data_6JSG # _model_server_result.job_id O1-_oUkWgbIeqIHPulraUw _model_server_result.datetime_utc '2024-11-06 18:34:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jsg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":507}' # _entry.id 6JSG # _exptl.entry_id 6JSG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 378.852 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-[(4S)-2-azanyl-4-methyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-5-chloranyl-pyridine-2-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6JSG _cell.length_a 101.972 _cell.length_b 101.972 _cell.length_c 169.792 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JSG _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 178 A CYS 179 1_555 A SG CYS 382 A CYS 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf2 A SG CYS 240 A CYS 241 1_555 A SG CYS 405 A CYS 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf3 A SG CYS 292 A CYS 293 1_555 A SG CYS 342 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? # _chem_comp.formula 'C17 H16 Cl F N4 O S' _chem_comp.formula_weight 378.852 _chem_comp.id C6U _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-[(4S)-2-azanyl-4-methyl-5,6-dihydro-1,3-thiazin-4-yl]-4-fluoranyl-phenyl]-5-chloranyl-pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F C3 C6U sing 70 n n C10 C9 C6U sing 71 n n C10 C6 C6U sing 72 n n C9 S C6U sing 73 n n C7 C6 C6U sing 74 n n C3 C2 C6U doub 75 n y C3 C4 C6U sing 76 n y C2 C1 C6U sing 77 n y C6 C4 C6U sing 78 n n C6 N C6U sing 79 n n C4 C5 C6U doub 80 n y S C8 C6U sing 81 n n N C8 C6U doub 82 n n C1 C C6U doub 83 n y C8 N1 C6U sing 84 n n C5 C C6U sing 85 n y C N2 C6U sing 86 n n N2 C11 C6U sing 87 n n O C11 C6U doub 88 n n C11 C12 C6U sing 89 n n C12 C16 C6U doub 90 n y C12 N3 C6U sing 91 n y C16 C15 C6U sing 92 n y N3 C13 C6U doub 93 n y C15 C14 C6U doub 94 n y C13 C14 C6U sing 95 n y C14 CL C6U sing 96 n n C1 H1 C6U sing 97 n n C2 H2 C6U sing 98 n n C5 H3 C6U sing 99 n n C7 H4 C6U sing 100 n n C7 H5 C6U sing 101 n n C7 H6 C6U sing 102 n n N1 H7 C6U sing 103 n n N1 H8 C6U sing 104 n n N2 H9 C6U sing 105 n n C9 H10 C6U sing 106 n n C9 H11 C6U sing 107 n n C10 H12 C6U sing 108 n n C10 H13 C6U sing 109 n n C13 H14 C6U sing 110 n n C15 H15 C6U sing 111 n n C16 H16 C6U sing 112 n n # _atom_sites.entry_id 6JSG _atom_sites.fract_transf_matrix[1][1] 0.009807 _atom_sites.fract_transf_matrix[1][2] 0.005662 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00589 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 501 501 IOD IOD . C 2 IOD A 1 502 502 IOD IOD . D 2 IOD A 1 503 503 IOD IOD . E 3 NA A 1 504 504 NA NA . F 4 GOL A 1 505 505 GOL GOL . G 4 GOL A 1 506 506 GOL GOL . H 5 C6U A 1 507 701 C6U MOL . I 6 HOH A 1 601 1058 HOH HOH . I 6 HOH A 2 602 1001 HOH HOH . I 6 HOH A 3 603 1120 HOH HOH . I 6 HOH A 4 604 1019 HOH HOH . I 6 HOH A 5 605 1075 HOH HOH . I 6 HOH A 6 606 1070 HOH HOH . I 6 HOH A 7 607 1011 HOH HOH . I 6 HOH A 8 608 1059 HOH HOH . I 6 HOH A 9 609 1076 HOH HOH . I 6 HOH A 10 610 1143 HOH HOH . I 6 HOH A 11 611 1003 HOH HOH . I 6 HOH A 12 612 1022 HOH HOH . I 6 HOH A 13 613 1009 HOH HOH . I 6 HOH A 14 614 1057 HOH HOH . I 6 HOH A 15 615 1004 HOH HOH . I 6 HOH A 16 616 1149 HOH HOH . I 6 HOH A 17 617 1048 HOH HOH . I 6 HOH A 18 618 1137 HOH HOH . I 6 HOH A 19 619 1067 HOH HOH . I 6 HOH A 20 620 1154 HOH HOH . I 6 HOH A 21 621 1035 HOH HOH . I 6 HOH A 22 622 1183 HOH HOH . I 6 HOH A 23 623 1083 HOH HOH . I 6 HOH A 24 624 1071 HOH HOH . I 6 HOH A 25 625 1043 HOH HOH . I 6 HOH A 26 626 1108 HOH HOH . I 6 HOH A 27 627 1014 HOH HOH . I 6 HOH A 28 628 1027 HOH HOH . I 6 HOH A 29 629 1174 HOH HOH . I 6 HOH A 30 630 1121 HOH HOH . I 6 HOH A 31 631 1097 HOH HOH . I 6 HOH A 32 632 1107 HOH HOH . I 6 HOH A 33 633 1077 HOH HOH . I 6 HOH A 34 634 1034 HOH HOH . I 6 HOH A 35 635 1104 HOH HOH . I 6 HOH A 36 636 1062 HOH HOH . I 6 HOH A 37 637 1156 HOH HOH . I 6 HOH A 38 638 1049 HOH HOH . I 6 HOH A 39 639 1012 HOH HOH . I 6 HOH A 40 640 1146 HOH HOH . I 6 HOH A 41 641 1042 HOH HOH . I 6 HOH A 42 642 1013 HOH HOH . I 6 HOH A 43 643 1079 HOH HOH . I 6 HOH A 44 644 1029 HOH HOH . I 6 HOH A 45 645 1017 HOH HOH . I 6 HOH A 46 646 1082 HOH HOH . I 6 HOH A 47 647 1135 HOH HOH . I 6 HOH A 48 648 1025 HOH HOH . I 6 HOH A 49 649 1026 HOH HOH . I 6 HOH A 50 650 1015 HOH HOH . I 6 HOH A 51 651 1102 HOH HOH . I 6 HOH A 52 652 1164 HOH HOH . I 6 HOH A 53 653 1119 HOH HOH . I 6 HOH A 54 654 1160 HOH HOH . I 6 HOH A 55 655 1044 HOH HOH . I 6 HOH A 56 656 1045 HOH HOH . I 6 HOH A 57 657 1063 HOH HOH . I 6 HOH A 58 658 1005 HOH HOH . I 6 HOH A 59 659 1086 HOH HOH . I 6 HOH A 60 660 1094 HOH HOH . I 6 HOH A 61 661 1098 HOH HOH . I 6 HOH A 62 662 1159 HOH HOH . I 6 HOH A 63 663 1152 HOH HOH . I 6 HOH A 64 664 1036 HOH HOH . I 6 HOH A 65 665 1122 HOH HOH . I 6 HOH A 66 666 1088 HOH HOH . I 6 HOH A 67 667 1091 HOH HOH . I 6 HOH A 68 668 1032 HOH HOH . I 6 HOH A 69 669 1080 HOH HOH . I 6 HOH A 70 670 1020 HOH HOH . I 6 HOH A 71 671 1010 HOH HOH . I 6 HOH A 72 672 1140 HOH HOH . I 6 HOH A 73 673 1030 HOH HOH . I 6 HOH A 74 674 1041 HOH HOH . I 6 HOH A 75 675 1153 HOH HOH . I 6 HOH A 76 676 1021 HOH HOH . I 6 HOH A 77 677 1072 HOH HOH . I 6 HOH A 78 678 1007 HOH HOH . I 6 HOH A 79 679 1038 HOH HOH . I 6 HOH A 80 680 1131 HOH HOH . I 6 HOH A 81 681 1037 HOH HOH . I 6 HOH A 82 682 1060 HOH HOH . I 6 HOH A 83 683 1129 HOH HOH . I 6 HOH A 84 684 1006 HOH HOH . I 6 HOH A 85 685 1167 HOH HOH . I 6 HOH A 86 686 1053 HOH HOH . I 6 HOH A 87 687 1100 HOH HOH . I 6 HOH A 88 688 1163 HOH HOH . I 6 HOH A 89 689 1123 HOH HOH . I 6 HOH A 90 690 1093 HOH HOH . I 6 HOH A 91 691 1028 HOH HOH . I 6 HOH A 92 692 1087 HOH HOH . I 6 HOH A 93 693 1031 HOH HOH . I 6 HOH A 94 694 1008 HOH HOH . I 6 HOH A 95 695 1065 HOH HOH . I 6 HOH A 96 696 1040 HOH HOH . I 6 HOH A 97 697 1125 HOH HOH . I 6 HOH A 98 698 1138 HOH HOH . I 6 HOH A 99 699 1018 HOH HOH . I 6 HOH A 100 700 1136 HOH HOH . I 6 HOH A 101 701 1184 HOH HOH . I 6 HOH A 102 702 1180 HOH HOH . I 6 HOH A 103 703 1024 HOH HOH . I 6 HOH A 104 704 1073 HOH HOH . I 6 HOH A 105 705 1115 HOH HOH . I 6 HOH A 106 706 1150 HOH HOH . I 6 HOH A 107 707 1085 HOH HOH . I 6 HOH A 108 708 1002 HOH HOH . I 6 HOH A 109 709 1139 HOH HOH . I 6 HOH A 110 710 1166 HOH HOH . I 6 HOH A 111 711 1170 HOH HOH . I 6 HOH A 112 712 1078 HOH HOH . I 6 HOH A 113 713 1039 HOH HOH . I 6 HOH A 114 714 1081 HOH HOH . I 6 HOH A 115 715 1033 HOH HOH . I 6 HOH A 116 716 1144 HOH HOH . I 6 HOH A 117 717 1179 HOH HOH . I 6 HOH A 118 718 1132 HOH HOH . I 6 HOH A 119 719 1111 HOH HOH . I 6 HOH A 120 720 1157 HOH HOH . I 6 HOH A 121 721 1101 HOH HOH . I 6 HOH A 122 722 1092 HOH HOH . I 6 HOH A 123 723 1061 HOH HOH . I 6 HOH A 124 724 1158 HOH HOH . I 6 HOH A 125 725 1066 HOH HOH . I 6 HOH A 126 726 1169 HOH HOH . I 6 HOH A 127 727 1112 HOH HOH . I 6 HOH A 128 728 1054 HOH HOH . I 6 HOH A 129 729 1090 HOH HOH . I 6 HOH A 130 730 1099 HOH HOH . I 6 HOH A 131 731 1114 HOH HOH . I 6 HOH A 132 732 1106 HOH HOH . I 6 HOH A 133 733 1095 HOH HOH . I 6 HOH A 134 734 1133 HOH HOH . I 6 HOH A 135 735 1134 HOH HOH . I 6 HOH A 136 736 1084 HOH HOH . I 6 HOH A 137 737 1172 HOH HOH . I 6 HOH A 138 738 1089 HOH HOH . I 6 HOH A 139 739 1148 HOH HOH . I 6 HOH A 140 740 1046 HOH HOH . I 6 HOH A 141 741 1127 HOH HOH . I 6 HOH A 142 742 1016 HOH HOH . I 6 HOH A 143 743 1023 HOH HOH . I 6 HOH A 144 744 1124 HOH HOH . I 6 HOH A 145 745 1105 HOH HOH . I 6 HOH A 146 746 1145 HOH HOH . I 6 HOH A 147 747 1069 HOH HOH . I 6 HOH A 148 748 1052 HOH HOH . I 6 HOH A 149 749 1151 HOH HOH . I 6 HOH A 150 750 1051 HOH HOH . I 6 HOH A 151 751 1181 HOH HOH . I 6 HOH A 152 752 1162 HOH HOH . I 6 HOH A 153 753 1176 HOH HOH . I 6 HOH A 154 754 1116 HOH HOH . I 6 HOH A 155 755 1047 HOH HOH . I 6 HOH A 156 756 1110 HOH HOH . I 6 HOH A 157 757 1175 HOH HOH . I 6 HOH A 158 758 1165 HOH HOH . I 6 HOH A 159 759 1128 HOH HOH . I 6 HOH A 160 760 1055 HOH HOH . I 6 HOH A 161 761 1064 HOH HOH . I 6 HOH A 162 762 1171 HOH HOH . I 6 HOH A 163 763 1056 HOH HOH . I 6 HOH A 164 764 1068 HOH HOH . I 6 HOH A 165 765 1173 HOH HOH . I 6 HOH A 166 766 1178 HOH HOH . I 6 HOH A 167 767 1130 HOH HOH . I 6 HOH A 168 768 1074 HOH HOH . I 6 HOH A 169 769 1096 HOH HOH . I 6 HOH A 170 770 1050 HOH HOH . I 6 HOH A 171 771 1109 HOH HOH . I 6 HOH A 172 772 1142 HOH HOH . I 6 HOH A 173 773 1155 HOH HOH . I 6 HOH A 174 774 1118 HOH HOH . I 6 HOH A 175 775 1177 HOH HOH . I 6 HOH A 176 776 1141 HOH HOH . I 6 HOH A 177 777 1161 HOH HOH . I 6 HOH A 178 778 1126 HOH HOH . I 6 HOH A 179 779 1147 HOH HOH . I 6 HOH A 180 780 1168 HOH HOH . I 6 HOH A 181 781 1103 HOH HOH . I 6 HOH A 182 782 1113 HOH HOH . I 6 HOH A 183 783 1182 HOH HOH . I 6 HOH A 184 784 1117 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 C6U . . . H 5 21.613 39.236 -7.445 1 39.33 ? C1 C6U 507 A 1 HETATM 2 C C2 C6U . . . H 5 21.359 38.583 -8.651 1 38.96 ? C2 C6U 507 A 1 HETATM 3 C C3 C6U . . . H 5 20.04 38.368 -9.06 1 38.85 ? C3 C6U 507 A 1 HETATM 4 C C4 C6U . . . H 5 18.896 38.824 -8.202 1 38.46 ? C4 C6U 507 A 1 HETATM 5 C C5 C6U . . . H 5 19.231 39.473 -7.009 1 38.47 ? C5 C6U 507 A 1 HETATM 6 C C6 C6U . . . H 5 17.434 38.622 -8.601 1 38.78 ? C6 C6U 507 A 1 HETATM 7 C C7 C6U . . . H 5 17.175 37.193 -9.061 1 35.17 ? C7 C6U 507 A 1 HETATM 8 N N1 C6U . . . H 5 15.057 39.815 -6.097 1 38.5 ? N1 C6U 507 A 1 HETATM 9 N N2 C6U . . . H 5 20.739 40.315 -5.438 1 42.75 ? N2 C6U 507 A 1 HETATM 10 C C8 C6U . . . H 5 15.876 39.861 -7.148 1 40.21 ? C8 C6U 507 A 1 HETATM 11 N N3 C6U . . . H 5 20.593 41.312 -2.859 1 42.5 ? N3 C6U 507 A 1 HETATM 12 C C9 C6U . . . H 5 17.122 41.052 -9.385 1 38.46 ? C9 C6U 507 A 1 HETATM 13 C C10 C6U . . . H 5 17.121 39.569 -9.78 1 37.77 ? C10 C6U 507 A 1 HETATM 14 C C11 C6U . . . H 5 21.842 40.885 -4.921 1 42.35 ? C11 C6U 507 A 1 HETATM 15 C C12 C6U . . . H 5 21.656 41.644 -3.643 1 41.81 ? C12 C6U 507 A 1 HETATM 16 C C13 C6U . . . H 5 20.333 41.933 -1.697 1 42.01 ? C13 C6U 507 A 1 HETATM 17 C C14 C6U . . . H 5 21.176 42.948 -1.264 1 43.59 ? C14 C6U 507 A 1 HETATM 18 C C15 C6U . . . H 5 22.295 43.31 -2.037 1 43.57 ? C15 C6U 507 A 1 HETATM 19 F F C6U . . . H 5 19.816 37.746 -10.225 1 40.38 ? F C6U 507 A 1 HETATM 20 S S C6U . . . H 5 16.011 41.285 -8.022 1 41.42 ? S C6U 507 A 1 HETATM 21 N N C6U . . . H 5 16.536 38.814 -7.45 1 37.84 ? N C6U 507 A 1 HETATM 22 C C C6U . . . H 5 20.558 39.685 -6.63 1 40.63 ? C C6U 507 A 1 HETATM 23 O O C6U . . . H 5 22.961 40.805 -5.401 1 43.27 ? O C6U 507 A 1 HETATM 24 C C16 C6U . . . H 5 22.542 42.654 -3.248 1 41.33 ? C16 C6U 507 A 1 HETATM 25 CL CL C6U . . . H 5 20.808 43.73 0.305 1 46.54 ? CL C6U 507 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #