data_6JSF # _model_server_result.job_id afYEDUrK6t9T8Any0qzuEA _model_server_result.datetime_utc '2024-11-24 13:37:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jsf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":510}' # _entry.id 6JSF # _exptl.entry_id 6JSF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 469.507 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-[(4S,5S)-2-azanyl-4-methyl-5-phenyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-5-(fluoranylmethoxy)pyrazine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6JSF _cell.length_a 102.535 _cell.length_b 102.535 _cell.length_c 170.35 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JSF _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 178 A CYS 179 1_555 A SG CYS 382 A CYS 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? disulf ? disulf2 A SG CYS 240 A CYS 241 1_555 A SG CYS 405 A CYS 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? disulf ? disulf3 A SG CYS 292 A CYS 293 1_555 A SG CYS 342 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C23 H21 F2 N5 O2 S' _chem_comp.formula_weight 469.507 _chem_comp.id C7X _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-[(4S,5S)-2-azanyl-4-methyl-5-phenyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-5-(fluoranylmethoxy)pyrazine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 C20 C7X doub 70 n y C21 C22 C7X sing 71 n y C20 C19 C7X sing 72 n y C22 C16 C7X doub 73 n y C19 C18 C7X doub 74 n y C16 C18 C7X sing 75 n y C16 C7 C7X sing 76 n n C7 C8 C7X sing 77 n n C7 C6 C7X sing 78 n n F C3 C7X sing 79 n n C8 S C7X sing 80 n n C15 C6 C7X sing 81 n n C6 C4 C7X sing 82 n n C6 N C7X sing 83 n n C3 C4 C7X doub 84 n y C3 C2 C7X sing 85 n y S C9 C7X sing 86 n n C4 C5 C7X sing 87 n y C2 C1 C7X doub 88 n y N C9 C7X doub 89 n n C9 N1 C7X sing 90 n n C5 C C7X doub 91 n y C1 C C7X sing 92 n y C N2 C7X sing 93 n n N2 C10 C7X sing 94 n n O C10 C7X doub 95 n n C10 C11 C7X sing 96 n n C11 C14 C7X doub 97 n y C11 N3 C7X sing 98 n y C14 N4 C7X sing 99 n y N3 C12 C7X doub 100 n y N4 C13 C7X doub 101 n y C12 C13 C7X sing 102 n y C13 O1 C7X sing 103 n n O1 C17 C7X sing 104 n n C17 F1 C7X sing 105 n n C1 H1 C7X sing 106 n n C2 H2 C7X sing 107 n n C5 H3 C7X sing 108 n n C7 H4 C7X sing 109 n n N1 H5 C7X sing 110 n n N1 H6 C7X sing 111 n n N2 H7 C7X sing 112 n n C8 H8 C7X sing 113 n n C8 H9 C7X sing 114 n n C12 H10 C7X sing 115 n n C14 H11 C7X sing 116 n n C15 H12 C7X sing 117 n n C15 H13 C7X sing 118 n n C15 H14 C7X sing 119 n n C17 H15 C7X sing 120 n n C17 H16 C7X sing 121 n n C22 H17 C7X sing 122 n n C21 H18 C7X sing 123 n n C20 H19 C7X sing 124 n n C19 H20 C7X sing 125 n n C18 H21 C7X sing 126 n n # _atom_sites.entry_id 6JSF _atom_sites.fract_transf_matrix[1][1] 0.009753 _atom_sites.fract_transf_matrix[1][2] 0.005631 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011262 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00587 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 501 501 IOD IOD . C 2 IOD A 1 502 502 IOD IOD . D 2 IOD A 1 503 503 IOD IOD . E 2 IOD A 1 504 504 IOD IOD . F 2 IOD A 1 505 505 IOD IOD . G 2 IOD A 1 506 506 IOD IOD . H 2 IOD A 1 507 507 IOD IOD . I 3 DMS A 1 508 508 DMS DMS . J 3 DMS A 1 509 509 DMS DMS . K 4 C7X A 1 510 701 C7X MOL . L 5 HOH A 1 601 1081 HOH HOH . L 5 HOH A 2 602 1045 HOH HOH . L 5 HOH A 3 603 1069 HOH HOH . L 5 HOH A 4 604 1025 HOH HOH . L 5 HOH A 5 605 1003 HOH HOH . L 5 HOH A 6 606 1036 HOH HOH . L 5 HOH A 7 607 1104 HOH HOH . L 5 HOH A 8 608 1097 HOH HOH . L 5 HOH A 9 609 1057 HOH HOH . L 5 HOH A 10 610 1065 HOH HOH . L 5 HOH A 11 611 1019 HOH HOH . L 5 HOH A 12 612 1073 HOH HOH . L 5 HOH A 13 613 1010 HOH HOH . L 5 HOH A 14 614 1002 HOH HOH . L 5 HOH A 15 615 1012 HOH HOH . L 5 HOH A 16 616 1079 HOH HOH . L 5 HOH A 17 617 1084 HOH HOH . L 5 HOH A 18 618 1070 HOH HOH . L 5 HOH A 19 619 1064 HOH HOH . L 5 HOH A 20 620 1043 HOH HOH . L 5 HOH A 21 621 1089 HOH HOH . L 5 HOH A 22 622 1083 HOH HOH . L 5 HOH A 23 623 1032 HOH HOH . L 5 HOH A 24 624 1135 HOH HOH . L 5 HOH A 25 625 1088 HOH HOH . L 5 HOH A 26 626 1143 HOH HOH . L 5 HOH A 27 627 1147 HOH HOH . L 5 HOH A 28 628 1091 HOH HOH . L 5 HOH A 29 629 1082 HOH HOH . L 5 HOH A 30 630 1100 HOH HOH . L 5 HOH A 31 631 1105 HOH HOH . L 5 HOH A 32 632 1062 HOH HOH . L 5 HOH A 33 633 1029 HOH HOH . L 5 HOH A 34 634 1023 HOH HOH . L 5 HOH A 35 635 1108 HOH HOH . L 5 HOH A 36 636 1042 HOH HOH . L 5 HOH A 37 637 1016 HOH HOH . L 5 HOH A 38 638 1008 HOH HOH . L 5 HOH A 39 639 1006 HOH HOH . L 5 HOH A 40 640 1007 HOH HOH . L 5 HOH A 41 641 1116 HOH HOH . L 5 HOH A 42 642 1106 HOH HOH . L 5 HOH A 43 643 1056 HOH HOH . L 5 HOH A 44 644 1015 HOH HOH . L 5 HOH A 45 645 1018 HOH HOH . L 5 HOH A 46 646 1013 HOH HOH . L 5 HOH A 47 647 1114 HOH HOH . L 5 HOH A 48 648 1077 HOH HOH . L 5 HOH A 49 649 1126 HOH HOH . L 5 HOH A 50 650 1087 HOH HOH . L 5 HOH A 51 651 1110 HOH HOH . L 5 HOH A 52 652 1072 HOH HOH . L 5 HOH A 53 653 1094 HOH HOH . L 5 HOH A 54 654 1144 HOH HOH . L 5 HOH A 55 655 1044 HOH HOH . L 5 HOH A 56 656 1005 HOH HOH . L 5 HOH A 57 657 1148 HOH HOH . L 5 HOH A 58 658 1035 HOH HOH . L 5 HOH A 59 659 1020 HOH HOH . L 5 HOH A 60 660 1080 HOH HOH . L 5 HOH A 61 661 1011 HOH HOH . L 5 HOH A 62 662 1033 HOH HOH . L 5 HOH A 63 663 1053 HOH HOH . L 5 HOH A 64 664 1150 HOH HOH . L 5 HOH A 65 665 1102 HOH HOH . L 5 HOH A 66 666 1037 HOH HOH . L 5 HOH A 67 667 1051 HOH HOH . L 5 HOH A 68 668 1017 HOH HOH . L 5 HOH A 69 669 1041 HOH HOH . L 5 HOH A 70 670 1139 HOH HOH . L 5 HOH A 71 671 1086 HOH HOH . L 5 HOH A 72 672 1063 HOH HOH . L 5 HOH A 73 673 1040 HOH HOH . L 5 HOH A 74 674 1009 HOH HOH . L 5 HOH A 75 675 1124 HOH HOH . L 5 HOH A 76 676 1055 HOH HOH . L 5 HOH A 77 677 1127 HOH HOH . L 5 HOH A 78 678 1112 HOH HOH . L 5 HOH A 79 679 1068 HOH HOH . L 5 HOH A 80 680 1024 HOH HOH . L 5 HOH A 81 681 1109 HOH HOH . L 5 HOH A 82 682 1095 HOH HOH . L 5 HOH A 83 683 1031 HOH HOH . L 5 HOH A 84 684 1034 HOH HOH . L 5 HOH A 85 685 1153 HOH HOH . L 5 HOH A 86 686 1122 HOH HOH . L 5 HOH A 87 687 1047 HOH HOH . L 5 HOH A 88 688 1028 HOH HOH . L 5 HOH A 89 689 1096 HOH HOH . L 5 HOH A 90 690 1149 HOH HOH . L 5 HOH A 91 691 1074 HOH HOH . L 5 HOH A 92 692 1067 HOH HOH . L 5 HOH A 93 693 1093 HOH HOH . L 5 HOH A 94 694 1132 HOH HOH . L 5 HOH A 95 695 1118 HOH HOH . L 5 HOH A 96 696 1066 HOH HOH . L 5 HOH A 97 697 1117 HOH HOH . L 5 HOH A 98 698 1125 HOH HOH . L 5 HOH A 99 699 1151 HOH HOH . L 5 HOH A 100 700 1021 HOH HOH . L 5 HOH A 101 701 1146 HOH HOH . L 5 HOH A 102 702 1131 HOH HOH . L 5 HOH A 103 703 1115 HOH HOH . L 5 HOH A 104 704 1101 HOH HOH . L 5 HOH A 105 705 1050 HOH HOH . L 5 HOH A 106 706 1107 HOH HOH . L 5 HOH A 107 707 1071 HOH HOH . L 5 HOH A 108 708 1121 HOH HOH . L 5 HOH A 109 709 1120 HOH HOH . L 5 HOH A 110 710 1090 HOH HOH . L 5 HOH A 111 711 1052 HOH HOH . L 5 HOH A 112 712 1027 HOH HOH . L 5 HOH A 113 713 1140 HOH HOH . L 5 HOH A 114 714 1141 HOH HOH . L 5 HOH A 115 715 1129 HOH HOH . L 5 HOH A 116 716 1142 HOH HOH . L 5 HOH A 117 717 1133 HOH HOH . L 5 HOH A 118 718 1030 HOH HOH . L 5 HOH A 119 719 1004 HOH HOH . L 5 HOH A 120 720 1001 HOH HOH . L 5 HOH A 121 721 1046 HOH HOH . L 5 HOH A 122 722 1145 HOH HOH . L 5 HOH A 123 723 1098 HOH HOH . L 5 HOH A 124 724 1092 HOH HOH . L 5 HOH A 125 725 1099 HOH HOH . L 5 HOH A 126 726 1075 HOH HOH . L 5 HOH A 127 727 1123 HOH HOH . L 5 HOH A 128 728 1022 HOH HOH . L 5 HOH A 129 729 1137 HOH HOH . L 5 HOH A 130 730 1039 HOH HOH . L 5 HOH A 131 731 1134 HOH HOH . L 5 HOH A 132 732 1059 HOH HOH . L 5 HOH A 133 733 1061 HOH HOH . L 5 HOH A 134 734 1014 HOH HOH . L 5 HOH A 135 735 1085 HOH HOH . L 5 HOH A 136 736 1026 HOH HOH . L 5 HOH A 137 737 1048 HOH HOH . L 5 HOH A 138 738 1078 HOH HOH . L 5 HOH A 139 739 1058 HOH HOH . L 5 HOH A 140 740 1128 HOH HOH . L 5 HOH A 141 741 1049 HOH HOH . L 5 HOH A 142 742 1103 HOH HOH . L 5 HOH A 143 743 1113 HOH HOH . L 5 HOH A 144 744 1152 HOH HOH . L 5 HOH A 145 745 1111 HOH HOH . L 5 HOH A 146 746 1130 HOH HOH . L 5 HOH A 147 747 1060 HOH HOH . L 5 HOH A 148 748 1138 HOH HOH . L 5 HOH A 149 749 1038 HOH HOH . L 5 HOH A 150 750 1054 HOH HOH . L 5 HOH A 151 751 1119 HOH HOH . L 5 HOH A 152 752 1154 HOH HOH . L 5 HOH A 153 753 1136 HOH HOH . L 5 HOH A 154 754 1076 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C7X . . . K 4 -21.602 -39.305 -6.857 1 31.62 ? C1 C7X 510 A 1 HETATM 2 C C2 C7X . . . K 4 -21.433 -38.433 -7.938 1 32.48 ? C2 C7X 510 A 1 HETATM 3 C C3 C7X . . . K 4 -20.173 -38.294 -8.539 1 32.52 ? C3 C7X 510 A 1 HETATM 4 C C4 C7X . . . K 4 -18.993 -39.064 -8.029 1 32.24 ? C4 C7X 510 A 1 HETATM 5 C C5 C7X . . . K 4 -19.256 -39.919 -6.953 1 31.66 ? C5 C7X 510 A 1 HETATM 6 C C6 C7X . . . K 4 -17.587 -39.014 -8.642 1 32.95 ? C6 C7X 510 A 1 HETATM 7 C C7 C7X . . . K 4 -17.501 -40.023 -9.841 1 34.53 ? C7 C7X 510 A 1 HETATM 8 N N1 C7X . . . K 4 -14.923 -40.178 -6.426 1 32.46 ? N1 C7X 510 A 1 HETATM 9 N N2 C7X . . . K 4 -20.588 -40.917 -5.314 1 32.44 ? N2 C7X 510 A 1 HETATM 10 O O1 C7X . . . K 4 -20.731 -44.239 0.051 1 34.02 ? O1 C7X 510 A 1 HETATM 11 C C8 C7X . . . K 4 -17.315 -41.496 -9.417 1 33.83 ? C8 C7X 510 A 1 HETATM 12 N N3 C7X . . . K 4 -20.263 -42.017 -2.754 1 32.27 ? N3 C7X 510 A 1 HETATM 13 C C9 C7X . . . K 4 -15.84 -40.258 -7.39 1 33.92 ? C9 C7X 510 A 1 HETATM 14 C C10 C7X . . . K 4 -21.654 -41.463 -4.722 1 31.91 ? C10 C7X 510 A 1 HETATM 15 C C11 C7X . . . K 4 -21.415 -42.217 -3.451 1 32.42 ? C11 C7X 510 A 1 HETATM 16 C C12 C7X . . . K 4 -20.024 -42.679 -1.604 1 32.09 ? C12 C7X 510 A 1 HETATM 17 C C13 C7X . . . K 4 -20.977 -43.574 -1.124 1 32.8 ? C13 C7X 510 A 1 HETATM 18 C C14 C7X . . . K 4 -22.367 -43.123 -2.974 1 31.66 ? C14 C7X 510 A 1 HETATM 19 C C15 C7X . . . K 4 -17.19 -37.621 -9.129 1 31.52 ? C15 C7X 510 A 1 HETATM 20 F F1 C7X . . . K 4 -22.755 -44.096 1.101 1 36.25 ? F1 C7X 510 A 1 HETATM 21 C C17 C7X . . . K 4 -21.745 -44.954 0.762 1 34.45 ? C17 C7X 510 A 1 HETATM 22 N N4 C7X . . . K 4 -22.13 -43.774 -1.827 1 32.55 ? N4 C7X 510 A 1 HETATM 23 O O C7X . . . K 4 -22.798 -41.367 -5.138 1 32.83 ? O C7X 510 A 1 HETATM 24 C C C7X . . . K 4 -20.518 -40.053 -6.37 1 31.83 ? C C7X 510 A 1 HETATM 25 F F C7X . . . K 4 -20.034 -37.46 -9.573 1 33.06 ? F C7X 510 A 1 HETATM 26 N N C7X . . . K 4 -16.592 -39.246 -7.579 1 32.78 ? N C7X 510 A 1 HETATM 27 S S C7X . . . K 4 -15.966 -41.672 -8.292 1 35.72 ? S C7X 510 A 1 HETATM 28 C C16 C7X . . . K 4 -18.637 -39.909 -10.828 1 35.95 ? C16 C7X 510 A 1 HETATM 29 C C22 C7X . . . K 4 -18.528 -39.02 -11.905 1 35.85 ? C22 C7X 510 A 1 HETATM 30 C C21 C7X . . . K 4 -19.556 -38.881 -12.839 1 36.81 ? C21 C7X 510 A 1 HETATM 31 C C20 C7X . . . K 4 -20.725 -39.635 -12.698 1 36.56 ? C20 C7X 510 A 1 HETATM 32 C C19 C7X . . . K 4 -20.865 -40.526 -11.628 1 38.21 ? C19 C7X 510 A 1 HETATM 33 C C18 C7X . . . K 4 -19.823 -40.667 -10.701 1 37.23 ? C18 C7X 510 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 222 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 33 #