data_6JSN # _model_server_result.job_id vZSdw7jn-M9hI1XCRbK0Tw _model_server_result.datetime_utc '2024-11-06 20:39:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jsn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":505}' # _entry.id 6JSN # _exptl.entry_id 6JSN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 126.904 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'IODIDE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6JSN _cell.length_a 101.705 _cell.length_b 101.705 _cell.length_c 170.422 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JSN _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 178 A CYS 179 1_555 A SG CYS 382 A CYS 383 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf2 A SG CYS 240 A CYS 241 1_555 A SG CYS 405 A CYS 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.981 ? disulf ? disulf3 A SG CYS 292 A CYS 293 1_555 A SG CYS 342 A CYS 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? # _chem_comp.formula 'I -1' _chem_comp.formula_weight 126.904 _chem_comp.id IOD _chem_comp.mon_nstd_flag . _chem_comp.name 'IODIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6JSN _atom_sites.fract_transf_matrix[1][1] 0.009832 _atom_sites.fract_transf_matrix[1][2] 0.005677 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011353 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005868 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD A 1 501 501 IOD IOD . C 2 IOD A 1 502 502 IOD IOD . D 2 IOD A 1 503 503 IOD IOD . E 2 IOD A 1 504 504 IOD IOD . F 2 IOD A 1 505 505 IOD IOD . G 2 IOD A 1 506 506 IOD IOD . H 3 GOL A 1 507 507 GOL GOL . I 4 C7O A 1 508 701 C7O MOL . J 5 HOH A 1 601 1011 HOH HOH . J 5 HOH A 2 602 1006 HOH HOH . J 5 HOH A 3 603 1010 HOH HOH . J 5 HOH A 4 604 1019 HOH HOH . J 5 HOH A 5 605 1026 HOH HOH . J 5 HOH A 6 606 1009 HOH HOH . J 5 HOH A 7 607 1021 HOH HOH . J 5 HOH A 8 608 1041 HOH HOH . J 5 HOH A 9 609 1020 HOH HOH . J 5 HOH A 10 610 1043 HOH HOH . J 5 HOH A 11 611 1004 HOH HOH . J 5 HOH A 12 612 1034 HOH HOH . J 5 HOH A 13 613 1051 HOH HOH . J 5 HOH A 14 614 1003 HOH HOH . J 5 HOH A 15 615 1046 HOH HOH . J 5 HOH A 16 616 1014 HOH HOH . J 5 HOH A 17 617 1032 HOH HOH . J 5 HOH A 18 618 1018 HOH HOH . J 5 HOH A 19 619 1035 HOH HOH . J 5 HOH A 20 620 1053 HOH HOH . J 5 HOH A 21 621 1001 HOH HOH . J 5 HOH A 22 622 1037 HOH HOH . J 5 HOH A 23 623 1036 HOH HOH . J 5 HOH A 24 624 1030 HOH HOH . J 5 HOH A 25 625 1047 HOH HOH . J 5 HOH A 26 626 1055 HOH HOH . J 5 HOH A 27 627 1024 HOH HOH . J 5 HOH A 28 628 1016 HOH HOH . J 5 HOH A 29 629 1027 HOH HOH . J 5 HOH A 30 630 1005 HOH HOH . J 5 HOH A 31 631 1038 HOH HOH . J 5 HOH A 32 632 1023 HOH HOH . J 5 HOH A 33 633 1045 HOH HOH . J 5 HOH A 34 634 1007 HOH HOH . J 5 HOH A 35 635 1017 HOH HOH . J 5 HOH A 36 636 1033 HOH HOH . J 5 HOH A 37 637 1025 HOH HOH . J 5 HOH A 38 638 1073 HOH HOH . J 5 HOH A 39 639 1008 HOH HOH . J 5 HOH A 40 640 1044 HOH HOH . J 5 HOH A 41 641 1022 HOH HOH . J 5 HOH A 42 642 1062 HOH HOH . J 5 HOH A 43 643 1002 HOH HOH . J 5 HOH A 44 644 1042 HOH HOH . J 5 HOH A 45 645 1039 HOH HOH . J 5 HOH A 46 646 1013 HOH HOH . J 5 HOH A 47 647 1012 HOH HOH . J 5 HOH A 48 648 1071 HOH HOH . J 5 HOH A 49 649 1052 HOH HOH . J 5 HOH A 50 650 1031 HOH HOH . J 5 HOH A 51 651 1056 HOH HOH . J 5 HOH A 52 652 1061 HOH HOH . J 5 HOH A 53 653 1065 HOH HOH . J 5 HOH A 54 654 1029 HOH HOH . J 5 HOH A 55 655 1077 HOH HOH . J 5 HOH A 56 656 1068 HOH HOH . J 5 HOH A 57 657 1015 HOH HOH . J 5 HOH A 58 658 1060 HOH HOH . J 5 HOH A 59 659 1066 HOH HOH . J 5 HOH A 60 660 1074 HOH HOH . J 5 HOH A 61 661 1070 HOH HOH . J 5 HOH A 62 662 1040 HOH HOH . J 5 HOH A 63 663 1049 HOH HOH . J 5 HOH A 64 664 1054 HOH HOH . J 5 HOH A 65 665 1028 HOH HOH . J 5 HOH A 66 666 1063 HOH HOH . J 5 HOH A 67 667 1064 HOH HOH . J 5 HOH A 68 668 1050 HOH HOH . J 5 HOH A 69 669 1057 HOH HOH . J 5 HOH A 70 670 1067 HOH HOH . J 5 HOH A 71 671 1058 HOH HOH . J 5 HOH A 72 672 1072 HOH HOH . J 5 HOH A 73 673 1059 HOH HOH . J 5 HOH A 74 674 1048 HOH HOH . J 5 HOH A 75 675 1069 HOH HOH . J 5 HOH A 76 676 1076 HOH HOH . J 5 HOH A 77 677 1075 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol I _atom_site.label_atom_id I _atom_site.label_comp_id IOD _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 2 _atom_site.Cartn_x -10.796 _atom_site.Cartn_y -17.391 _atom_site.Cartn_z -6.332 _atom_site.occupancy 0.56 _atom_site.B_iso_or_equiv 76.59 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id I _atom_site.auth_comp_id IOD _atom_site.auth_seq_id 505 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 1 #