data_6JQR # _model_server_result.job_id W7WkH4tgHcWvQL9GzlO_Cg _model_server_result.datetime_utc '2024-12-23 07:05:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jqr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1001}' # _entry.id 6JQR # _exptl.entry_id 6JQR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 552.711 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-ethyl-3-[[3-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]amino]-5-(oxan-4-ylamino)pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JQR _cell.length_a 82.367 _cell.length_b 82.367 _cell.length_c 146.469 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JQR _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C29 H44 N8 O3' _chem_comp.formula_weight 552.711 _chem_comp.id C6F _chem_comp.mon_nstd_flag . _chem_comp.name 6-ethyl-3-[[3-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]amino]-5-(oxan-4-ylamino)pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms gilteritinib # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C23 C22 C6F sing 70 n n C23 N24 C6F sing 71 n n O7 C6 C6F doub 72 n n C25 N24 C6F sing 73 n n C22 N21 C6F sing 74 n n N8 C6 C6F sing 75 n n N24 C26 C6F sing 76 n n C6 C5 C6F sing 77 n n C17 C16 C6F sing 78 n n C17 C18 C6F sing 79 n n C12 C13 C6F doub 80 n y C12 C11 C6F sing 81 n y C13 C14 C6F sing 82 n y N21 C18 C6F sing 83 n n N21 C27 C6F sing 84 n n C26 C27 C6F sing 85 n n C16 N15 C6F sing 86 n n N10 C11 C6F sing 87 n n N10 C9 C6F sing 88 n n C18 C19 C6F sing 89 n n C11 C31 C6F doub 90 n y C5 C9 C6F doub 91 n y C5 N4 C6F sing 92 n y C14 N15 C6F sing 93 n n C14 C28 C6F doub 94 n y C19 C20 C6F sing 95 n n N15 C20 C6F sing 96 n n C9 N32 C6F sing 97 n y N4 C3 C6F doub 98 n y C31 C28 C6F sing 99 n y C28 O29 C6F sing 100 n n N32 C33 C6F doub 101 n y C3 C33 C6F sing 102 n y C3 C2 C6F sing 103 n n C1 C2 C6F sing 104 n n O29 C30 C6F sing 105 n n C33 N34 C6F sing 106 n n N34 C35 C6F sing 107 n n C35 C40 C6F sing 108 n n C35 C36 C6F sing 109 n n C40 C39 C6F sing 110 n n C39 O38 C6F sing 111 n n C36 C37 C6F sing 112 n n C37 O38 C6F sing 113 n n C1 H1 C6F sing 114 n n C1 H2 C6F sing 115 n n C1 H3 C6F sing 116 n n C2 H4 C6F sing 117 n n C2 H5 C6F sing 118 n n N10 H6 C6F sing 119 n n C12 H7 C6F sing 120 n n C16 H8 C6F sing 121 n n C16 H9 C6F sing 122 n n C17 H10 C6F sing 123 n n C17 H11 C6F sing 124 n n C18 H12 C6F sing 125 n n C19 H13 C6F sing 126 n n C19 H14 C6F sing 127 n n C23 H15 C6F sing 128 n n C23 H16 C6F sing 129 n n C27 H17 C6F sing 130 n n C27 H18 C6F sing 131 n n C30 H19 C6F sing 132 n n C30 H20 C6F sing 133 n n C30 H21 C6F sing 134 n n C31 H22 C6F sing 135 n n C35 H23 C6F sing 136 n n C36 H24 C6F sing 137 n n C36 H25 C6F sing 138 n n C37 H26 C6F sing 139 n n C37 H27 C6F sing 140 n n C39 H28 C6F sing 141 n n C39 H29 C6F sing 142 n n C40 H30 C6F sing 143 n n C40 H31 C6F sing 144 n n N8 H32 C6F sing 145 n n N8 H33 C6F sing 146 n n C13 H34 C6F sing 147 n n C20 H35 C6F sing 148 n n C20 H36 C6F sing 149 n n C22 H38 C6F sing 150 n n C22 H39 C6F sing 151 n n C25 H41 C6F sing 152 n n C25 H42 C6F sing 153 n n C25 H43 C6F sing 154 n n C26 H44 C6F sing 155 n n C26 H45 C6F sing 156 n n N34 H46 C6F sing 157 n n # _atom_sites.entry_id 6JQR _atom_sites.fract_transf_matrix[1][1] 0.012141 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006827 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C6F A 1 1001 1001 C6F C6F . C 3 SO4 A 1 1002 1002 SO4 SO4 . D 3 SO4 A 1 1003 1003 SO4 SO4 . E 3 SO4 A 1 1004 1004 SO4 SO4 . F 4 GOL A 1 1005 1005 GOL GOL . G 4 GOL A 1 1006 1006 GOL GOL . H 5 CXS A 1 1007 1007 CXS CXS . I 4 GOL A 1 1008 1008 GOL GOL . J 6 HOH A 1 1101 1101 HOH HOH . J 6 HOH A 2 1102 1102 HOH HOH . J 6 HOH A 3 1103 1103 HOH HOH . J 6 HOH A 4 1104 1104 HOH HOH . J 6 HOH A 5 1105 1105 HOH HOH . J 6 HOH A 6 1106 1106 HOH HOH . J 6 HOH A 7 1107 1107 HOH HOH . J 6 HOH A 8 1108 1108 HOH HOH . J 6 HOH A 9 1109 1109 HOH HOH . J 6 HOH A 10 1110 1110 HOH HOH . J 6 HOH A 11 1111 1111 HOH HOH . J 6 HOH A 12 1112 1112 HOH HOH . J 6 HOH A 13 1113 1113 HOH HOH . J 6 HOH A 14 1114 1114 HOH HOH . J 6 HOH A 15 1115 1115 HOH HOH . J 6 HOH A 16 1116 1116 HOH HOH . J 6 HOH A 17 1117 1117 HOH HOH . J 6 HOH A 18 1118 1118 HOH HOH . J 6 HOH A 19 1119 1119 HOH HOH . J 6 HOH A 20 1120 1120 HOH HOH . J 6 HOH A 21 1121 1121 HOH HOH . J 6 HOH A 22 1122 1122 HOH HOH . J 6 HOH A 23 1123 1123 HOH HOH . J 6 HOH A 24 1124 1124 HOH HOH . J 6 HOH A 25 1125 1125 HOH HOH . J 6 HOH A 26 1126 1126 HOH HOH . J 6 HOH A 27 1127 1127 HOH HOH . J 6 HOH A 28 1128 1128 HOH HOH . J 6 HOH A 29 1129 1129 HOH HOH . J 6 HOH A 30 1130 1130 HOH HOH . J 6 HOH A 31 1131 1131 HOH HOH . J 6 HOH A 32 1132 1132 HOH HOH . J 6 HOH A 33 1133 1133 HOH HOH . J 6 HOH A 34 1134 1134 HOH HOH . J 6 HOH A 35 1135 1135 HOH HOH . J 6 HOH A 36 1136 1136 HOH HOH . J 6 HOH A 37 1137 1137 HOH HOH . J 6 HOH A 38 1138 1138 HOH HOH . J 6 HOH A 39 1139 1139 HOH HOH . J 6 HOH A 40 1140 1140 HOH HOH . J 6 HOH A 41 1141 1141 HOH HOH . J 6 HOH A 42 1142 1142 HOH HOH . J 6 HOH A 43 1143 1143 HOH HOH . J 6 HOH A 44 1144 1144 HOH HOH . J 6 HOH A 45 1145 1145 HOH HOH . J 6 HOH A 46 1146 1146 HOH HOH . J 6 HOH A 47 1147 1147 HOH HOH . J 6 HOH A 48 1148 1148 HOH HOH . J 6 HOH A 49 1149 1149 HOH HOH . J 6 HOH A 50 1150 1150 HOH HOH . J 6 HOH A 51 1151 1151 HOH HOH . J 6 HOH A 52 1152 1152 HOH HOH . J 6 HOH A 53 1153 1153 HOH HOH . J 6 HOH A 54 1154 1154 HOH HOH . J 6 HOH A 55 1155 1155 HOH HOH . J 6 HOH A 56 1156 1156 HOH HOH . J 6 HOH A 57 1157 1157 HOH HOH . J 6 HOH A 58 1158 1158 HOH HOH . J 6 HOH A 59 1159 1159 HOH HOH . J 6 HOH A 60 1160 1160 HOH HOH . J 6 HOH A 61 1161 1161 HOH HOH . J 6 HOH A 62 1162 1162 HOH HOH . J 6 HOH A 63 1163 1163 HOH HOH . J 6 HOH A 64 1164 1164 HOH HOH . J 6 HOH A 65 1165 1165 HOH HOH . J 6 HOH A 66 1166 1166 HOH HOH . J 6 HOH A 67 1167 1167 HOH HOH . J 6 HOH A 68 1168 1168 HOH HOH . J 6 HOH A 69 1169 1169 HOH HOH . J 6 HOH A 70 1170 1170 HOH HOH . J 6 HOH A 71 1171 1171 HOH HOH . J 6 HOH A 72 1172 1172 HOH HOH . J 6 HOH A 73 1173 1173 HOH HOH . J 6 HOH A 74 1174 1174 HOH HOH . J 6 HOH A 75 1175 1175 HOH HOH . J 6 HOH A 76 1176 1176 HOH HOH . J 6 HOH A 77 1177 1177 HOH HOH . J 6 HOH A 78 1178 1178 HOH HOH . J 6 HOH A 79 1179 1179 HOH HOH . J 6 HOH A 80 1180 1180 HOH HOH . J 6 HOH A 81 1181 1181 HOH HOH . J 6 HOH A 82 1182 1182 HOH HOH . J 6 HOH A 83 1183 1183 HOH HOH . J 6 HOH A 84 1184 1184 HOH HOH . J 6 HOH A 85 1185 1185 HOH HOH . J 6 HOH A 86 1186 1186 HOH HOH . J 6 HOH A 87 1187 1187 HOH HOH . J 6 HOH A 88 1188 1188 HOH HOH . J 6 HOH A 89 1189 1189 HOH HOH . J 6 HOH A 90 1190 1190 HOH HOH . J 6 HOH A 91 1191 1191 HOH HOH . J 6 HOH A 92 1192 1192 HOH HOH . J 6 HOH A 93 1193 1193 HOH HOH . J 6 HOH A 94 1194 1194 HOH HOH . J 6 HOH A 95 1195 1195 HOH HOH . J 6 HOH A 96 1196 1196 HOH HOH . J 6 HOH A 97 1197 1197 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C6F . . . B 2 -28.205 -1.584 -27.711 1 61.22 ? C1 C6F 1001 A 1 HETATM 2 C C2 C6F . . . B 2 -28.087 -2.901 -26.918 1 61.39 ? C2 C6F 1001 A 1 HETATM 3 C C3 C6F . . . B 2 -28.157 -4.152 -27.781 1 57.49 ? C3 C6F 1001 A 1 HETATM 4 C C5 C6F . . . B 2 -27.981 -5.045 -29.968 1 55.41 ? C5 C6F 1001 A 1 HETATM 5 C C6 C6F . . . B 2 -27.691 -4.664 -31.374 1 51.75 ? C6 C6F 1001 A 1 HETATM 6 N N10 C6F . . . B 2 -28.282 -7.483 -30.381 1 56.35 ? N10 C6F 1001 A 1 HETATM 7 C C11 C6F . . . B 2 -28.364 -8.895 -30.142 1 59.31 ? C11 C6F 1001 A 1 HETATM 8 C C12 C6F . . . B 2 -28.178 -9.746 -31.259 1 59.6 ? C12 C6F 1001 A 1 HETATM 9 C C16 C6F . . . B 2 -29.619 -13.936 -30.527 1 95.25 ? C16 C6F 1001 A 1 HETATM 10 C C17 C6F . . . B 2 -28.98 -15.118 -31.291 1 110.12 ? C17 C6F 1001 A 1 HETATM 11 C C18 C6F . . . B 2 -28.108 -15.943 -30.323 1 127.15 ? C18 C6F 1001 A 1 HETATM 12 C C19 C6F . . . B 2 -26.958 -15.032 -29.845 1 110.42 ? C19 C6F 1001 A 1 HETATM 13 C C23 C6F . . . B 2 -26.393 -18.528 -32.638 1 145.87 ? C23 C6F 1001 A 1 HETATM 14 C C27 C6F . . . B 2 -27.35 -18.279 -29.908 1 133.41 ? C27 C6F 1001 A 1 HETATM 15 O O29 C6F . . . B 2 -28.973 -11.464 -27.565 1 78.74 ? O29 C6F 1001 A 1 HETATM 16 C C30 C6F . . . B 2 -30.314 -11.879 -27.299 1 82.68 ? C30 C6F 1001 A 1 HETATM 17 C C31 C6F . . . B 2 -28.645 -9.529 -28.91 1 65.98 ? C31 C6F 1001 A 1 HETATM 18 C C33 C6F . . . B 2 -28.417 -5.457 -27.275 1 63.54 ? C33 C6F 1001 A 1 HETATM 19 C C35 C6F . . . B 2 -28.681 -7.046 -25.327 1 73.92 ? C35 C6F 1001 A 1 HETATM 20 C C36 C6F . . . B 2 -29.231 -6.995 -23.898 1 83.88 ? C36 C6F 1001 A 1 HETATM 21 C C37 C6F . . . B 2 -29.376 -8.44 -23.403 1 87.04 ? C37 C6F 1001 A 1 HETATM 22 C C39 C6F . . . B 2 -27.249 -8.989 -24.547 1 76.77 ? C39 C6F 1001 A 1 HETATM 23 C C40 C6F . . . B 2 -27.262 -7.622 -25.257 1 81.97 ? C40 C6F 1001 A 1 HETATM 24 N N4 C6F . . . B 2 -27.949 -4.03 -29.085 1 55.35 ? N4 C6F 1001 A 1 HETATM 25 O O7 C6F . . . B 2 -27.632 -5.511 -32.244 1 41.77 ? O7 C6F 1001 A 1 HETATM 26 N N8 C6F . . . B 2 -27.437 -3.38 -31.714 1 45.53 ? N8 C6F 1001 A 1 HETATM 27 C C9 C6F . . . B 2 -28.228 -6.382 -29.492 1 50.73 ? C9 C6F 1001 A 1 HETATM 28 C C13 C6F . . . B 2 -28.253 -11.133 -31.156 1 64.26 ? C13 C6F 1001 A 1 HETATM 29 C C14 C6F . . . B 2 -28.519 -11.742 -29.927 1 75.34 ? C14 C6F 1001 A 1 HETATM 30 N N15 C6F . . . B 2 -28.569 -13.149 -29.837 1 85.46 ? N15 C6F 1001 A 1 HETATM 31 C C20 C6F . . . B 2 -27.548 -13.867 -29.035 1 83.15 ? C20 C6F 1001 A 1 HETATM 32 N N21 C6F . . . B 2 -27.641 -17.23 -30.922 1 138.39 ? N21 C6F 1001 A 1 HETATM 33 C C22 C6F . . . B 2 -26.599 -17.151 -31.983 1 140.85 ? C22 C6F 1001 A 1 HETATM 34 N N24 C6F . . . B 2 -26.034 -19.527 -31.607 1 140.07 ? N24 C6F 1001 A 1 HETATM 35 C C25 C6F . . . B 2 -25.576 -20.82 -32.163 1 120.45 ? C25 C6F 1001 A 1 HETATM 36 C C26 C6F . . . B 2 -27.079 -19.647 -30.565 1 132.35 ? C26 C6F 1001 A 1 HETATM 37 C C28 C6F . . . B 2 -28.714 -10.925 -28.795 1 72.93 ? C28 C6F 1001 A 1 HETATM 38 N N32 C6F . . . B 2 -28.449 -6.486 -28.164 1 59.65 ? N32 C6F 1001 A 1 HETATM 39 N N34 C6F . . . B 2 -28.655 -5.694 -25.911 1 72.23 ? N34 C6F 1001 A 1 HETATM 40 O O38 C6F . . . B 2 -28.091 -9.076 -23.385 1 72.69 ? O38 C6F 1001 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 472 _model_server_stats.encode_time_ms 77 _model_server_stats.element_count 40 #