data_6JQN
#
_model_server_result.job_id            OggjilvM12aOCi9di6XPSQ 
_model_server_result.datetime_utc      '2024-11-22 15:13:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jqn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":802}' 
#
_entry.id    6JQN 
#
_exptl.entry_id    6JQN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              893.73 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'OCTANOYL-COENZYME A' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JQN 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JQN 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 H N N 
? 3 J N N 
? 3 L N N 
? 3 N N N 
? 3 P N N 
? 3 Q N N 
#
_chem_comp.formula           'C29 H50 N7 O17 P3 S' 
_chem_comp.formula_weight    893.73 
_chem_comp.id                CO8 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'OCTANOYL-COENZYME A' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1A C2A CO8 sing 70 n y 
N1A C6A CO8 doub 71 n y 
C2A N3A CO8 doub 72 n y 
C2A H2A CO8 sing 73 n n 
N3A C4A CO8 sing 74 n y 
C4A C5A CO8 doub 75 n y 
C4A N9A CO8 sing 76 n y 
C5A C6A CO8 sing 77 n y 
C5A N7A CO8 sing 78 n y 
C6A N6A CO8 sing 79 n n 
N6A H61A CO8 sing 80 n n 
N6A H62A CO8 sing 81 n n 
N7A C8A CO8 doub 82 n y 
C8A N9A CO8 sing 83 n y 
C8A H8A CO8 sing 84 n n 
N9A C1B CO8 sing 85 n n 
C1B C2B CO8 sing 86 n n 
C1B O4B CO8 sing 87 n n 
C1B H1B CO8 sing 88 n n 
C2B O2B CO8 sing 89 n n 
C2B C3B CO8 sing 90 n n 
C2B H2B CO8 sing 91 n n 
O2B HO2A CO8 sing 92 n n 
C3B O3B CO8 sing 93 n n 
C3B C4B CO8 sing 94 n n 
C3B H3B CO8 sing 95 n n 
O3B P3B CO8 sing 96 n n 
P3B O7A CO8 doub 97 n n 
P3B O8A CO8 sing 98 n n 
P3B O9A CO8 sing 99 n n 
O8A HOA8 CO8 sing 100 n n 
O9A HOA9 CO8 sing 101 n n 
C4B O4B CO8 sing 102 n n 
C4B C5B CO8 sing 103 n n 
C4B H4B CO8 sing 104 n n 
C5B O5B CO8 sing 105 n n 
C5B H51A CO8 sing 106 n n 
C5B H52A CO8 sing 107 n n 
O5B P1A CO8 sing 108 n n 
P1A O1A CO8 doub 109 n n 
P1A O2A CO8 sing 110 n n 
P1A O3A CO8 sing 111 n n 
O2A HOA2 CO8 sing 112 n n 
O3A P2A CO8 sing 113 n n 
P2A O4A CO8 doub 114 n n 
P2A O5A CO8 sing 115 n n 
P2A O6A CO8 sing 116 n n 
O5A HOA5 CO8 sing 117 n n 
O6A CCP CO8 sing 118 n n 
CBP CCP CO8 sing 119 n n 
CBP CDP CO8 sing 120 n n 
CBP CEP CO8 sing 121 n n 
CBP CAP CO8 sing 122 n n 
CCP H121 CO8 sing 123 n n 
CCP H122 CO8 sing 124 n n 
CDP H131 CO8 sing 125 n n 
CDP H132 CO8 sing 126 n n 
CDP H133 CO8 sing 127 n n 
CEP H141 CO8 sing 128 n n 
CEP H142 CO8 sing 129 n n 
CEP H143 CO8 sing 130 n n 
CAP OAP CO8 sing 131 n n 
CAP C9P CO8 sing 132 n n 
CAP H10 CO8 sing 133 n n 
OAP HO1 CO8 sing 134 n n 
C9P O9P CO8 doub 135 n n 
C9P N8P CO8 sing 136 n n 
N8P C7P CO8 sing 137 n n 
N8P HN8 CO8 sing 138 n n 
C7P C6P CO8 sing 139 n n 
C7P H71 CO8 sing 140 n n 
C7P H72 CO8 sing 141 n n 
C6P C5P CO8 sing 142 n n 
C6P H61 CO8 sing 143 n n 
C6P H62 CO8 sing 144 n n 
C5P O5P CO8 doub 145 n n 
C5P N4P CO8 sing 146 n n 
N4P C3P CO8 sing 147 n n 
N4P HN4 CO8 sing 148 n n 
C3P C2P CO8 sing 149 n n 
C3P H31 CO8 sing 150 n n 
C3P H32 CO8 sing 151 n n 
C2P S1P CO8 sing 152 n n 
C2P H21 CO8 sing 153 n n 
C2P H22 CO8 sing 154 n n 
S1P C1' CO8 sing 155 n n 
C1' O1' CO8 doub 156 n n 
C1' C2' CO8 sing 157 n n 
C2' C3' CO8 sing 158 n n 
C2' "H2'1" CO8 sing 159 n n 
C2' "H2'2" CO8 sing 160 n n 
C3' C4' CO8 sing 161 n n 
C3' "H3'1" CO8 sing 162 n n 
C3' "H3'2" CO8 sing 163 n n 
C4' C5' CO8 sing 164 n n 
C4' "H4'1" CO8 sing 165 n n 
C4' "H4'2" CO8 sing 166 n n 
C5' C6' CO8 sing 167 n n 
C5' "H5'1" CO8 sing 168 n n 
C5' "H5'2" CO8 sing 169 n n 
C6' C7' CO8 sing 170 n n 
C6' "H6'1" CO8 sing 171 n n 
C6' "H6'2" CO8 sing 172 n n 
C7' C8' CO8 sing 173 n n 
C7' "H7'1" CO8 sing 174 n n 
C7' "H7'2" CO8 sing 175 n n 
C8' "H8'1" CO8 sing 176 n n 
C8' "H8'2" CO8 sing 177 n n 
C8' "H8'3" CO8 sing 178 n n 
#
_atom_sites.entry_id                     6JQN 
_atom_sites.fract_transf_matrix[1][1]    0.00229 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.00229 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00229 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 NAP A 1 801 801 NAP NAP . 
H 3 CO8 A 1 802 802 CO8 CO8 . 
I 2 NAP B 1 801 801 NAP NAP . 
J 3 CO8 B 1 802 802 CO8 CO8 . 
K 2 NAP C 1 801 801 NAP NAP . 
L 3 CO8 C 1 802 802 CO8 CO8 . 
M 2 NAP D 1 801 801 NAP NAP . 
N 3 CO8 D 1 802 802 CO8 CO8 . 
O 2 NAP E 1 801 801 NAP NAP . 
P 3 CO8 E 1 802 802 CO8 CO8 . 
Q 3 CO8 F 1 802 802 CO8 CO8 . 
R 2 NAP F 1 801 801 NAP NAP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1A CO8 . . . H 3 220.16 248.545 235.548 1 52.54 ? N1A CO8 802 A 1 
HETATM 2 C C2A CO8 . . . H 3 221.486 248.306 235.569 1 52.54 ? C2A CO8 802 A 1 
HETATM 3 N N3A CO8 . . . H 3 222.279 248.404 234.488 1 52.54 ? N3A CO8 802 A 1 
HETATM 4 C C4A CO8 . . . H 3 221.768 248.761 233.287 1 52.54 ? C4A CO8 802 A 1 
HETATM 5 C C5A CO8 . . . H 3 220.328 249.042 233.186 1 52.54 ? C5A CO8 802 A 1 
HETATM 6 C C6A CO8 . . . H 3 219.52 248.909 234.415 1 52.54 ? C6A CO8 802 A 1 
HETATM 7 N N6A CO8 . . . H 3 218.187 249.147 234.398 1 52.54 ? N6A CO8 802 A 1 
HETATM 8 N N7A CO8 . . . H 3 220.08 249.362 231.908 1 52.54 ? N7A CO8 802 A 1 
HETATM 9 C C8A CO8 . . . H 3 221.258 249.299 231.246 1 52.54 ? C8A CO8 802 A 1 
HETATM 10 N N9A CO8 . . . H 3 222.264 248.942 232.064 1 52.54 ? N9A CO8 802 A 1 
HETATM 11 C C1B CO8 . . . H 3 223.675 248.788 231.626 1 52.54 ? C1B CO8 802 A 1 
HETATM 12 C C2B CO8 . . . H 3 224.597 249.814 232.244 1 52.54 ? C2B CO8 802 A 1 
HETATM 13 O O2B CO8 . . . H 3 224.355 251.104 231.68 1 52.54 ? O2B CO8 802 A 1 
HETATM 14 C C3B CO8 . . . H 3 225.94 249.257 231.834 1 52.54 ? C3B CO8 802 A 1 
HETATM 15 O O3B CO8 . . . H 3 226.195 249.649 230.492 1 52.54 ? O3B CO8 802 A 1 
HETATM 16 P P3B CO8 . . . H 3 227.179 250.865 230.124 1 52.54 ? P3B CO8 802 A 1 
HETATM 17 O O7A CO8 . . . H 3 227.222 251.01 228.624 1 52.54 ? O7A CO8 802 A 1 
HETATM 18 O O8A CO8 . . . H 3 226.631 252.125 230.747 1 52.54 ? O8A CO8 802 A 1 
HETATM 19 O O9A CO8 . . . H 3 228.552 250.576 230.672 1 52.54 ? O9A CO8 802 A 1 
HETATM 20 C C4B CO8 . . . H 3 225.707 247.751 231.822 1 52.54 ? C4B CO8 802 A 1 
HETATM 21 O O4B CO8 . . . H 3 224.294 247.553 231.991 1 52.54 ? O4B CO8 802 A 1 
HETATM 22 C C5B CO8 . . . H 3 226.553 246.993 232.846 1 52.54 ? C5B CO8 802 A 1 
HETATM 23 O O5B CO8 . . . H 3 225.958 246.983 234.141 1 52.54 ? O5B CO8 802 A 1 
HETATM 24 P P1A CO8 . . . H 3 226.675 247.724 235.377 1 52.54 ? P1A CO8 802 A 1 
HETATM 25 O O1A CO8 . . . H 3 226.639 249.211 235.129 1 52.54 ? O1A CO8 802 A 1 
HETATM 26 O O2A CO8 . . . H 3 225.905 247.418 236.638 1 52.54 ? O2A CO8 802 A 1 
HETATM 27 O O3A CO8 . . . H 3 228.225 247.284 235.505 1 52.54 ? O3A CO8 802 A 1 
HETATM 28 P P2A CO8 . . . H 3 228.806 245.98 236.261 1 52.54 ? P2A CO8 802 A 1 
HETATM 29 O O4A CO8 . . . H 3 230.156 246.327 236.836 1 52.54 ? O4A CO8 802 A 1 
HETATM 30 O O5A CO8 . . . H 3 227.892 245.527 237.371 1 52.54 ? O5A CO8 802 A 1 
HETATM 31 O O6A CO8 . . . H 3 229.001 244.759 235.235 1 52.54 ? O6A CO8 802 A 1 
HETATM 32 C CBP CO8 . . . H 3 228.407 242.543 234.452 1 52.54 ? CBP CO8 802 A 1 
HETATM 33 C CCP CO8 . . . H 3 227.911 243.884 234.976 1 52.54 ? CCP CO8 802 A 1 
HETATM 34 C CDP CO8 . . . H 3 229.582 242.1 235.307 1 52.54 ? CDP CO8 802 A 1 
HETATM 35 C CEP CO8 . . . H 3 228.881 242.658 233.015 1 52.54 ? CEP CO8 802 A 1 
HETATM 36 C CAP CO8 . . . H 3 227.319 241.468 234.584 1 52.54 ? CAP CO8 802 A 1 
HETATM 37 O OAP CO8 . . . H 3 226.712 241.594 235.875 1 52.54 ? OAP CO8 802 A 1 
HETATM 38 C C9P CO8 . . . H 3 226.221 241.488 233.548 1 52.54 ? C9P CO8 802 A 1 
HETATM 39 O O9P CO8 . . . H 3 225.619 242.498 233.243 1 52.54 ? O9P CO8 802 A 1 
HETATM 40 N N8P CO8 . . . H 3 225.91 240.327 232.99 1 52.54 ? N8P CO8 802 A 1 
HETATM 41 C C7P CO8 . . . H 3 226.923 239.491 232.392 1 52.54 ? C7P CO8 802 A 1 
HETATM 42 C C6P CO8 . . . H 3 226.716 239.36 230.894 1 52.54 ? C6P CO8 802 A 1 
HETATM 43 C C5P CO8 . . . H 3 225.865 238.148 230.622 1 52.54 ? C5P CO8 802 A 1 
HETATM 44 O O5P CO8 . . . H 3 224.951 237.84 231.365 1 52.54 ? O5P CO8 802 A 1 
HETATM 45 N N4P CO8 . . . H 3 226.183 237.457 229.538 1 52.54 ? N4P CO8 802 A 1 
HETATM 46 C C3P CO8 . . . H 3 225.486 236.241 229.185 1 52.54 ? C3P CO8 802 A 1 
HETATM 47 C C2P CO8 . . . H 3 226.187 235.013 229.751 1 52.54 ? C2P CO8 802 A 1 
HETATM 48 S S1P CO8 . . . H 3 227.908 235.331 229.952 1 52.54 ? S1P CO8 802 A 1 
HETATM 49 C C1' CO8 . . . H 3 228.484 234.953 228.442 1 52.54 ? C1' CO8 802 A 1 
HETATM 50 O O1' CO8 . . . H 3 227.752 234.443 227.612 1 52.54 ? O1' CO8 802 A 1 
HETATM 51 C C2' CO8 . . . H 3 229.924 235.245 228.112 1 52.54 ? C2' CO8 802 A 1 
HETATM 52 C C3' CO8 . . . H 3 230.242 234.729 226.716 1 52.54 ? C3' CO8 802 A 1 
HETATM 53 C C4' CO8 . . . H 3 231.33 235.584 226.086 1 52.54 ? C4' CO8 802 A 1 
HETATM 54 C C5' CO8 . . . H 3 231.67 235.098 224.688 1 52.54 ? C5' CO8 802 A 1 
HETATM 55 C C6' CO8 . . . H 3 232.231 236.234 223.845 1 52.54 ? C6' CO8 802 A 1 
HETATM 56 C C7' CO8 . . . H 3 231.115 237.152 223.37 1 52.54 ? C7' CO8 802 A 1 
HETATM 57 C C8' CO8 . . . H 3 230.101 236.408 222.527 1 52.54 ? C8' CO8 802 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           262 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           57 
#