data_6JQO # _model_server_result.job_id xgYFaSLnZbtcBr6pV2k4bA _model_server_result.datetime_utc '2024-11-14 18:30:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jqo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"R","auth_seq_id":802}' # _entry.id 6JQO # _exptl.entry_id 6JQO _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 835.608 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CROTONYL COENZYME A' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JQO _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JQO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N # _chem_comp.formula 'C25 H40 N7 O17 P3 S' _chem_comp.formula_weight 835.608 _chem_comp.id COO _chem_comp.mon_nstd_flag . _chem_comp.name 'CROTONYL COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C13 O1 COO sing 70 n n C13 H13 COO sing 71 n n C13 C1 COO sing 72 n n C13 C11 COO sing 73 n n C11 C15 COO sing 74 n n C11 C14 COO sing 75 n n C11 C12 COO sing 76 n n C14 H141 COO sing 77 n n C14 H142 COO sing 78 n n C14 H143 COO sing 79 n n C12 H121 COO sing 80 n n C12 H122 COO sing 81 n n C12 O6A COO sing 82 n n O6A P2A COO sing 83 n n P2A O4A COO doub 84 n n P2A O5A COO sing 85 n n P2A O3A COO sing 86 n n O5A H5A COO sing 87 n n O3A P1A COO sing 88 n n P1A O2A COO doub 89 n n P1A O1A COO sing 90 n n P1A O5X COO sing 91 n n O1A H1A COO sing 92 n n O5X C5X COO sing 93 n n C5X H5X1 COO sing 94 n n C5X H5X2 COO sing 95 n n C5X C4X COO sing 96 n n C4X H4X COO sing 97 n n C4X O4X COO sing 98 n n C4X C3X COO sing 99 n n O4X C1X COO sing 100 n n C3X C2X COO sing 101 n n C3X H3X COO sing 102 n n C3X O3X COO sing 103 n n O3X P3X COO sing 104 n n P3X O9A COO doub 105 n n P3X O7A COO sing 106 n n P3X O8A COO sing 107 n n O7A H7A COO sing 108 n n O8A H2 COO sing 109 n n C2X C1X COO sing 110 n n C2X H2X COO sing 111 n n C2X O2X COO sing 112 n n O2X H1 COO sing 113 n n C1X H1X COO sing 114 n n C1X N9A COO sing 115 n n N9A C8A COO sing 116 n y N9A C4A COO sing 117 n y C8A H8A COO sing 118 n n C8A N7A COO doub 119 n y N7A C5A COO sing 120 n y C5A C6A COO doub 121 n y C5A C4A COO sing 122 n y C4A N3A COO doub 123 n y N3A C2A COO sing 124 n y C2A N1A COO doub 125 n y C2A H2A COO sing 126 n n N1A C6A COO sing 127 n y C6A N6A COO sing 128 n n N6A H6A1 COO sing 129 n n N6A H6A2 COO sing 130 n n O1 HO1 COO sing 131 n n C1 O2 COO doub 132 n n C1 N1 COO sing 133 n n N1 HN1 COO sing 134 n n N1 C2 COO sing 135 n n C2 H21 COO sing 136 n n C2 H22 COO sing 137 n n C2 C3 COO sing 138 n n C3 H31 COO sing 139 n n C3 H32 COO sing 140 n n C3 C4 COO sing 141 n n C4 O3 COO doub 142 n n C4 N2 COO sing 143 n n N2 HN2 COO sing 144 n n N2 C5 COO sing 145 n n C5 H51 COO sing 146 n n C5 H52 COO sing 147 n n C5 C6 COO sing 148 n n C6 H61 COO sing 149 n n C6 H62 COO sing 150 n n C6 S1 COO sing 151 n n S1 C7 COO sing 152 n n C7 O4 COO doub 153 n n C7 C8 COO sing 154 n n C8 H8 COO sing 155 n n C8 C9 COO doub 156 n n C9 H9 COO sing 157 n n C9 C10 COO sing 158 n n C10 H101 COO sing 159 n n C10 H102 COO sing 160 n n C10 H103 COO sing 161 n n C15 H151 COO sing 162 n n C15 H152 COO sing 163 n n C15 H153 COO sing 164 n n # _atom_sites.entry_id 6JQO _atom_sites.fract_transf_matrix[1][1] 0.002334 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.002334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 NAP A 1 801 801 NAP NAP . H 3 COO A 1 802 802 COO COO . I 2 NAP B 1 801 801 NAP NAP . J 3 COO B 1 802 802 COO COO . K 2 NAP C 1 801 801 NAP NAP . L 3 COO C 1 802 802 COO COO . M 2 NAP D 1 801 801 NAP NAP . N 3 COO D 1 802 802 COO COO . O 2 NAP E 1 801 801 NAP NAP . P 3 COO E 1 802 802 COO COO . Q 2 NAP F 1 801 801 NAP NAP . R 3 COO F 1 802 802 COO COO . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 COO . . . R 3 175.153 194.382 237.981 1 69.5 ? C13 COO 802 F 1 HETATM 2 C C11 COO . . . R 3 174.802 195.865 238.145 1 69.5 ? C11 COO 802 F 1 HETATM 3 C C14 COO . . . R 3 173.396 196.159 237.639 1 69.5 ? C14 COO 802 F 1 HETATM 4 C C12 COO . . . R 3 175.812 196.694 237.358 1 69.5 ? C12 COO 802 F 1 HETATM 5 O O6A COO . . . R 3 176.106 197.937 237.999 1 69.5 ? O6A COO 802 F 1 HETATM 6 P P2A COO . . . R 3 175.355 199.294 237.569 1 69.5 ? P2A COO 802 F 1 HETATM 7 O O4A COO . . . R 3 176.22 200.463 237.975 1 69.5 ? O4A COO 802 F 1 HETATM 8 O O5A COO . . . R 3 175.16 199.259 236.071 1 69.5 ? O5A COO 802 F 1 HETATM 9 O O3A COO . . . R 3 173.935 199.355 238.335 1 69.5 ? O3A COO 802 F 1 HETATM 10 P P1A COO . . . R 3 172.717 200.347 237.963 1 69.5 ? P1A COO 802 F 1 HETATM 11 O O2A COO . . . R 3 172.641 200.558 236.472 1 69.5 ? O2A COO 802 F 1 HETATM 12 O O1A COO . . . R 3 171.438 199.715 238.453 1 69.5 ? O1A COO 802 F 1 HETATM 13 O O5X COO . . . R 3 172.88 201.779 238.682 1 69.5 ? O5X COO 802 F 1 HETATM 14 C C5X COO . . . R 3 173.842 202.732 238.238 1 69.5 ? C5X COO 802 F 1 HETATM 15 C C4X COO . . . R 3 173.386 204.12 238.665 1 69.5 ? C4X COO 802 F 1 HETATM 16 O O4X COO . . . R 3 172.288 203.981 239.567 1 69.5 ? O4X COO 802 F 1 HETATM 17 C C3X COO . . . R 3 174.472 204.901 239.39 1 69.5 ? C3X COO 802 F 1 HETATM 18 O O3X COO . . . R 3 174.906 206.018 238.617 1 69.5 ? O3X COO 802 F 1 HETATM 19 P P3X COO . . . R 3 175.686 205.85 237.219 1 69.5 ? P3X COO 802 F 1 HETATM 20 O O9A COO . . . R 3 176.462 204.555 237.236 1 69.5 ? O9A COO 802 F 1 HETATM 21 O O7A COO . . . R 3 176.633 207.014 237.058 1 69.5 ? O7A COO 802 F 1 HETATM 22 O O8A COO . . . R 3 174.683 205.856 236.091 1 69.5 ? O8A COO 802 F 1 HETATM 23 C C2X COO . . . R 3 173.831 205.409 240.667 1 69.5 ? C2X COO 802 F 1 HETATM 24 O O2X COO . . . R 3 173.841 206.839 240.684 1 69.5 ? O2X COO 802 F 1 HETATM 25 C C1X COO . . . R 3 172.394 204.911 240.646 1 69.5 ? C1X COO 802 F 1 HETATM 26 N N9A COO . . . R 3 172.029 204.31 241.96 1 69.5 ? N9A COO 802 F 1 HETATM 27 C C8A COO . . . R 3 172.134 204.955 243.137 1 69.5 ? C8A COO 802 F 1 HETATM 28 N N7A COO . . . R 3 171.731 204.176 244.17 1 69.5 ? N7A COO 802 F 1 HETATM 29 C C5A COO . . . R 3 171.356 202.993 243.655 1 69.5 ? C5A COO 802 F 1 HETATM 30 C C4A COO . . . R 3 171.552 203.079 242.199 1 69.5 ? C4A COO 802 F 1 HETATM 31 N N3A COO . . . R 3 171.237 201.994 241.45 1 69.5 ? N3A COO 802 F 1 HETATM 32 C C2A COO . . . R 3 170.76 200.869 242.012 1 69.5 ? C2A COO 802 F 1 HETATM 33 N N1A COO . . . R 3 170.558 200.724 243.333 1 69.5 ? N1A COO 802 F 1 HETATM 34 C C6A COO . . . R 3 170.827 201.722 244.201 1 69.5 ? C6A COO 802 F 1 HETATM 35 N N6A COO . . . R 3 170.621 201.568 245.531 1 69.5 ? N6A COO 802 F 1 HETATM 36 O O1 COO . . . R 3 175.717 194.175 236.68 1 69.5 ? O1 COO 802 F 1 HETATM 37 C C1 COO . . . R 3 173.985 193.443 238.148 1 69.5 ? C1 COO 802 F 1 HETATM 38 O O2 COO . . . R 3 173.491 192.898 237.174 1 69.5 ? O2 COO 802 F 1 HETATM 39 N N1 COO . . . R 3 173.547 193.217 239.384 1 69.5 ? N1 COO 802 F 1 HETATM 40 C C2 COO . . . R 3 172.367 192.422 239.654 1 69.5 ? C2 COO 802 F 1 HETATM 41 C C3 COO . . . R 3 171.357 193.199 240.486 1 69.5 ? C3 COO 802 F 1 HETATM 42 C C4 COO . . . R 3 170.376 192.244 241.121 1 69.5 ? C4 COO 802 F 1 HETATM 43 O O3 COO . . . R 3 170.332 192.125 242.334 1 69.5 ? O3 COO 802 F 1 HETATM 44 N N2 COO . . . R 3 169.589 191.558 240.3 1 69.5 ? N2 COO 802 F 1 HETATM 45 C C5 COO . . . R 3 168.496 190.757 240.81 1 69.5 ? C5 COO 802 F 1 HETATM 46 C C6 COO . . . R 3 167.164 191.156 240.189 1 69.5 ? C6 COO 802 F 1 HETATM 47 S S1 COO . . . R 3 165.884 190.16 240.873 1 69.5 ? S1 COO 802 F 1 HETATM 48 C C7 COO . . . R 3 164.635 190.56 239.85 1 69.5 ? C7 COO 802 F 1 HETATM 49 O O4 COO . . . R 3 164.694 191.586 239.197 1 69.5 ? O4 COO 802 F 1 HETATM 50 C C8 COO . . . R 3 163.467 189.671 239.731 1 69.5 ? C8 COO 802 F 1 HETATM 51 C C9 COO . . . R 3 162.349 190.119 239.172 1 69.5 ? C9 COO 802 F 1 HETATM 52 C C10 COO . . . R 3 161.155 189.205 239.054 1 69.5 ? C10 COO 802 F 1 HETATM 53 C C15 COO . . . R 3 174.902 196.262 239.617 1 69.5 ? C15 COO 802 F 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 191 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 53 #