 4 HOH B 57 357 78 HOH HOH . H 4 HOH B 58 358 235 HOH HOH . H 4 HOH B 59 359 141 HOH HOH . H 4 HOH B 60 360 71 HOH HOH . H 4 HOH B 61 361 56 HOH HOH . H 4 HOH B 62 362 9 HOH HOH . H 4 HOH B 63 363 252 HOH HOH . H 4 HOH B 64 364 44 HOH HOH . H 4 HOH B 65 365 222 HOH HOH . H 4 HOH B 66 366 34 HOH HOH . H 4 HOH B 67 367 68 HOH HOH . H 4 HOH B 68 368 211 HOH HOH . H 4 HOH B 69 369 7 HOH HOH . H 4 HOH B 70 370 191 HOH HOH . H 4 HOH B 71 371 140 HOH HOH . H 4 HOH B 72 372 111 HOH HOH . H 4 HOH B 73 373 217 HOH HOH . H 4 HOH B 74 374 77 HOH HOH . H 4 HOH B 75 375 207 HOH HOH . H 4 HOH B 76 376 20 HOH HOH . H 4 HOH B 77 377 202 HOH HOH . H 4 HOH B 78 378 187 HOH HOH . H 4 HOH B 79 379 242 HOH HOH . H 4 HOH B 80 380 149 HOH HOH . H 4 HOH B 81 381 168 HOH HOH . H 4 HOH B 82 382 86 HOH HOH . H 4 HOH B 83 383 142 HOH HOH . H 4 HOH B 84 384 169 HOH HOH . H 4 HOH B 85 385 136 HOH HOH . H 4 HOH B 86 386 129 HOH HOH . H 4 HOH B 87 387 250 HOH HOH . H 4 HOH B 88 388 163 HOH HOH . H 4 HOH B 89 389 226 HOH HOH . H 4 HOH B 90 390 145 HOH HOH . H 4 HOH B 91 391 197 HOH HOH . H 4 HOH B 92 392 176 HOH HOH . H 4 HOH B 93 393 254 HOH HOH . H 4 HOH B 94 394 181 HOH HOH . H 4 HOH B 95 395 182 HOH HOH . H 4 HOH B 96 396 193 HOH HOH . H 4 HOH B 97 397 90 HOH HOH . H 4 HOH B 98 398 210 HOH HOH . H 4 HOH B 99 399 150 HOH HOH . H 4 HOH B 100 400 158 HOH HOH . H 4 HOH B 101 401 139 HOH HOH . H 4 HOH B 102 402 245 HOH HOH . H 4 HOH B 103 403 122 HOH HOH . H 4 HOH B 104 404 152 HOH HOH . H 4 HOH B 105 405 215 HOH HOH . H 4 HOH B 106 406 55 HOH HOH . H 4 HOH B 107 407 159 HOH HOH . H 4 HOH B 108 408 174 HOH HOH . H 4 HOH B 109 409 178 HOH HOH . H 4 HOH B 110 410 248 HOH HOH . H 4 HOH B 111 411 186 HOH HOH . H 4 HOH B 112 412 247 HOH HOH . H 4 HOH B 113 413 148 HOH HOH . H 4 HOH B 114 414 133 HOH HOH . H 4 HOH B 115 415 109 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 3 18.444 1.267 -6.13 1 56.99 ? C1 EDO 203 B 1 HETATM 2 O O1 EDO . . . F 3 17.624 1.107 -4.994 1 51.61 ? O1 EDO 203 B 1 HETATM 3 C C2 EDO . . . F 3 19.734 0.482 -6.049 1 64.16 ? C2 EDO 203 B 1 HETATM 4 O O2 EDO . . . F 3 20.171 0.497 -7.416 1 67.23 ? O2 EDO 203 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #