data_6JW9 # _model_server_result.job_id VTpd-vfJlsO74iiSeyAGlQ _model_server_result.datetime_utc '2025-08-03 06:01:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6jw9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6JW9 # _exptl.entry_id 6JW9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 360.429 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6JW9 _cell.length_a 115.269 _cell.length_b 115.269 _cell.length_c 242.005 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6JW9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 39 A CYS 39 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf2 A SG CYS 73 A CYS 73 1_555 A SG CYS 114 A CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf3 A SG CYS 99 A CYS 99 1_555 A SG CYS 119 A CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf4 A SG CYS 168 A CYS 168 1_555 A SG CYS 229 A CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf5 B SG CYS 39 B CYS 39 1_555 B SG CYS 80 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 B SG CYS 73 B CYS 73 1_555 B SG CYS 114 B CYS 114 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf7 B SG CYS 99 B CYS 99 1_555 B SG CYS 119 B CYS 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf8 B SG CYS 168 B CYS 168 1_555 B SG CYS 229 B CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? # _chem_comp.formula 'C15 H30 N5 O5 1' _chem_comp.formula_weight 360.429 _chem_comp.id E64 _chem_comp.mon_nstd_flag . _chem_comp.name N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 E64 doub 83 n n C1 O2 E64 sing 84 n n C1 C2 E64 sing 85 n n O2 HO2 E64 sing 86 n n C2 C3 E64 sing 87 n n C2 H21 E64 sing 88 n n C2 H22 E64 sing 89 n n C3 O3 E64 sing 90 n n C3 C4 E64 sing 91 n n C3 H3 E64 sing 92 n n O3 HO3 E64 sing 93 n n C4 O4 E64 doub 94 n n C4 N1 E64 sing 95 n n N1 C6 E64 sing 96 n n N1 HN1 E64 sing 97 n n C6 C7 E64 sing 98 n n C6 C11 E64 sing 99 n n C6 H6 E64 sing 100 n n C7 C8 E64 sing 101 n n C7 H71 E64 sing 102 n n C7 H72 E64 sing 103 n n C8 C9 E64 sing 104 n n C8 C10 E64 sing 105 n n C8 H8 E64 sing 106 n n C9 H91 E64 sing 107 n n C9 H92 E64 sing 108 n n C9 H93 E64 sing 109 n n C10 H101 E64 sing 110 n n C10 H102 E64 sing 111 n n C10 H103 E64 sing 112 n n C11 O5 E64 doub 113 n n C11 N2 E64 sing 114 n n N2 C12 E64 sing 115 n n N2 HN2 E64 sing 116 n n C12 C13 E64 sing 117 n n C12 H121 E64 sing 118 n n C12 H122 E64 sing 119 n n C13 C14 E64 sing 120 n n C13 H131 E64 sing 121 n n C13 H132 E64 sing 122 n n C14 C15 E64 sing 123 n n C14 H141 E64 sing 124 n n C14 H142 E64 sing 125 n n C15 N3 E64 sing 126 n n C15 H151 E64 sing 127 n n C15 H152 E64 sing 128 n n N3 C16 E64 sing 129 n n N3 HN3 E64 sing 130 n n C16 N4 E64 sing 131 n n C16 N5 E64 doub 132 n n N4 HN41 E64 sing 133 n n N4 HN42 E64 sing 134 n n N5 HN51 E64 sing 135 n n N5 HN52 E64 sing 136 n n # _atom_sites.entry_id 6JW9 _atom_sites.fract_transf_matrix[1][1] 0.008675 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008675 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004132 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E64 A 1 301 1 E64 E64 . D 3 HOH A 1 401 20 HOH HOH . D 3 HOH A 2 402 22 HOH HOH . D 3 HOH A 3 403 27 HOH HOH . D 3 HOH A 4 404 1 HOH HOH . D 3 HOH A 5 405 31 HOH HOH . D 3 HOH A 6 406 17 HOH HOH . D 3 HOH A 7 407 24 HOH HOH . D 3 HOH A 8 408 33 HOH HOH . D 3 HOH A 9 409 16 HOH HOH . D 3 HOH A 10 410 4 HOH HOH . D 3 HOH A 11 411 23 HOH HOH . D 3 HOH A 12 412 11 HOH HOH . D 3 HOH A 13 413 2 HOH HOH . D 3 HOH A 14 414 3 HOH HOH . D 3 HOH A 15 415 19 HOH HOH . D 3 HOH A 16 416 29 HOH HOH . D 3 HOH A 17 417 5 HOH HOH . D 3 HOH A 18 418 25 HOH HOH . D 3 HOH A 19 419 14 HOH HOH . D 3 HOH A 20 420 9 HOH HOH . D 3 HOH A 21 421 18 HOH HOH . D 3 HOH A 22 422 34 HOH HOH . D 3 HOH A 23 423 30 HOH HOH . D 3 HOH A 24 424 21 HOH HOH . D 3 HOH A 25 425 12 HOH HOH . D 3 HOH A 26 426 28 HOH HOH . E 3 HOH B 1 301 13 HOH HOH . E 3 HOH B 2 302 8 HOH HOH . E 3 HOH B 3 303 32 HOH HOH . E 3 HOH B 4 304 7 HOH HOH . E 3 HOH B 5 305 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 E64 . . . C 2 -12.893 18.979 -39.704 1 97.72 ? C1 E64 301 A 1 HETATM 2 O O1 E64 . . . C 2 -12.333 19.403 -40.749 1 108.6 ? O1 E64 301 A 1 HETATM 3 O O2 E64 . . . C 2 -13.93 19.579 -39.302 1 88.41 ? O2 E64 301 A 1 HETATM 4 C C2 E64 . . . C 2 -12.365 17.752 -38.938 1 105.03 ? C2 E64 301 A 1 HETATM 5 C C3 E64 . . . C 2 -10.983 17.275 -39.401 1 116.77 ? C3 E64 301 A 1 HETATM 6 O O3 E64 . . . C 2 -10.049 18.305 -39.197 1 115.36 ? O3 E64 301 A 1 HETATM 7 C C4 E64 . . . C 2 -10.985 16.859 -40.881 1 134.42 ? C4 E64 301 A 1 HETATM 8 O O4 E64 . . . C 2 -10.843 17.694 -41.714 1 142.89 ? O4 E64 301 A 1 HETATM 9 N N1 E64 . . . C 2 -11.153 15.476 -41.33 1 129.17 ? N1 E64 301 A 1 HETATM 10 C C6 E64 . . . C 2 -11.322 14.331 -40.437 1 115.93 ? C6 E64 301 A 1 HETATM 11 C C7 E64 . . . C 2 -12.527 13.388 -40.668 1 109.99 ? C7 E64 301 A 1 HETATM 12 C C8 E64 . . . C 2 -12.22 11.913 -40.381 1 129.29 ? C8 E64 301 A 1 HETATM 13 C C9 E64 . . . C 2 -11.496 11.233 -41.547 1 136.81 ? C9 E64 301 A 1 HETATM 14 C C10 E64 . . . C 2 -13.53 11.156 -40.176 1 101.88 ? C10 E64 301 A 1 HETATM 15 C C11 E64 . . . C 2 -10.074 13.912 -39.64 1 105.76 ? C11 E64 301 A 1 HETATM 16 O O5 E64 . . . C 2 -10.028 14.102 -38.474 1 121.58 ? O5 E64 301 A 1 HETATM 17 N N2 E64 . . . C 2 -8.948 13.313 -40.345 1 127.92 ? N2 E64 301 A 1 HETATM 18 C C12 E64 . . . C 2 -7.729 12.913 -39.657 1 153.44 ? C12 E64 301 A 1 HETATM 19 C C13 E64 . . . C 2 -7.988 11.886 -38.552 1 141.08 ? C13 E64 301 A 1 HETATM 20 C C14 E64 . . . C 2 -6.714 11.65 -37.736 1 137.32 ? C14 E64 301 A 1 HETATM 21 C C15 E64 . . . C 2 -6.679 12.537 -36.49 1 121.32 ? C15 E64 301 A 1 HETATM 22 N N3 E64 . . . C 2 -6.538 13.938 -36.87 1 109.54 ? N3 E64 301 A 1 HETATM 23 C C16 E64 . . . C 2 -5.317 14.696 -36.627 1 110.51 ? C16 E64 301 A 1 HETATM 24 N N4 E64 . . . C 2 -4.167 14.084 -35.982 1 108.4 ? N4 E64 301 A 1 HETATM 25 N N5 E64 . . . C 2 -5.256 15.901 -36.978 1 118.22 ? N5 E64 301 A 1 # _model_server_stats.io_time_ms 46 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #