data_6JQO
#
_model_server_result.job_id            bnCrU7FOIW5Eyc64ZbWxVg 
_model_server_result.datetime_utc      '2024-11-14 18:43:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jqo 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":801}' 
#
_entry.id    6JQO 
#
_exptl.entry_id    6JQO 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JQO 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               1 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JQO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 K N N 
? 2 M N N 
? 2 O N N 
? 2 Q N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 330 n n 
PA O2A NAP sing 331 n n 
PA O5B NAP sing 332 n n 
PA O3 NAP sing 333 n n 
O2A HOA2 NAP sing 334 n n 
O5B C5B NAP sing 335 n n 
C5B C4B NAP sing 336 n n 
C5B H51A NAP sing 337 n n 
C5B H52A NAP sing 338 n n 
C4B O4B NAP sing 339 n n 
C4B C3B NAP sing 340 n n 
C4B H4B NAP sing 341 n n 
O4B C1B NAP sing 342 n n 
C3B O3B NAP sing 343 n n 
C3B C2B NAP sing 344 n n 
C3B H3B NAP sing 345 n n 
O3B HO3A NAP sing 346 n n 
C2B O2B NAP sing 347 n n 
C2B C1B NAP sing 348 n n 
C2B H2B NAP sing 349 n n 
O2B P2B NAP sing 350 n n 
C1B N9A NAP sing 351 n n 
C1B H1B NAP sing 352 n n 
N9A C8A NAP sing 353 n y 
N9A C4A NAP sing 354 n y 
C8A N7A NAP doub 355 n y 
C8A H8A NAP sing 356 n n 
N7A C5A NAP sing 357 n y 
C5A C6A NAP sing 358 n y 
C5A C4A NAP doub 359 n y 
C6A N6A NAP sing 360 n n 
C6A N1A NAP doub 361 n y 
N6A H61A NAP sing 362 n n 
N6A H62A NAP sing 363 n n 
N1A C2A NAP sing 364 n y 
C2A N3A NAP doub 365 n y 
C2A H2A NAP sing 366 n n 
N3A C4A NAP sing 367 n y 
O3 PN NAP sing 368 n n 
PN O1N NAP doub 369 n n 
PN O2N NAP sing 370 n n 
PN O5D NAP sing 371 n n 
O5D C5D NAP sing 372 n n 
C5D C4D NAP sing 373 n n 
C5D H51N NAP sing 374 n n 
C5D H52N NAP sing 375 n n 
C4D O4D NAP sing 376 n n 
C4D C3D NAP sing 377 n n 
C4D H4D NAP sing 378 n n 
O4D C1D NAP sing 379 n n 
C3D O3D NAP sing 380 n n 
C3D C2D NAP sing 381 n n 
C3D H3D NAP sing 382 n n 
O3D HO3N NAP sing 383 n n 
C2D O2D NAP sing 384 n n 
C2D C1D NAP sing 385 n n 
C2D H2D NAP sing 386 n n 
O2D HO2N NAP sing 387 n n 
C1D N1N NAP sing 388 n n 
C1D H1D NAP sing 389 n n 
N1N C2N NAP sing 390 n y 
N1N C6N NAP doub 391 n y 
C2N C3N NAP doub 392 n y 
C2N H2N NAP sing 393 n n 
C3N C7N NAP sing 394 n n 
C3N C4N NAP sing 395 n y 
C7N O7N NAP doub 396 n n 
C7N N7N NAP sing 397 n n 
N7N H71N NAP sing 398 n n 
N7N H72N NAP sing 399 n n 
C4N C5N NAP doub 400 n y 
C4N H4N NAP sing 401 n n 
C5N C6N NAP sing 402 n y 
C5N H5N NAP sing 403 n n 
C6N H6N NAP sing 404 n n 
P2B O1X NAP doub 405 n n 
P2B O2X NAP sing 406 n n 
P2B O3X NAP sing 407 n n 
O2X HOP2 NAP sing 408 n n 
O3X HOP3 NAP sing 409 n n 
#
_atom_sites.entry_id                     6JQO 
_atom_sites.fract_transf_matrix[1][1]    0.002334 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.002334 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002334 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 NAP A 1 801 801 NAP NAP . 
H 3 COO A 1 802 802 COO COO . 
I 2 NAP B 1 801 801 NAP NAP . 
J 3 COO B 1 802 802 COO COO . 
K 2 NAP C 1 801 801 NAP NAP . 
L 3 COO C 1 802 802 COO COO . 
M 2 NAP D 1 801 801 NAP NAP . 
N 3 COO D 1 802 802 COO COO . 
O 2 NAP E 1 801 801 NAP NAP . 
P 3 COO E 1 802 802 COO COO . 
Q 2 NAP F 1 801 801 NAP NAP . 
R 3 COO F 1 802 802 COO COO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . K 2 269.38 163.129 198.438 1 45.82 ? PA NAP 801 C 1 
HETATM 2 O O1A NAP . . . K 2 269.431 162.704 199.882 1 45.82 ? O1A NAP 801 C 1 
HETATM 3 O O2A NAP . . . K 2 270.054 162.105 197.561 1 45.82 ? O2A NAP 801 C 1 
HETATM 4 O O5B NAP . . . K 2 270.14 164.531 198.277 1 45.82 ? O5B NAP 801 C 1 
HETATM 5 C C5B NAP . . . K 2 269.535 165.741 198.715 1 45.82 ? C5B NAP 801 C 1 
HETATM 6 C C4B NAP . . . K 2 270.56 166.867 198.724 1 45.82 ? C4B NAP 801 C 1 
HETATM 7 O O4B NAP . . . K 2 271.588 166.59 199.674 1 45.82 ? O4B NAP 801 C 1 
HETATM 8 C C3B NAP . . . K 2 271.251 167.042 197.385 1 45.82 ? C3B NAP 801 C 1 
HETATM 9 O O3B NAP . . . K 2 271.293 168.433 197.072 1 45.82 ? O3B NAP 801 C 1 
HETATM 10 C C2B NAP . . . K 2 272.656 166.538 197.609 1 45.82 ? C2B NAP 801 C 1 
HETATM 11 O O2B NAP . . . K 2 273.594 167.225 196.792 1 45.82 ? O2B NAP 801 C 1 
HETATM 12 C C1B NAP . . . K 2 272.863 166.818 199.082 1 45.82 ? C1B NAP 801 C 1 
HETATM 13 N N9A NAP . . . K 2 273.838 165.883 199.676 1 45.82 ? N9A NAP 801 C 1 
HETATM 14 C C8A NAP . . . K 2 273.879 164.554 199.489 1 45.82 ? C8A NAP 801 C 1 
HETATM 15 N N7A NAP . . . K 2 274.897 163.999 200.19 1 45.82 ? N7A NAP 801 C 1 
HETATM 16 C C5A NAP . . . K 2 275.52 164.993 200.846 1 45.82 ? C5A NAP 801 C 1 
HETATM 17 C C6A NAP . . . K 2 276.671 165.107 201.766 1 45.82 ? C6A NAP 801 C 1 
HETATM 18 N N6A NAP . . . K 2 277.377 164.013 202.131 1 45.82 ? N6A NAP 801 C 1 
HETATM 19 N N1A NAP . . . K 2 276.991 166.336 202.224 1 45.82 ? N1A NAP 801 C 1 
HETATM 20 C C2A NAP . . . K 2 276.298 167.431 201.866 1 45.82 ? C2A NAP 801 C 1 
HETATM 21 N N3A NAP . . . K 2 275.244 167.4 201.036 1 45.82 ? N3A NAP 801 C 1 
HETATM 22 C C4A NAP . . . K 2 274.815 166.232 200.506 1 45.82 ? C4A NAP 801 C 1 
HETATM 23 O O3 NAP . . . K 2 267.847 163.278 197.981 1 45.82 ? O3 NAP 801 C 1 
HETATM 24 P PN NAP . . . K 2 267.437 163.558 196.452 1 45.82 ? PN NAP 801 C 1 
HETATM 25 O O1N NAP . . . K 2 268.429 164.5 195.822 1 45.82 ? O1N NAP 801 C 1 
HETATM 26 O O2N NAP . . . K 2 267.414 162.249 195.705 1 45.82 ? O2N NAP 801 C 1 
HETATM 27 O O5D NAP . . . K 2 265.971 164.214 196.388 1 45.82 ? O5D NAP 801 C 1 
HETATM 28 C C5D NAP . . . K 2 264.809 163.392 196.312 1 45.82 ? C5D NAP 801 C 1 
HETATM 29 C C4D NAP . . . K 2 264.294 163.045 197.697 1 45.82 ? C4D NAP 801 C 1 
HETATM 30 O O4D NAP . . . K 2 263.921 164.245 198.375 1 45.82 ? O4D NAP 801 C 1 
HETATM 31 C C3D NAP . . . K 2 263.047 162.188 197.607 1 45.82 ? C3D NAP 801 C 1 
HETATM 32 O O3D NAP . . . K 2 263.113 161.159 198.593 1 45.82 ? O3D NAP 801 C 1 
HETATM 33 C C2D NAP . . . K 2 261.924 163.137 197.943 1 45.82 ? C2D NAP 801 C 1 
HETATM 34 O O2D NAP . . . K 2 260.87 162.456 198.62 1 45.82 ? O2D NAP 801 C 1 
HETATM 35 C C1D NAP . . . K 2 262.582 164.146 198.857 1 45.82 ? C1D NAP 801 C 1 
HETATM 36 N N1N NAP . . . K 2 261.91 165.438 198.762 1 45.82 ? N1N NAP 801 C 1 
HETATM 37 C C2N NAP . . . K 2 261.29 165.94 199.833 1 45.82 ? C2N NAP 801 C 1 
HETATM 38 C C3N NAP . . . K 2 260.645 167.165 199.775 1 45.82 ? C3N NAP 801 C 1 
HETATM 39 C C7N NAP . . . K 2 259.963 167.715 200.985 1 45.82 ? C7N NAP 801 C 1 
HETATM 40 O O7N NAP . . . K 2 259.885 167.038 201.991 1 45.82 ? O7N NAP 801 C 1 
HETATM 41 N N7N NAP . . . K 2 259.47 168.947 200.926 1 45.82 ? N7N NAP 801 C 1 
HETATM 42 C C4N NAP . . . K 2 260.621 167.893 198.6 1 45.82 ? C4N NAP 801 C 1 
HETATM 43 C C5N NAP . . . K 2 261.247 167.41 197.466 1 45.82 ? C5N NAP 801 C 1 
HETATM 44 C C6N NAP . . . K 2 261.944 166.135 197.478 1 45.82 ? C6N NAP 801 C 1 
HETATM 45 P P2B NAP . . . K 2 274.392 166.418 195.652 1 45.82 ? P2B NAP 801 C 1 
HETATM 46 O O1X NAP . . . K 2 273.508 166.277 194.441 1 45.82 ? O1X NAP 801 C 1 
HETATM 47 O O2X NAP . . . K 2 275.642 167.186 195.313 1 45.82 ? O2X NAP 801 C 1 
HETATM 48 O O3X NAP . . . K 2 274.754 165.058 196.187 1 45.82 ? O3X NAP 801 C 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    51 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           48 
#