data_6JQO # _model_server_result.job_id 6k_OpLgslruHiZo5LLF6bQ _model_server_result.datetime_utc '2024-11-14 18:42:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":802}' # _entry.id 6JQO # _exptl.entry_id 6JQO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 835.608 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CROTONYL COENZYME A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JQO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N # _chem_comp.formula 'C25 H40 N7 O17 P3 S' _chem_comp.formula_weight 835.608 _chem_comp.id COO _chem_comp.mon_nstd_flag . _chem_comp.name 'CROTONYL COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 O1 COO sing 70 n n C13 H13 COO sing 71 n n C13 C1 COO sing 72 n n C13 C11 COO sing 73 n n C11 C15 COO sing 74 n n C11 C14 COO sing 75 n n C11 C12 COO sing 76 n n C14 H141 COO sing 77 n n C14 H142 COO sing 78 n n C14 H143 COO sing 79 n n C12 H121 COO sing 80 n n C12 H122 COO sing 81 n n C12 O6A COO sing 82 n n O6A P2A COO sing 83 n n P2A O4A COO doub 84 n n P2A O5A COO sing 85 n n P2A O3A COO sing 86 n n O5A H5A COO sing 87 n n O3A P1A COO sing 88 n n P1A O2A COO doub 89 n n P1A O1A COO sing 90 n n P1A O5X COO sing 91 n n O1A H1A COO sing 92 n n O5X C5X COO sing 93 n n C5X H5X1 COO sing 94 n n C5X H5X2 COO sing 95 n n C5X C4X COO sing 96 n n C4X H4X COO sing 97 n n C4X O4X COO sing 98 n n C4X C3X COO sing 99 n n O4X C1X COO sing 100 n n C3X C2X COO sing 101 n n C3X H3X COO sing 102 n n C3X O3X COO sing 103 n n O3X P3X COO sing 104 n n P3X O9A COO doub 105 n n P3X O7A COO sing 106 n n P3X O8A COO sing 107 n n O7A H7A COO sing 108 n n O8A H2 COO sing 109 n n C2X C1X COO sing 110 n n C2X H2X COO sing 111 n n C2X O2X COO sing 112 n n O2X H1 COO sing 113 n n C1X H1X COO sing 114 n n C1X N9A COO sing 115 n n N9A C8A COO sing 116 n y N9A C4A COO sing 117 n y C8A H8A COO sing 118 n n C8A N7A COO doub 119 n y N7A C5A COO sing 120 n y C5A C6A COO doub 121 n y C5A C4A COO sing 122 n y C4A N3A COO doub 123 n y N3A C2A COO sing 124 n y C2A N1A COO doub 125 n y C2A H2A COO sing 126 n n N1A C6A COO sing 127 n y C6A N6A COO sing 128 n n N6A H6A1 COO sing 129 n n N6A H6A2 COO sing 130 n n O1 HO1 COO sing 131 n n C1 O2 COO doub 132 n n C1 N1 COO sing 133 n n N1 HN1 COO sing 134 n n N1 C2 COO sing 135 n n C2 H21 COO sing 136 n n C2 H22 COO sing 137 n n C2 C3 COO sing 138 n n C3 H31 COO sing 139 n n C3 H32 COO sing 140 n n C3 C4 COO sing 141 n n C4 O3 COO doub 142 n n C4 N2 COO sing 143 n n N2 HN2 COO sing 144 n n N2 C5 COO sing 145 n n C5 H51 COO sing 146 n n C5 H52 COO sing 147 n n C5 C6 COO sing 148 n n C6 H61 COO sing 149 n n C6 H62 COO sing 150 n n C6 S1 COO sing 151 n n S1 C7 COO sing 152 n n C7 O4 COO doub 153 n n C7 C8 COO sing 154 n n C8 H8 COO sing 155 n n C8 C9 COO doub 156 n n C9 H9 COO sing 157 n n C9 C10 COO sing 158 n n C10 H101 COO sing 159 n n C10 H102 COO sing 160 n n C10 H103 COO sing 161 n n C15 H151 COO sing 162 n n C15 H152 COO sing 163 n n C15 H153 COO sing 164 n n # _atom_sites.entry_id 6JQO _atom_sites.fract_transf_matrix[1][1] 0.002334 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 NAP A 1 801 801 NAP NAP . H 3 COO A 1 802 802 COO COO . I 2 NAP B 1 801 801 NAP NAP . J 3 COO B 1 802 802 COO COO . K 2 NAP C 1 801 801 NAP NAP . L 3 COO C 1 802 802 COO COO . M 2 NAP D 1 801 801 NAP NAP . N 3 COO D 1 802 802 COO COO . O 2 NAP E 1 801 801 NAP NAP . P 3 COO E 1 802 802 COO COO . Q 2 NAP F 1 801 801 NAP NAP . R 3 COO F 1 802 802 COO COO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 COO . . . N 3 251.304 190.094 237.924 1 69.35 ? C13 COO 802 D 1 HETATM 2 C C11 COO . . . N 3 250.158 189.089 238.084 1 69.35 ? C11 COO 802 D 1 HETATM 3 C C14 COO . . . N 3 250.609 187.667 237.777 1 69.35 ? C14 COO 802 D 1 HETATM 4 C C12 COO . . . N 3 249.038 189.477 237.126 1 69.35 ? C12 COO 802 D 1 HETATM 5 O O6A COO . . . N 3 247.747 189.257 237.693 1 69.35 ? O6A COO 802 D 1 HETATM 6 P P2A COO . . . N 3 246.881 187.949 237.333 1 69.35 ? P2A COO 802 D 1 HETATM 7 O O4A COO . . . N 3 245.445 188.203 237.724 1 69.35 ? O4A COO 802 D 1 HETATM 8 O O5A COO . . . N 3 246.993 187.688 235.85 1 69.35 ? O5A COO 802 D 1 HETATM 9 O O3A COO . . . N 3 247.457 186.68 238.141 1 69.35 ? O3A COO 802 D 1 HETATM 10 P P1A COO . . . N 3 246.748 185.235 238.096 1 69.35 ? P1A COO 802 D 1 HETATM 11 O O2A COO . . . N 3 245.989 185.086 236.801 1 69.35 ? O2A COO 802 D 1 HETATM 12 O O1A COO . . . N 3 247.813 184.172 238.21 1 69.35 ? O1A COO 802 D 1 HETATM 13 O O5X COO . . . N 3 245.725 185.084 239.33 1 69.35 ? O5X COO 802 D 1 HETATM 14 C C5X COO . . . N 3 244.356 185.466 239.22 1 69.35 ? C5X COO 802 D 1 HETATM 15 C C4X COO . . . N 3 243.522 184.229 238.931 1 69.35 ? C4X COO 802 D 1 HETATM 16 O O4X COO . . . N 3 244.114 183.124 239.613 1 69.35 ? O4X COO 802 D 1 HETATM 17 C C3X COO . . . N 3 242.1 184.39 239.443 1 69.35 ? C3X COO 802 D 1 HETATM 18 O O3X COO . . . N 3 241.164 183.976 238.453 1 69.35 ? O3X COO 802 D 1 HETATM 19 P P3X COO . . . N 3 240.746 184.919 237.214 1 69.35 ? P3X COO 802 D 1 HETATM 20 O O9A COO . . . N 3 241.416 186.265 237.346 1 69.35 ? O9A COO 802 D 1 HETATM 21 O O7A COO . . . N 3 239.246 185.088 237.218 1 69.35 ? O7A COO 802 D 1 HETATM 22 O O8A COO . . . N 3 241.173 184.244 235.935 1 69.35 ? O8A COO 802 D 1 HETATM 23 C C2X COO . . . N 3 241.992 183.456 240.632 1 69.35 ? C2X COO 802 D 1 HETATM 24 O O2X COO . . . N 3 240.836 182.625 240.495 1 69.35 ? O2X COO 802 D 1 HETATM 25 C C1X COO . . . N 3 243.248 182.599 240.62 1 69.35 ? C1X COO 802 D 1 HETATM 26 N N9A COO . . . N 3 243.887 182.629 241.965 1 69.35 ? N9A COO 802 D 1 HETATM 27 C C8A COO . . . N 3 243.219 182.458 243.122 1 69.35 ? C8A COO 802 D 1 HETATM 28 N N7A COO . . . N 3 244.05 182.532 244.191 1 69.35 ? N7A COO 802 D 1 HETATM 29 C C5A COO . . . N 3 245.288 182.76 243.721 1 69.35 ? C5A COO 802 D 1 HETATM 30 C C4A COO . . . N 3 245.181 182.825 242.255 1 69.35 ? C4A COO 802 D 1 HETATM 31 N N3A COO . . . N 3 246.315 183.046 241.545 1 69.35 ? N3A COO 802 D 1 HETATM 32 C C2A COO . . . N 3 247.503 183.203 242.152 1 69.35 ? C2A COO 802 D 1 HETATM 33 N N1A COO . . . N 3 247.67 183.156 243.484 1 69.35 ? N1A COO 802 D 1 HETATM 34 C C6A COO . . . N 3 246.63 182.943 244.319 1 69.35 ? C6A COO 802 D 1 HETATM 35 N N6A COO . . . N 3 246.809 182.897 245.66 1 69.35 ? N6A COO 802 D 1 HETATM 36 O O1 COO . . . N 3 251.346 190.547 236.567 1 69.35 ? O1 COO 802 D 1 HETATM 37 C C1 COO . . . N 3 252.663 189.546 238.276 1 69.35 ? C1 COO 802 D 1 HETATM 38 O O2 COO . . . N 3 253.462 189.282 237.393 1 69.35 ? O2 COO 802 D 1 HETATM 39 N N1 COO . . . N 3 252.956 189.392 239.564 1 69.35 ? N1 COO 802 D 1 HETATM 40 C C2 COO . . . N 3 254.247 188.897 239.991 1 69.35 ? C2 COO 802 D 1 HETATM 41 C C3 COO . . . N 3 254.113 187.64 240.838 1 69.35 ? C3 COO 802 D 1 HETATM 42 C C4 COO . . . N 3 255.476 187.234 241.338 1 69.35 ? C4 COO 802 D 1 HETATM 43 O O3 COO . . . N 3 255.711 187.207 242.534 1 69.35 ? O3 COO 802 D 1 HETATM 44 N N2 COO . . . N 3 256.378 186.92 240.417 1 69.35 ? N2 COO 802 D 1 HETATM 45 C C5 COO . . . N 3 257.645 186.331 240.795 1 69.35 ? C5 COO 802 D 1 HETATM 46 C C6 COO . . . N 3 257.871 184.99 240.112 1 69.35 ? C6 COO 802 D 1 HETATM 47 S S1 COO . . . N 3 259.321 184.25 240.778 1 69.35 ? S1 COO 802 D 1 HETATM 48 C C7 COO . . . N 3 259.568 183.038 239.666 1 69.35 ? C7 COO 802 D 1 HETATM 49 O O4 COO . . . N 3 258.622 182.573 239.056 1 69.35 ? O4 COO 802 D 1 HETATM 50 C C8 COO . . . N 3 260.933 182.542 239.425 1 69.35 ? C8 COO 802 D 1 HETATM 51 C C9 COO . . . N 3 261.136 181.261 239.139 1 69.35 ? C9 COO 802 D 1 HETATM 52 C C10 COO . . . N 3 262.542 180.773 238.896 1 69.35 ? C10 COO 802 D 1 HETATM 53 C C15 COO . . . N 3 249.619 189.142 239.513 1 69.35 ? C15 COO 802 D 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 70 _model_server_stats.query_time_ms 283 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 53 #