data_6JUH
#
_model_server_result.job_id            IDzSdwTHTMH1ItW_CyHOUQ 
_model_server_result.datetime_utc      '2024-11-22 10:55:56' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6juh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"N","auth_seq_id":1304}' 
#
_entry.id    6JUH 
#
_exptl.entry_id    6JUH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              678.94 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JUH 
_cell.length_a            124.86 
_cell.length_b            125.52 
_cell.length_c            191.42 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JUH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 2 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 F N N 
? 3 J N N 
? 3 M N N 
? 3 N N N 
#
_chem_comp.formula           'C36 H73 N O8 P 1' 
_chem_comp.formula_weight    678.94 
_chem_comp.id                PX4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 P1 PX4 sing 484 n n 
O1 H1P PX4 sing 485 n n 
O2 P1 PX4 doub 486 n n 
P1 O3 PX4 sing 487 n n 
P1 O4 PX4 sing 488 n n 
O3 C1 PX4 sing 489 n n 
C1 C2 PX4 sing 490 n n 
C1 H1 PX4 sing 491 n n 
C1 H2 PX4 sing 492 n n 
C2 N1 PX4 sing 493 n n 
C2 H3 PX4 sing 494 n n 
C2 H4 PX4 sing 495 n n 
N1 C3 PX4 sing 496 n n 
N1 C4 PX4 sing 497 n n 
N1 C5 PX4 sing 498 n n 
C3 H5 PX4 sing 499 n n 
C3 H6 PX4 sing 500 n n 
C3 H7 PX4 sing 501 n n 
C4 H8 PX4 sing 502 n n 
C4 H9 PX4 sing 503 n n 
C4 H10 PX4 sing 504 n n 
C5 H11 PX4 sing 505 n n 
C5 H12 PX4 sing 506 n n 
C5 H13 PX4 sing 507 n n 
O4 C6 PX4 sing 508 n n 
C6 C7 PX4 sing 509 n n 
C6 H14 PX4 sing 510 n n 
C6 H15 PX4 sing 511 n n 
C7 C8 PX4 sing 512 n n 
C7 O7 PX4 sing 513 n n 
C7 H16 PX4 sing 514 n n 
C8 O5 PX4 sing 515 n n 
C8 H17 PX4 sing 516 n n 
C8 H18 PX4 sing 517 n n 
O5 C9 PX4 sing 518 n n 
C9 O6 PX4 doub 519 n n 
C9 C10 PX4 sing 520 n n 
C10 C11 PX4 sing 521 n n 
C10 H19 PX4 sing 522 n n 
C10 H20 PX4 sing 523 n n 
C11 C12 PX4 sing 524 n n 
C11 H21 PX4 sing 525 n n 
C11 H22 PX4 sing 526 n n 
C12 C13 PX4 sing 527 n n 
C12 H23 PX4 sing 528 n n 
C12 H24 PX4 sing 529 n n 
C13 C14 PX4 sing 530 n n 
C13 H25 PX4 sing 531 n n 
C13 H26 PX4 sing 532 n n 
C14 C15 PX4 sing 533 n n 
C14 H27 PX4 sing 534 n n 
C14 H28 PX4 sing 535 n n 
C15 C16 PX4 sing 536 n n 
C15 H29 PX4 sing 537 n n 
C15 H30 PX4 sing 538 n n 
C16 C17 PX4 sing 539 n n 
C16 H31 PX4 sing 540 n n 
C16 H32 PX4 sing 541 n n 
C17 C18 PX4 sing 542 n n 
C17 H33 PX4 sing 543 n n 
C17 H34 PX4 sing 544 n n 
C18 C19 PX4 sing 545 n n 
C18 H35 PX4 sing 546 n n 
C18 H36 PX4 sing 547 n n 
C19 C20 PX4 sing 548 n n 
C19 H37 PX4 sing 549 n n 
C19 H38 PX4 sing 550 n n 
C20 C21 PX4 sing 551 n n 
C20 H39 PX4 sing 552 n n 
C20 H40 PX4 sing 553 n n 
C21 C22 PX4 sing 554 n n 
C21 H41 PX4 sing 555 n n 
C21 H42 PX4 sing 556 n n 
C22 H43 PX4 sing 557 n n 
C22 H44 PX4 sing 558 n n 
C22 H45 PX4 sing 559 n n 
O7 C23 PX4 sing 560 n n 
C23 O8 PX4 doub 561 n n 
C23 C24 PX4 sing 562 n n 
C24 C25 PX4 sing 563 n n 
C24 H46 PX4 sing 564 n n 
C24 H47 PX4 sing 565 n n 
C25 C26 PX4 sing 566 n n 
C25 H48 PX4 sing 567 n n 
C25 H49 PX4 sing 568 n n 
C26 C27 PX4 sing 569 n n 
C26 H50 PX4 sing 570 n n 
C26 H51 PX4 sing 571 n n 
C27 C28 PX4 sing 572 n n 
C27 H52 PX4 sing 573 n n 
C27 H53 PX4 sing 574 n n 
C28 C29 PX4 sing 575 n n 
C28 H54 PX4 sing 576 n n 
C28 H55 PX4 sing 577 n n 
C29 C30 PX4 sing 578 n n 
C29 H56 PX4 sing 579 n n 
C29 H57 PX4 sing 580 n n 
C30 C31 PX4 sing 581 n n 
C30 H58 PX4 sing 582 n n 
C30 H59 PX4 sing 583 n n 
C31 C32 PX4 sing 584 n n 
C31 H60 PX4 sing 585 n n 
C31 H61 PX4 sing 586 n n 
C32 C33 PX4 sing 587 n n 
C32 H62 PX4 sing 588 n n 
C32 H63 PX4 sing 589 n n 
C33 C34 PX4 sing 590 n n 
C33 H64 PX4 sing 591 n n 
C33 H65 PX4 sing 592 n n 
C34 C35 PX4 sing 593 n n 
C34 H66 PX4 sing 594 n n 
C34 H67 PX4 sing 595 n n 
C35 C36 PX4 sing 596 n n 
C35 H68 PX4 sing 597 n n 
C35 H69 PX4 sing 598 n n 
C36 H70 PX4 sing 599 n n 
C36 H71 PX4 sing 600 n n 
C36 H72 PX4 sing 601 n n 
#
_atom_sites.entry_id                     6JUH 
_atom_sites.fract_transf_matrix[1][1]    0.008009 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007967 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005224 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 MC3 A 1 1301 1309 MC3 PX5 . 
F 3 PX4 A 1 1302 1303 PX4 PX6 . 
G 4 G3P A 1 1303 1305 G3P PX7 . 
H 5 CA B 1 1301 2 CA CA . 
I 2 MC3 B 1 1302 1310 MC3 PX5 . 
J 3 PX4 B 1 1303 1304 PX4 PX6 . 
K 5 CA C 1 1301 1 CA CA . 
L 2 MC3 C 1 1302 1308 MC3 PX5 . 
M 3 PX4 C 1 1303 1302 PX4 PX6 . 
N 3 PX4 C 1 1304 1305 PX4 PX6 . 
O 4 G3P C 1 1305 1306 G3P PX7 . 
P 4 G3P C 1 1306 1308 G3P PX7 . 
Q 6 C9X D 1 1301 8 C9X EFO . 
R 2 MC3 D 1 1302 1311 MC3 PX5 . 
S 4 G3P D 1 1303 1307 G3P PX7 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PX4 . . . N 3 26.823 37.127 9.125 1 116.91 ? O1 PX4 1304 C 1 
HETATM 2 O O2 PX4 . . . N 3 25.352 38.155 7.508 1 124.25 ? O2 PX4 1304 C 1 
HETATM 3 P P1 PX4 . . . N 3 25.417 37.62 8.922 1 118.44 ? P1 PX4 1304 C 1 
HETATM 4 O O3 PX4 . . . N 3 24.529 36.4 9.086 1 115.79 ? O3 PX4 1304 C 1 
HETATM 5 O O4 PX4 . . . N 3 25.039 38.83 10.028 1 101.43 ? O4 PX4 1304 C 1 
HETATM 6 C C6 PX4 . . . N 3 23.749 38.97 10.576 1 81.26 ? C6 PX4 1304 C 1 
HETATM 7 C C7 PX4 . . . N 3 23.705 38.601 12.067 1 69.09 ? C7 PX4 1304 C 1 
HETATM 8 C C8 PX4 . . . N 3 22.262 38.26 12.481 1 66.29 ? C8 PX4 1304 C 1 
HETATM 9 O O5 PX4 . . . N 3 21.989 36.909 12.237 1 76.03 ? O5 PX4 1304 C 1 
HETATM 10 O O7 PX4 . . . N 3 24.546 37.516 12.392 1 58.81 ? O7 PX4 1304 C 1 
#
_model_server_stats.io_time_ms              86 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          13 
_model_server_stats.element_count           10 
#