data_6JVP
#
_model_server_result.job_id            63SUwO5te59BEhMfUzFrUA 
_model_server_result.datetime_utc      '2025-01-10 13:05:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6jvp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":200}' 
#
_entry.id    6JVP 
#
_exptl.entry_id    6JVP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              233.313 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N4-cyclopropyl-6-piperidin-1-yl-pyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6JVP 
_cell.length_a            59.086 
_cell.length_b            68.891 
_cell.length_c            78.279 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6JVP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C12 H19 N5' 
_chem_comp.formula_weight    233.313 
_chem_comp.id                CJ9 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N4-cyclopropyl-6-piperidin-1-yl-pyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C10 C09 CJ9 sing 70 n n 
C10 C08 CJ9 sing 71 n n 
C09 C08 CJ9 sing 72 n n 
C08 N07 CJ9 sing 73 n n 
N07 C06 CJ9 sing 74 n n 
C14 C13 CJ9 sing 75 n n 
C14 C15 CJ9 sing 76 n n 
C06 C05 CJ9 doub 77 n y 
C06 N11 CJ9 sing 78 n y 
C05 C04 CJ9 sing 79 n y 
C13 N12 CJ9 sing 80 n n 
N11 C02 CJ9 doub 81 n y 
C15 C16 CJ9 sing 82 n n 
C04 N12 CJ9 sing 83 n n 
C04 N03 CJ9 doub 84 n y 
N12 C17 CJ9 sing 85 n n 
C02 N03 CJ9 sing 86 n y 
C02 N01 CJ9 sing 87 n n 
C16 C17 CJ9 sing 88 n n 
N01 H1 CJ9 sing 89 n n 
N01 H2 CJ9 sing 90 n n 
C05 H3 CJ9 sing 91 n n 
N07 H4 CJ9 sing 92 n n 
C08 H5 CJ9 sing 93 n n 
C09 H6 CJ9 sing 94 n n 
C09 H7 CJ9 sing 95 n n 
C10 H8 CJ9 sing 96 n n 
C10 H9 CJ9 sing 97 n n 
C13 H10 CJ9 sing 98 n n 
C13 H11 CJ9 sing 99 n n 
C14 H12 CJ9 sing 100 n n 
C14 H13 CJ9 sing 101 n n 
C15 H14 CJ9 sing 102 n n 
C15 H15 CJ9 sing 103 n n 
C16 H16 CJ9 sing 104 n n 
C16 H17 CJ9 sing 105 n n 
C17 H18 CJ9 sing 106 n n 
C17 H19 CJ9 sing 107 n n 
#
_atom_sites.entry_id                     6JVP 
_atom_sites.fract_transf_matrix[1][1]    0.016924 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014516 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012775 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 CJ9 A 1 200 200 CJ9 MPB . 
D 2 CJ9 B 1 200 200 CJ9 MPB . 
E 3 HOH A 1 301 23 HOH HOH . 
E 3 HOH A 2 302 57 HOH HOH . 
E 3 HOH A 3 303 111 HOH HOH . 
E 3 HOH A 4 304 10 HOH HOH . 
E 3 HOH A 5 305 29 HOH HOH . 
E 3 HOH A 6 306 36 HOH HOH . 
E 3 HOH A 7 307 42 HOH HOH . 
E 3 HOH A 8 308 149 HOH HOH . 
E 3 HOH A 9 309 147 HOH HOH . 
E 3 HOH A 10 310 19 HOH HOH . 
E 3 HOH A 11 311 80 HOH HOH . 
E 3 HOH A 12 312 7 HOH HOH . 
E 3 HOH A 13 313 33 HOH HOH . 
E 3 HOH A 14 314 26 HOH HOH . 
E 3 HOH A 15 315 136 HOH HOH . 
E 3 HOH A 16 316 1 HOH HOH . 
E 3 HOH A 17 317 46 HOH HOH . 
E 3 HOH A 18 318 92 HOH HOH . 
E 3 HOH A 19 319 2 HOH HOH . 
E 3 HOH A 20 320 30 HOH HOH . 
E 3 HOH A 21 321 34 HOH HOH . 
E 3 HOH A 22 322 86 HOH HOH . 
E 3 HOH A 23 323 72 HOH HOH . 
E 3 HOH A 24 324 140 HOH HOH . 
E 3 HOH A 25 325 150 HOH HOH . 
E 3 HOH A 26 326 82 HOH HOH . 
E 3 HOH A 27 327 37 HOH HOH . 
E 3 HOH A 28 328 3 HOH HOH . 
E 3 HOH A 29 329 97 HOH HOH . 
E 3 HOH A 30 330 148 HOH HOH . 
E 3 HOH A 31 331 40 HOH HOH . 
E 3 HOH A 32 332 79 HOH HOH . 
E 3 HOH A 33 333 73 HOH HOH . 
E 3 HOH A 34 334 17 HOH HOH . 
E 3 HOH A 35 335 68 HOH HOH . 
E 3 HOH A 36 336 84 HOH HOH . 
E 3 HOH A 37 337 9 HOH HOH . 
E 3 HOH A 38 338 60 HOH HOH . 
E 3 HOH A 39 339 67 HOH HOH . 
E 3 HOH A 40 340 63 HOH HOH . 
E 3 HOH A 41 341 89 HOH HOH . 
E 3 HOH A 42 342 90 HOH HOH . 
E 3 HOH A 43 343 101 HOH HOH . 
E 3 HOH A 44 344 32 HOH HOH . 
E 3 HOH A 45 345 62 HOH HOH . 
E 3 HOH A 46 346 52 HOH HOH . 
E 3 HOH A 47 347 102 HOH HOH . 
E 3 HOH A 48 348 94 HOH HOH . 
E 3 HOH A 49 349 11 HOH HOH . 
E 3 HOH A 50 350 146 HOH HOH . 
E 3 HOH A 51 351 31 HOH HOH . 
E 3 HOH A 52 352 54 HOH HOH . 
E 3 HOH A 53 353 64 HOH HOH . 
E 3 HOH A 54 354 55 HOH HOH . 
E 3 HOH A 55 355 95 HOH HOH . 
E 3 HOH A 56 356 65 HOH HOH . 
E 3 HOH A 57 357 77 HOH HOH . 
E 3 HOH A 58 358 133 HOH HOH . 
E 3 HOH A 59 359 117 HOH HOH . 
E 3 HOH A 60 360 110 HOH HOH . 
E 3 HOH A 61 361 8 HOH HOH . 
E 3 HOH A 62 362 137 HOH HOH . 
E 3 HOH A 63 363 41 HOH HOH . 
E 3 HOH A 64 364 14 HOH HOH . 
E 3 HOH A 65 365 48 HOH HOH . 
E 3 HOH A 66 366 83 HOH HOH . 
E 3 HOH A 67 367 112 HOH HOH . 
E 3 HOH A 68 368 15 HOH HOH . 
E 3 HOH A 69 369 91 HOH HOH . 
E 3 HOH A 70 370 78 HOH HOH . 
E 3 HOH A 71 371 75 HOH HOH . 
E 3 HOH A 72 372 96 HOH HOH . 
E 3 HOH A 73 373 107 HOH HOH . 
E 3 HOH A 74 374 104 HOH HOH . 
E 3 HOH A 75 375 118 HOH HOH . 
E 3 HOH A 76 376 76 HOH HOH . 
E 3 HOH A 77 377 87 HOH HOH . 
E 3 HOH A 78 378 128 HOH HOH . 
E 3 HOH A 79 379 143 HOH HOH . 
E 3 HOH A 80 380 71 HOH HOH . 
E 3 HOH A 81 381 130 HOH HOH . 
E 3 HOH A 82 382 81 HOH HOH . 
E 3 HOH A 83 383 120 HOH HOH . 
E 3 HOH A 84 384 125 HOH HOH . 
E 3 HOH A 85 385 18 HOH HOH . 
E 3 HOH A 86 386 109 HOH HOH . 
E 3 HOH A 87 387 70 HOH HOH . 
E 3 HOH A 88 388 114 HOH HOH . 
F 3 HOH B 1 301 27 HOH HOH . 
F 3 HOH B 2 302 142 HOH HOH . 
F 3 HOH B 3 303 105 HOH HOH . 
F 3 HOH B 4 304 124 HOH HOH . 
F 3 HOH B 5 305 88 HOH HOH . 
F 3 HOH B 6 306 132 HOH HOH . 
F 3 HOH B 7 307 28 HOH HOH . 
F 3 HOH B 8 308 61 HOH HOH . 
F 3 HOH B 9 309 122 HOH HOH . 
F 3 HOH B 10 310 66 HOH HOH . 
F 3 HOH B 11 311 53 HOH HOH . 
F 3 HOH B 12 312 21 HOH HOH . 
F 3 HOH B 13 313 38 HOH HOH . 
F 3 HOH B 14 314 141 HOH HOH . 
F 3 HOH B 15 315 93 HOH HOH . 
F 3 HOH B 16 316 22 HOH HOH . 
F 3 HOH B 17 317 127 HOH HOH . 
F 3 HOH B 18 318 138 HOH HOH . 
F 3 HOH B 19 319 4 HOH HOH . 
F 3 HOH B 20 320 69 HOH HOH . 
F 3 HOH B 21 321 49 HOH HOH . 
F 3 HOH B 22 322 100 HOH HOH . 
F 3 HOH B 23 323 47 HOH HOH . 
F 3 HOH B 24 324 16 HOH HOH . 
F 3 HOH B 25 325 119 HOH HOH . 
F 3 HOH B 26 326 121 HOH HOH . 
F 3 HOH B 27 327 39 HOH HOH . 
F 3 HOH B 28 328 45 HOH HOH . 
F 3 HOH B 29 329 12 HOH HOH . 
F 3 HOH B 30 330 58 HOH HOH . 
F 3 HOH B 31 331 13 HOH HOH . 
F 3 HOH B 32 332 74 HOH HOH . 
F 3 HOH B 33 333 116 HOH HOH . 
F 3 HOH B 34 334 56 HOH HOH . 
F 3 HOH B 35 335 44 HOH HOH . 
F 3 HOH B 36 336 145 HOH HOH . 
F 3 HOH B 37 337 123 HOH HOH . 
F 3 HOH B 38 338 126 HOH HOH . 
F 3 HOH B 39 339 24 HOH HOH . 
F 3 HOH B 40 340 144 HOH HOH . 
F 3 HOH B 41 341 50 HOH HOH . 
F 3 HOH B 42 342 43 HOH HOH . 
F 3 HOH B 43 343 139 HOH HOH . 
F 3 HOH B 44 344 98 HOH HOH . 
F 3 HOH B 45 345 135 HOH HOH . 
F 3 HOH B 46 346 103 HOH HOH . 
F 3 HOH B 47 347 151 HOH HOH . 
F 3 HOH B 48 348 25 HOH HOH . 
F 3 HOH B 49 349 51 HOH HOH . 
F 3 HOH B 50 350 59 HOH HOH . 
F 3 HOH B 51 351 99 HOH HOH . 
F 3 HOH B 52 352 85 HOH HOH . 
F 3 HOH B 53 353 115 HOH HOH . 
F 3 HOH B 54 354 134 HOH HOH . 
F 3 HOH B 55 355 35 HOH HOH . 
F 3 HOH B 56 356 20 HOH HOH . 
F 3 HOH B 57 357 131 HOH HOH . 
F 3 HOH B 58 358 106 HOH HOH . 
F 3 HOH B 59 359 129 HOH HOH . 
F 3 HOH B 60 360 6 HOH HOH . 
F 3 HOH B 61 361 108 HOH HOH . 
F 3 HOH B 62 362 113 HOH HOH . 
F 3 HOH B 63 363 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N01 CJ9 . . . D 2 3.757 -12.477 -11.645 1 22.55 ? N01 CJ9 200 B 1 
HETATM 2 C C02 CJ9 . . . D 2 2.947 -11.916 -12.722 1 22.16 ? C02 CJ9 200 B 1 
HETATM 3 N N03 CJ9 . . . D 2 1.631 -11.75 -12.518 1 23.74 ? N03 CJ9 200 B 1 
HETATM 4 C C04 CJ9 . . . D 2 0.856 -11.241 -13.472 1 17.49 ? C04 CJ9 200 B 1 
HETATM 5 C C05 CJ9 . . . D 2 1.439 -10.869 -14.692 1 14.38 ? C05 CJ9 200 B 1 
HETATM 6 C C06 CJ9 . . . D 2 2.827 -11.078 -14.851 1 15.74 ? C06 CJ9 200 B 1 
HETATM 7 N N07 CJ9 . . . D 2 3.485 -10.736 -16.107 1 19.85 ? N07 CJ9 200 B 1 
HETATM 8 C C08 CJ9 . . . D 2 2.685 -10.222 -17.223 1 21.16 ? C08 CJ9 200 B 1 
HETATM 9 C C09 CJ9 . . . D 2 3.23 -10.531 -18.608 1 16.78 ? C09 CJ9 200 B 1 
HETATM 10 C C10 CJ9 . . . D 2 2.002 -11.299 -18.084 1 17.72 ? C10 CJ9 200 B 1 
HETATM 11 N N11 CJ9 . . . D 2 3.547 -11.587 -13.863 1 15.63 ? N11 CJ9 200 B 1 
HETATM 12 N N12 CJ9 . . . D 2 -0.57 -11.056 -13.214 1 25.43 ? N12 CJ9 200 B 1 
HETATM 13 C C13 CJ9 . . . D 2 -1.17 -11.354 -11.831 1 22.12 ? C13 CJ9 200 B 1 
HETATM 14 C C14 CJ9 . . . D 2 -2.388 -12.291 -11.817 1 25.8 ? C14 CJ9 200 B 1 
HETATM 15 C C15 CJ9 . . . D 2 -3.332 -12.115 -12.918 1 24.59 ? C15 CJ9 200 B 1 
HETATM 16 C C16 CJ9 . . . D 2 -3.041 -10.983 -13.781 1 27.68 ? C16 CJ9 200 B 1 
HETATM 17 C C17 CJ9 . . . D 2 -1.616 -11.01 -14.336 1 28.59 ? C17 CJ9 200 B 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           17 
#