data_6JVU # _model_server_result.job_id IgJLGxaH1rI9sMGLAZJ_ZA _model_server_result.datetime_utc '2025-01-10 20:17:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jvu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":602}' # _entry.id 6JVU # _exptl.entry_id 6JVU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 121.158 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CYSTEINE _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.62 _cell.angle_gamma 90 _cell.entry_id 6JVU _cell.length_a 68.77 _cell.length_b 110.75 _cell.length_c 101.79 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JVU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 K N N ? 3 L N N ? 3 M N N ? 3 N N N # _chem_comp.formula 'C3 H7 N O2 S' _chem_comp.formula_weight 121.158 _chem_comp.id CYS _chem_comp.mon_nstd_flag y _chem_comp.name CYSTEINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA CYS sing 70 n n N H CYS sing 71 n n N H2 CYS sing 72 n n CA C CYS sing 73 n n CA CB CYS sing 74 n n CA HA CYS sing 75 n n C O CYS doub 76 n n C OXT CYS sing 77 n n CB SG CYS sing 78 n n CB HB2 CYS sing 79 n n CB HB3 CYS sing 80 n n SG HG CYS sing 81 n n OXT HXT CYS sing 82 n n # _atom_sites.entry_id 6JVU _atom_sites.fract_transf_matrix[1][1] 0.014541 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001688 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009029 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00989 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 EDO A 1 301 275 EDO EDO . H 3 CYS A 1 302 601 CYS CYS . I 4 PO4 A 1 303 2 PO4 PO4 . J 3 CYS B 1 701 701 CYS CYS . K 3 CYS C 1 501 501 CYS CYS . L 3 CYS D 1 501 501 CYS CYS . M 3 CYS E 1 601 601 CYS CYS . N 3 CYS E 1 602 701 CYS CYS . O 4 PO4 E 1 603 1 PO4 PO4 . P 5 HOH A 1 401 46 HOH HOH . P 5 HOH A 2 402 49 HOH HOH . P 5 HOH A 3 403 45 HOH HOH . P 5 HOH A 4 404 50 HOH HOH . P 5 HOH A 5 405 75 HOH HOH . P 5 HOH A 6 406 40 HOH HOH . P 5 HOH A 7 407 55 HOH HOH . P 5 HOH A 8 408 48 HOH HOH . P 5 HOH A 9 409 54 HOH HOH . P 5 HOH A 10 410 56 HOH HOH . P 5 HOH A 11 411 72 HOH HOH . P 5 HOH A 12 412 73 HOH HOH . Q 5 HOH B 1 801 32 HOH HOH . Q 5 HOH B 2 802 33 HOH HOH . Q 5 HOH B 3 803 53 HOH HOH . Q 5 HOH B 4 804 27 HOH HOH . Q 5 HOH B 5 805 35 HOH HOH . Q 5 HOH B 6 806 30 HOH HOH . Q 5 HOH B 7 807 28 HOH HOH . Q 5 HOH B 8 808 60 HOH HOH . Q 5 HOH B 9 809 76 HOH HOH . Q 5 HOH B 10 810 77 HOH HOH . Q 5 HOH B 11 811 74 HOH HOH . Q 5 HOH B 12 812 58 HOH HOH . Q 5 HOH B 13 813 36 HOH HOH . Q 5 HOH B 14 814 38 HOH HOH . R 5 HOH C 1 601 78 HOH HOH . R 5 HOH C 2 602 42 HOH HOH . R 5 HOH C 3 603 43 HOH HOH . S 5 HOH D 1 601 13 HOH HOH . S 5 HOH D 2 602 9 HOH HOH . S 5 HOH D 3 603 63 HOH HOH . S 5 HOH D 4 604 62 HOH HOH . S 5 HOH D 5 605 71 HOH HOH . S 5 HOH D 6 606 70 HOH HOH . T 5 HOH E 1 701 16 HOH HOH . T 5 HOH E 2 702 14 HOH HOH . T 5 HOH E 3 703 19 HOH HOH . T 5 HOH E 4 704 22 HOH HOH . T 5 HOH E 5 705 26 HOH HOH . U 5 HOH F 1 301 65 HOH HOH . U 5 HOH F 2 302 2 HOH HOH . U 5 HOH F 3 303 3 HOH HOH . U 5 HOH F 4 304 67 HOH HOH . U 5 HOH F 5 305 57 HOH HOH . U 5 HOH F 6 306 59 HOH HOH . U 5 HOH F 7 307 64 HOH HOH . U 5 HOH F 8 308 61 HOH HOH . U 5 HOH F 9 309 68 HOH HOH . U 5 HOH F 10 310 69 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N CYS . . . N 3 -27.938 -11.401 -51.257 1 115.57 ? N CYS 602 E 1 HETATM 2 C CA CYS . . . N 3 -27.672 -10.447 -52.356 1 122.88 ? CA CYS 602 E 1 HETATM 3 C C CYS . . . N 3 -26.791 -9.258 -51.96 1 124.78 ? C CYS 602 E 1 HETATM 4 O O CYS . . . N 3 -25.873 -8.921 -52.817 1 130.67 ? O CYS 602 E 1 HETATM 5 C CB CYS . . . N 3 -28.996 -9.952 -53.011 1 124.62 ? CB CYS 602 E 1 HETATM 6 S SG CYS . . . N 3 -30.282 -9.528 -51.744 1 118.18 ? SG CYS 602 E 1 HETATM 7 O OXT CYS . . . N 3 -27.008 -8.63 -50.853 1 120.27 ? OXT CYS 602 E 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #