data_6JR5
#
_model_server_result.job_id            oyni6qQrMonnHvl-UyYONQ 
_model_server_result.datetime_utc      '2025-01-11 01:53:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jr5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    6JR5 
#
_exptl.entry_id    6JR5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JR5 
_cell.length_a            74.61 
_cell.length_b            91.68 
_cell.length_c            113.64 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JR5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 F N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     6JR5 
_atom_sites.fract_transf_matrix[1][1]    0.013403 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010908 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.0088 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZHB A 1 301 301 ZHB ZHB . 
D 3 GOL A 1 302 302 GOL GOL . 
E 2 ZHB B 1 301 301 ZHB ZHB . 
F 3 GOL B 1 302 302 GOL GOL . 
G 4 HOH A 1 401 476 HOH HOH . 
G 4 HOH A 2 402 452 HOH HOH . 
G 4 HOH A 3 403 507 HOH HOH . 
G 4 HOH A 4 404 428 HOH HOH . 
G 4 HOH A 5 405 486 HOH HOH . 
G 4 HOH A 6 406 462 HOH HOH . 
G 4 HOH A 7 407 412 HOH HOH . 
G 4 HOH A 8 408 422 HOH HOH . 
G 4 HOH A 9 409 451 HOH HOH . 
G 4 HOH A 10 410 475 HOH HOH . 
G 4 HOH A 11 411 446 HOH HOH . 
G 4 HOH A 12 412 436 HOH HOH . 
G 4 HOH A 13 413 434 HOH HOH . 
G 4 HOH A 14 414 463 HOH HOH . 
G 4 HOH A 15 415 448 HOH HOH . 
G 4 HOH A 16 416 401 HOH HOH . 
G 4 HOH A 17 417 427 HOH HOH . 
G 4 HOH A 18 418 402 HOH HOH . 
G 4 HOH A 19 419 485 HOH HOH . 
G 4 HOH A 20 420 484 HOH HOH . 
G 4 HOH A 21 421 477 HOH HOH . 
G 4 HOH A 22 422 416 HOH HOH . 
G 4 HOH A 23 423 497 HOH HOH . 
G 4 HOH A 24 424 426 HOH HOH . 
G 4 HOH A 25 425 413 HOH HOH . 
G 4 HOH A 26 426 465 HOH HOH . 
G 4 HOH A 27 427 419 HOH HOH . 
G 4 HOH A 28 428 453 HOH HOH . 
G 4 HOH A 29 429 441 HOH HOH . 
G 4 HOH A 30 430 449 HOH HOH . 
G 4 HOH A 31 431 423 HOH HOH . 
G 4 HOH A 32 432 510 HOH HOH . 
G 4 HOH A 33 433 472 HOH HOH . 
G 4 HOH A 34 434 503 HOH HOH . 
G 4 HOH A 35 435 435 HOH HOH . 
G 4 HOH A 36 436 406 HOH HOH . 
G 4 HOH A 37 437 411 HOH HOH . 
G 4 HOH A 38 438 456 HOH HOH . 
G 4 HOH A 39 439 489 HOH HOH . 
G 4 HOH A 40 440 509 HOH HOH . 
G 4 HOH A 41 441 408 HOH HOH . 
G 4 HOH A 42 442 404 HOH HOH . 
G 4 HOH A 43 443 407 HOH HOH . 
G 4 HOH A 44 444 460 HOH HOH . 
G 4 HOH A 45 445 405 HOH HOH . 
G 4 HOH A 46 446 417 HOH HOH . 
G 4 HOH A 47 447 470 HOH HOH . 
G 4 HOH A 48 448 432 HOH HOH . 
G 4 HOH A 49 449 439 HOH HOH . 
G 4 HOH A 50 450 410 HOH HOH . 
G 4 HOH A 51 451 492 HOH HOH . 
G 4 HOH A 52 452 444 HOH HOH . 
G 4 HOH A 53 453 430 HOH HOH . 
G 4 HOH A 54 454 461 HOH HOH . 
G 4 HOH A 55 455 445 HOH HOH . 
G 4 HOH A 56 456 504 HOH HOH . 
G 4 HOH A 57 457 501 HOH HOH . 
G 4 HOH A 58 458 421 HOH HOH . 
G 4 HOH A 59 459 447 HOH HOH . 
G 4 HOH A 60 460 415 HOH HOH . 
G 4 HOH A 61 461 459 HOH HOH . 
G 4 HOH A 62 462 455 HOH HOH . 
G 4 HOH A 63 463 431 HOH HOH . 
G 4 HOH A 64 464 493 HOH HOH . 
G 4 HOH A 65 465 466 HOH HOH . 
G 4 HOH A 66 466 491 HOH HOH . 
G 4 HOH A 67 467 469 HOH HOH . 
G 4 HOH A 68 468 458 HOH HOH . 
G 4 HOH A 69 469 464 HOH HOH . 
G 4 HOH A 70 470 490 HOH HOH . 
G 4 HOH A 71 471 433 HOH HOH . 
G 4 HOH A 72 472 480 HOH HOH . 
G 4 HOH A 73 473 457 HOH HOH . 
G 4 HOH A 74 474 442 HOH HOH . 
G 4 HOH A 75 475 414 HOH HOH . 
G 4 HOH A 76 476 473 HOH HOH . 
G 4 HOH A 77 477 450 HOH HOH . 
G 4 HOH A 78 478 409 HOH HOH . 
G 4 HOH A 79 479 429 HOH HOH . 
G 4 HOH A 80 480 474 HOH HOH . 
G 4 HOH A 81 481 502 HOH HOH . 
G 4 HOH A 82 482 454 HOH HOH . 
G 4 HOH A 83 483 443 HOH HOH . 
G 4 HOH A 84 484 437 HOH HOH . 
G 4 HOH A 85 485 500 HOH HOH . 
G 4 HOH A 86 486 481 HOH HOH . 
G 4 HOH A 87 487 508 HOH HOH . 
G 4 HOH A 88 488 418 HOH HOH . 
G 4 HOH A 89 489 440 HOH HOH . 
G 4 HOH A 90 490 487 HOH HOH . 
G 4 HOH A 91 491 482 HOH HOH . 
G 4 HOH A 92 492 438 HOH HOH . 
G 4 HOH A 93 493 468 HOH HOH . 
G 4 HOH A 94 494 479 HOH HOH . 
G 4 HOH A 95 495 420 HOH HOH . 
G 4 HOH A 96 496 494 HOH HOH . 
G 4 HOH A 97 497 506 HOH HOH . 
G 4 HOH A 98 498 403 HOH HOH . 
G 4 HOH A 99 499 488 HOH HOH . 
G 4 HOH A 100 500 424 HOH HOH . 
G 4 HOH A 101 501 496 HOH HOH . 
G 4 HOH A 102 502 499 HOH HOH . 
G 4 HOH A 103 503 498 HOH HOH . 
G 4 HOH A 104 504 505 HOH HOH . 
G 4 HOH A 105 505 495 HOH HOH . 
G 4 HOH A 106 506 471 HOH HOH . 
G 4 HOH A 107 507 467 HOH HOH . 
G 4 HOH A 108 508 483 HOH HOH . 
G 4 HOH A 109 509 478 HOH HOH . 
H 4 HOH B 1 401 419 HOH HOH . 
H 4 HOH B 2 402 456 HOH HOH . 
H 4 HOH B 3 403 444 HOH HOH . 
H 4 HOH B 4 404 402 HOH HOH . 
H 4 HOH B 5 405 418 HOH HOH . 
H 4 HOH B 6 406 465 HOH HOH . 
H 4 HOH B 7 407 437 HOH HOH . 
H 4 HOH B 8 408 420 HOH HOH . 
H 4 HOH B 9 409 409 HOH HOH . 
H 4 HOH B 10 410 436 HOH HOH . 
H 4 HOH B 11 411 495 HOH HOH . 
H 4 HOH B 12 412 429 HOH HOH . 
H 4 HOH B 13 413 505 HOH HOH . 
H 4 HOH B 14 414 481 HOH HOH . 
H 4 HOH B 15 415 463 HOH HOH . 
H 4 HOH B 16 416 425 HOH HOH . 
H 4 HOH B 17 417 440 HOH HOH . 
H 4 HOH B 18 418 458 HOH HOH . 
H 4 HOH B 19 419 422 HOH HOH . 
H 4 HOH B 20 420 423 HOH HOH . 
H 4 HOH B 21 421 415 HOH HOH . 
H 4 HOH B 22 422 430 HOH HOH . 
H 4 HOH B 23 423 475 HOH HOH . 
H 4 HOH B 24 424 406 HOH HOH . 
H 4 HOH B 25 425 501 HOH HOH . 
H 4 HOH B 26 426 438 HOH HOH . 
H 4 HOH B 27 427 472 HOH HOH . 
H 4 HOH B 28 428 431 HOH HOH . 
H 4 HOH B 29 429 486 HOH HOH . 
H 4 HOH B 30 430 413 HOH HOH . 
H 4 HOH B 31 431 468 HOH HOH . 
H 4 HOH B 32 432 470 HOH HOH . 
H 4 HOH B 33 433 448 HOH HOH . 
H 4 HOH B 34 434 433 HOH HOH . 
H 4 HOH B 35 435 447 HOH HOH . 
H 4 HOH B 36 436 479 HOH HOH . 
H 4 HOH B 37 437 480 HOH HOH . 
H 4 HOH B 38 438 404 HOH HOH . 
H 4 HOH B 39 439 455 HOH HOH . 
H 4 HOH B 40 440 442 HOH HOH . 
H 4 HOH B 41 441 474 HOH HOH . 
H 4 HOH B 42 442 411 HOH HOH . 
H 4 HOH B 43 443 466 HOH HOH . 
H 4 HOH B 44 444 499 HOH HOH . 
H 4 HOH B 45 445 405 HOH HOH . 
H 4 HOH B 46 446 451 HOH HOH . 
H 4 HOH B 47 447 459 HOH HOH . 
H 4 HOH B 48 448 407 HOH HOH . 
H 4 HOH B 49 449 435 HOH HOH . 
H 4 HOH B 50 450 403 HOH HOH . 
H 4 HOH B 51 451 477 HOH HOH . 
H 4 HOH B 52 452 401 HOH HOH . 
H 4 HOH B 53 453 500 HOH HOH . 
H 4 HOH B 54 454 441 HOH HOH . 
H 4 HOH B 55 455 428 HOH HOH . 
H 4 HOH B 56 456 453 HOH HOH . 
H 4 HOH B 57 457 460 HOH HOH . 
H 4 HOH B 58 458 452 HOH HOH . 
H 4 HOH B 59 459 443 HOH HOH . 
H 4 HOH B 60 460 421 HOH HOH . 
H 4 HOH B 61 461 416 HOH HOH . 
H 4 HOH B 62 462 414 HOH HOH . 
H 4 HOH B 63 463 457 HOH HOH . 
H 4 HOH B 64 464 473 HOH HOH . 
H 4 HOH B 65 465 496 HOH HOH . 
H 4 HOH B 66 466 504 HOH HOH . 
H 4 HOH B 67 467 424 HOH HOH . 
H 4 HOH B 68 468 503 HOH HOH . 
H 4 HOH B 69 469 450 HOH HOH . 
H 4 HOH B 70 470 462 HOH HOH . 
H 4 HOH B 71 471 446 HOH HOH . 
H 4 HOH B 72 472 461 HOH HOH . 
H 4 HOH B 73 473 498 HOH HOH . 
H 4 HOH B 74 474 487 HOH HOH . 
H 4 HOH B 75 475 445 HOH HOH . 
H 4 HOH B 76 476 408 HOH HOH . 
H 4 HOH B 77 477 454 HOH HOH . 
H 4 HOH B 78 478 490 HOH HOH . 
H 4 HOH B 79 479 502 HOH HOH . 
H 4 HOH B 80 480 492 HOH HOH . 
H 4 HOH B 81 481 417 HOH HOH . 
H 4 HOH B 82 482 469 HOH HOH . 
H 4 HOH B 83 483 493 HOH HOH . 
H 4 HOH B 84 484 494 HOH HOH . 
H 4 HOH B 85 485 449 HOH HOH . 
H 4 HOH B 86 486 478 HOH HOH . 
H 4 HOH B 87 487 427 HOH HOH . 
H 4 HOH B 88 488 471 HOH HOH . 
H 4 HOH B 89 489 412 HOH HOH . 
H 4 HOH B 90 490 476 HOH HOH . 
H 4 HOH B 91 491 410 HOH HOH . 
H 4 HOH B 92 492 484 HOH HOH . 
H 4 HOH B 93 493 439 HOH HOH . 
H 4 HOH B 94 494 489 HOH HOH . 
H 4 HOH B 95 495 483 HOH HOH . 
H 4 HOH B 96 496 426 HOH HOH . 
H 4 HOH B 97 497 432 HOH HOH . 
H 4 HOH B 98 498 464 HOH HOH . 
H 4 HOH B 99 499 485 HOH HOH . 
H 4 HOH B 100 500 488 HOH HOH . 
H 4 HOH B 101 501 497 HOH HOH . 
H 4 HOH B 102 502 434 HOH HOH . 
H 4 HOH B 103 503 482 HOH HOH . 
H 4 HOH B 104 504 467 HOH HOH . 
H 4 HOH B 105 505 425 HOH HOH . 
H 4 HOH B 106 506 491 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 -28.806 10.128 -0.281 1 49.36 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . D 3 -30.051 10.064 0.408 1 54.33 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . D 3 -28.533 11.525 -0.769 1 48.32 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . D 3 -28.395 12.388 0.362 1 53.56 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . D 3 -27.318 11.576 -1.669 1 49.43 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . D 3 -27.437 12.591 -2.658 1 58.11 ? O3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#