data_6JRK # _model_server_result.job_id rBSW6kyc3xRjF_5ORljGjw _model_server_result.datetime_utc '2024-11-23 00:26:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jrk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6JRK # _exptl.entry_id 6JRK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 632.171 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(2-chloranyl-3-fluoranyl-phenyl)-5-methyl-2-[[3-methyl-4-(4-methylpiperazin-1-yl)phenyl]amino]-8-[(3S)-1-propanoylpiperidin-3-yl]pyrido[2,3-d]pyrimidin-7-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JRK _cell.length_a 146.542 _cell.length_b 146.542 _cell.length_c 146.542 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JRK _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C34 H39 Cl F N7 O2' _chem_comp.formula_weight 632.171 _chem_comp.id C6O _chem_comp.mon_nstd_flag . _chem_comp.name 6-(2-chloranyl-3-fluoranyl-phenyl)-5-methyl-2-[[3-methyl-4-(4-methylpiperazin-1-yl)phenyl]amino]-8-[(3S)-1-propanoylpiperidin-3-yl]pyrido[2,3-d]pyrimidin-7-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C41 C6O sing 70 n n C43 C41 C6O doub 71 n y C43 C44 C6O sing 72 n y C41 C39 C6O sing 73 n y C44 C45 C6O doub 74 n y C39 CL1 C6O sing 75 n n C39 C38 C6O doub 76 n y C45 C38 C6O sing 77 n y C38 C37 C6O sing 78 n n C36 C35 C6O sing 79 n n C37 C35 C6O doub 80 n n C37 C02 C6O sing 81 n n O01 C02 C6O doub 82 n n C35 C34 C6O sing 83 n n C02 N03 C6O sing 84 n n C34 C33 C6O doub 85 n y C34 C14 C6O sing 86 n y N03 C04 C6O sing 87 n n N03 C14 C6O sing 88 n n C33 N32 C6O sing 89 n y C04 C13 C6O sing 90 n n C04 C05 C6O sing 91 n n C14 N15 C6O doub 92 n y C13 N08 C6O sing 93 n n C05 C06 C6O sing 94 n n N32 C16 C6O doub 95 n y N08 C07 C6O sing 96 n n N08 C09 C6O sing 97 n n N15 C16 C6O sing 98 n y C07 C06 C6O sing 99 n n C16 N17 C6O sing 100 n n C10 C11 C6O sing 101 n n C10 C09 C6O sing 102 n n C09 O12 C6O doub 103 n n N17 C18 C6O sing 104 n n C31 C18 C6O doub 105 n y C31 C30 C6O sing 106 n y C18 C19 C6O sing 107 n y C30 C22 C6O doub 108 n y C19 C20 C6O doub 109 n y C22 C20 C6O sing 110 n y C22 N23 C6O sing 111 n n C20 C21 C6O sing 112 n n C24 N23 C6O sing 113 n n C24 C25 C6O sing 114 n n N23 C29 C6O sing 115 n n C25 N26 C6O sing 116 n n N26 C27 C6O sing 117 n n N26 C28 C6O sing 118 n n C29 C28 C6O sing 119 n n C11 H1 C6O sing 120 n n C11 H2 C6O sing 121 n n C11 H3 C6O sing 122 n n C10 H4 C6O sing 123 n n C10 H5 C6O sing 124 n n C13 H6 C6O sing 125 n n C13 H7 C6O sing 126 n n C04 H8 C6O sing 127 n n C05 H9 C6O sing 128 n n C05 H10 C6O sing 129 n n C06 H11 C6O sing 130 n n C06 H12 C6O sing 131 n n C07 H13 C6O sing 132 n n C07 H14 C6O sing 133 n n C19 H15 C6O sing 134 n n C21 H16 C6O sing 135 n n C21 H17 C6O sing 136 n n C21 H18 C6O sing 137 n n C24 H19 C6O sing 138 n n C24 H20 C6O sing 139 n n C25 H21 C6O sing 140 n n C25 H22 C6O sing 141 n n C27 H23 C6O sing 142 n n C27 H24 C6O sing 143 n n C27 H25 C6O sing 144 n n C28 H26 C6O sing 145 n n C28 H27 C6O sing 146 n n C29 H28 C6O sing 147 n n C29 H29 C6O sing 148 n n C30 H30 C6O sing 149 n n C31 H31 C6O sing 150 n n C33 H32 C6O sing 151 n n C36 H33 C6O sing 152 n n C36 H34 C6O sing 153 n n C36 H35 C6O sing 154 n n C43 H36 C6O sing 155 n n C44 H37 C6O sing 156 n n C45 H38 C6O sing 157 n n N17 H39 C6O sing 158 n n # _atom_sites.entry_id 6JRK _atom_sites.fract_transf_matrix[1][1] 0.006824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 C6O A 1 1101 1 C6O DRG . C 3 HOH A 1 1201 23 HOH HOH . C 3 HOH A 2 1202 17 HOH HOH . C 3 HOH A 3 1203 16 HOH HOH . C 3 HOH A 4 1204 14 HOH HOH . C 3 HOH A 5 1205 13 HOH HOH . C 3 HOH A 6 1206 8 HOH HOH . C 3 HOH A 7 1207 10 HOH HOH . C 3 HOH A 8 1208 5 HOH HOH . C 3 HOH A 9 1209 3 HOH HOH . C 3 HOH A 10 1210 25 HOH HOH . C 3 HOH A 11 1211 6 HOH HOH . C 3 HOH A 12 1212 9 HOH HOH . C 3 HOH A 13 1213 7 HOH HOH . C 3 HOH A 14 1214 24 HOH HOH . C 3 HOH A 15 1215 15 HOH HOH . C 3 HOH A 16 1216 22 HOH HOH . C 3 HOH A 17 1217 20 HOH HOH . C 3 HOH A 18 1218 4 HOH HOH . C 3 HOH A 19 1219 12 HOH HOH . C 3 HOH A 20 1220 21 HOH HOH . C 3 HOH A 21 1221 19 HOH HOH . C 3 HOH A 22 1222 11 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 C6O . . . B 2 -52.332 0.931 -22.925 1 67.06 ? C14 C6O 1101 A 1 HETATM 2 C C11 C6O . . . B 2 -50.575 -5.096 -21.983 1 79.69 ? C11 C6O 1101 A 1 HETATM 3 C C10 C6O . . . B 2 -50.517 -4.004 -20.913 1 81.23 ? C10 C6O 1101 A 1 HETATM 4 C C13 C6O . . . B 2 -49.863 -1.805 -23.003 1 71.86 ? C13 C6O 1101 A 1 HETATM 5 C C02 C6O . . . B 2 -51.245 0.083 -25.167 1 76.85 ? C02 C6O 1101 A 1 HETATM 6 C C04 C6O . . . B 2 -49.824 -0.255 -23.15 1 74.52 ? C04 C6O 1101 A 1 HETATM 7 C C05 C6O . . . B 2 -49.359 0.464 -21.97 1 76.52 ? C05 C6O 1101 A 1 HETATM 8 C C06 C6O . . . B 2 -47.945 0.071 -21.612 1 77.87 ? C06 C6O 1101 A 1 HETATM 9 C C07 C6O . . . B 2 -47.665 -1.398 -21.991 1 75.01 ? C07 C6O 1101 A 1 HETATM 10 C C09 C6O . . . B 2 -49.196 -3.258 -20.872 1 87.58 ? C09 C6O 1101 A 1 HETATM 11 C C16 C6O . . . B 2 -53.375 1.735 -20.942 1 62.89 ? C16 C6O 1101 A 1 HETATM 12 C C18 C6O . . . B 2 -52.313 1.419 -18.507 1 66.31 ? C18 C6O 1101 A 1 HETATM 13 C C19 C6O . . . B 2 -52.524 1.745 -17.165 1 60.09 ? C19 C6O 1101 A 1 HETATM 14 C C20 C6O . . . B 2 -51.661 1.335 -16.184 1 71.26 ? C20 C6O 1101 A 1 HETATM 15 C C21 C6O . . . B 2 -51.974 1.726 -14.751 1 67.73 ? C21 C6O 1101 A 1 HETATM 16 C C22 C6O . . . B 2 -50.539 0.576 -16.549 1 82.85 ? C22 C6O 1101 A 1 HETATM 17 C C24 C6O . . . B 2 -48.588 1.032 -15.035 1 82.71 ? C24 C6O 1101 A 1 HETATM 18 C C25 C6O . . . B 2 -48.496 0.945 -13.513 1 97.88 ? C25 C6O 1101 A 1 HETATM 19 C C27 C6O . . . B 2 -46.874 -0.447 -13.125 1 101.54 ? C27 C6O 1101 A 1 HETATM 20 C C28 C6O . . . B 2 -48.759 -1.386 -13.66 1 96.73 ? C28 C6O 1101 A 1 HETATM 21 C C29 C6O . . . B 2 -49.816 -1.045 -14.714 1 88.54 ? C29 C6O 1101 A 1 HETATM 22 C C30 C6O . . . B 2 -50.324 0.253 -17.898 1 78.85 ? C30 C6O 1101 A 1 HETATM 23 C C31 C6O . . . B 2 -51.2 0.661 -18.885 1 70.03 ? C31 C6O 1101 A 1 HETATM 24 C C33 C6O . . . B 2 -54.597 1.99 -22.944 1 63.87 ? C33 C6O 1101 A 1 HETATM 25 C C34 C6O . . . B 2 -53.498 1.367 -23.613 1 65.05 ? C34 C6O 1101 A 1 HETATM 26 C C35 C6O . . . B 2 -53.606 1.171 -25.127 1 68.02 ? C35 C6O 1101 A 1 HETATM 27 C C36 C6O . . . B 2 -54.856 1.627 -25.834 1 65.89 ? C36 C6O 1101 A 1 HETATM 28 C C37 C6O . . . B 2 -52.506 0.537 -25.871 1 69.88 ? C37 C6O 1101 A 1 HETATM 29 C C38 C6O . . . B 2 -52.586 0.373 -27.402 1 70.7 ? C38 C6O 1101 A 1 HETATM 30 C C39 C6O . . . B 2 -52.131 1.476 -28.138 1 77.82 ? C39 C6O 1101 A 1 HETATM 31 C C41 C6O . . . B 2 -52.145 1.435 -29.52 1 81.8 ? C41 C6O 1101 A 1 HETATM 32 C C43 C6O . . . B 2 -52.606 0.264 -30.148 1 82.27 ? C43 C6O 1101 A 1 HETATM 33 C C44 C6O . . . B 2 -53.05 -0.836 -29.407 1 80.75 ? C44 C6O 1101 A 1 HETATM 34 C C45 C6O . . . B 2 -53.042 -0.802 -28.022 1 73.26 ? C45 C6O 1101 A 1 HETATM 35 F F1 C6O . . . B 2 -51.728 2.482 -30.265 1 82.79 ? F1 C6O 1101 A 1 HETATM 36 N N03 C6O . . . B 2 -51.147 0.255 -23.717 1 74.68 ? N03 C6O 1101 A 1 HETATM 37 N N08 C6O . . . B 2 -48.907 -2.202 -21.907 1 80.38 ? N08 C6O 1101 A 1 HETATM 38 N N15 C6O . . . B 2 -52.326 1.135 -21.554 1 64.15 ? N15 C6O 1101 A 1 HETATM 39 N N17 C6O . . . B 2 -53.338 1.945 -19.433 1 64.07 ? N17 C6O 1101 A 1 HETATM 40 N N23 C6O . . . B 2 -49.534 0.087 -15.589 1 81.75 ? N23 C6O 1101 A 1 HETATM 41 N N26 C6O . . . B 2 -48.168 -0.307 -13.038 1 106.11 ? N26 C6O 1101 A 1 HETATM 42 N N32 C6O . . . B 2 -54.511 2.177 -21.586 1 60.7 ? N32 C6O 1101 A 1 HETATM 43 O O01 C6O . . . B 2 -50.379 -0.417 -25.799 1 81.63 ? O01 C6O 1101 A 1 HETATM 44 O O12 C6O . . . B 2 -48.37 -3.484 -20.03 1 85.25 ? O12 C6O 1101 A 1 HETATM 45 CL CL1 C6O . . . B 2 -51.523 2.948 -27.286 1 75.1 ? CL1 C6O 1101 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 45 #